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The map label for this gene is pecT [H]

Identifier: 189353644

GI number: 189353644

Start: 1904018

End: 1904869

Strand: Direct

Name: pecT [H]

Synonym: BMULJ_04889

Alternate gene names: 189353644

Gene position: 1904018-1904869 (Clockwise)

Preceding gene: 189353639

Following gene: 189353650

Centisome position: 76.99

GC content: 64.55

Gene sequence:

>852_bases
ATGCCGCGCACCCTGGACGTCGACCTGCTGCGTACTTTCCACGCCGTCGCGAAGCTCGGCCGTTTCAAGGATGCGGCCGT
TCATGTGAACCGCAGCCCGTCGTCCGTCACGGCGCAGATTCAAAAGCTGGAGGAGATGGTCGCGCAGCGGCTGTTTACGC
GAAACAATCAGGCGGTCGAACTCACGCAGTTCGGCCACAAGCTGCTGAGCGACACCACCGAGTTTTTGCAGAGCCACGAC
CGGCTCGTCGAATCGCTGTCGCCGCAGATGTTGACCGGCAAGCTCCGGCTCGGCATCCCCGATTCCTACGCGGCGCACTT
CATGGCGGAATTCCTTCCGCGCTTCGCCGCCGACCGGCCGCTGCTCGAACTGACGGTCGAAGCGCGCTCCAGCGAAGAGT
TGCTGATGCTGTTTTCGCGCGGCCAGCTCGACATCACGATCGCCGTGGTGCCGAAAGCGCTGCCGCACGCCGAACTGCTC
GGCAAGACGCATCCGGTGTGGGTCGCCGCGCGCACCTTCAAGTTCAATCCCGATGCGCCGCTGCCGATTGCGGTTCAACT
GCAGGGCTGTCCGTACCGCGACACGGCGCTGCGTGCGCTGAAGAAGGCGAAGATCGCGCACCGGCTACTGCTCGAAAGCG
CCAGCTCGCCCGCGGTGGAGGCCTGTATCGCGAACGGCCTGGCGGTCGGCCTGATCGAGCACGATCGCGTGTCGGGCAAT
CTGACGAGCCGCGTCGCCGGGATCGTGCTGCCCGATCTGCCGCCGCATCTGATCACGGTACTGACGGACGAAAGCAATCG
CGCCGCGCTGCATCTGCGCGACGTACTGAAAAGCACGTTCAGGATCGGATAA

Upstream 100 bases:

>100_bases
CGGCTGCCTGCCGTTGTCTACCTGTTGACCCGAGGATAGGGATGCCCAATAATTCCGTCAATCGACATTACCTGAATCAC
TGATTCGGAAAATATAAATC

Downstream 100 bases:

>100_bases
GGAAGGCAAGGCCGGAATCGGCCTTGCAGGCAGAACAAACAGCCGGGCAAGAACTGCCGCCGGCCCATTGCAGGCCGGCG
GCGTACTTCGTCACCCGCCC

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: Pectinase gene transcriptional regulator [H]

Number of amino acids: Translated: 283; Mature: 282

Protein sequence:

>283_residues
MPRTLDVDLLRTFHAVAKLGRFKDAAVHVNRSPSSVTAQIQKLEEMVAQRLFTRNNQAVELTQFGHKLLSDTTEFLQSHD
RLVESLSPQMLTGKLRLGIPDSYAAHFMAEFLPRFAADRPLLELTVEARSSEELLMLFSRGQLDITIAVVPKALPHAELL
GKTHPVWVAARTFKFNPDAPLPIAVQLQGCPYRDTALRALKKAKIAHRLLLESASSPAVEACIANGLAVGLIEHDRVSGN
LTSRVAGIVLPDLPPHLITVLTDESNRAALHLRDVLKSTFRIG

Sequences:

>Translated_283_residues
MPRTLDVDLLRTFHAVAKLGRFKDAAVHVNRSPSSVTAQIQKLEEMVAQRLFTRNNQAVELTQFGHKLLSDTTEFLQSHD
RLVESLSPQMLTGKLRLGIPDSYAAHFMAEFLPRFAADRPLLELTVEARSSEELLMLFSRGQLDITIAVVPKALPHAELL
GKTHPVWVAARTFKFNPDAPLPIAVQLQGCPYRDTALRALKKAKIAHRLLLESASSPAVEACIANGLAVGLIEHDRVSGN
LTSRVAGIVLPDLPPHLITVLTDESNRAALHLRDVLKSTFRIG
>Mature_282_residues
PRTLDVDLLRTFHAVAKLGRFKDAAVHVNRSPSSVTAQIQKLEEMVAQRLFTRNNQAVELTQFGHKLLSDTTEFLQSHDR
LVESLSPQMLTGKLRLGIPDSYAAHFMAEFLPRFAADRPLLELTVEARSSEELLMLFSRGQLDITIAVVPKALPHAELLG
KTHPVWVAARTFKFNPDAPLPIAVQLQGCPYRDTALRALKKAKIAHRLLLESASSPAVEACIANGLAVGLIEHDRVSGNL
TSRVAGIVLPDLPPHLITVLTDESNRAALHLRDVLKSTFRIG

Specific function: Regulates pectinase gene expression [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788626, Length=271, Percent_Identity=32.1033210332103, Blast_Score=105, Evalue=4e-24,
Organism=Escherichia coli, GI1790208, Length=155, Percent_Identity=30.3225806451613, Blast_Score=62, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 31203; Mature: 31071

Theoretical pI: Translated: 9.61; Mature: 9.61

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRTLDVDLLRTFHAVAKLGRFKDAAVHVNRSPSSVTAQIQKLEEMVAQRLFTRNNQAVE
CCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCEEE
LTQFGHKLLSDTTEFLQSHDRLVESLSPQMLTGKLRLGIPDSYAAHFMAEFLPRFAADRP
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEECEEEECCCHHHHHHHHHHHHHHHHCCCC
LLELTVEARSSEELLMLFSRGQLDITIAVVPKALPHAELLGKTHPVWVAARTFKFNPDAP
EEEEEEECCCCCCEEEEEECCCEEEEEEECCCCCCCHHHHCCCCCEEEEEEEEEECCCCC
LPIAVQLQGCPYRDTALRALKKAKIAHRLLLESASSPAVEACIANGLAVGLIEHDRVSGN
CEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCEEEEEECCCCCCC
LTSRVAGIVLPDLPPHLITVLTDESNRAALHLRDVLKSTFRIG
HHHHHHHEECCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PRTLDVDLLRTFHAVAKLGRFKDAAVHVNRSPSSVTAQIQKLEEMVAQRLFTRNNQAVE
CCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCEEE
LTQFGHKLLSDTTEFLQSHDRLVESLSPQMLTGKLRLGIPDSYAAHFMAEFLPRFAADRP
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEECEEEECCCHHHHHHHHHHHHHHHHCCCC
LLELTVEARSSEELLMLFSRGQLDITIAVVPKALPHAELLGKTHPVWVAARTFKFNPDAP
EEEEEEECCCCCCEEEEEECCCEEEEEEECCCCCCCHHHHCCCCCEEEEEEEEEECCCCC
LPIAVQLQGCPYRDTALRALKKAKIAHRLLLESASSPAVEACIANGLAVGLIEHDRVSGN
CEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCEEEEEECCCCCCC
LTSRVAGIVLPDLPPHLITVLTDESNRAALHLRDVLKSTFRIG
HHHHHHHEECCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8626286 [H]