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The map label for this gene is hrpA [H]

Identifier: 189353532

GI number: 189353532

Start: 1767632

End: 1769668

Strand: Reverse

Name: hrpA [H]

Synonym: BMULJ_04776

Alternate gene names: 189353532

Gene position: 1769668-1767632 (Counterclockwise)

Preceding gene: 189353533

Following gene: 189353531

Centisome position: 71.55

GC content: 68.24

Gene sequence:

>2037_bases
ATGCGTCGACGCGTCGTCCCGATCCGGTTTCAGCCGCGCAGCCTGCCGCGCGCGGCGCTCGCGATGTGCGCGAGCGCGCT
GCTTGCGGCGTCGCTCTGCATGACGATCGCGCAGCCCGCGCGCGCGGCCGACCTGCGCTGGCGCAACAAGCCGTTCACGA
TCGTCGCGAACGGCAAGAAGATCGGCGACTTCATTCGCGAGCTCGCGTCGTCGCAGGGCGTGACGGCCGTCGTCGATCCG
AAGGTCGACGGCGTGATCAGCGGCCGCTTCTCGGGCACGCCGCAGCAGACGCTCGACACGATCTGCTCGACGTACGGACT
CACGTGGTACTACGACGGCTCGTTCCTCTACGTCGATCCGGCCGACCAGTCGCAGACGCAGATGATCCCGATTCCGCCGA
ACGCGGGCGGCGAGATCGGCCGCGCGCTGCAGGCGATGCAGATTCCCGACAAGCGCTACACGCTCGTCATCAACGATCGC
GCGAACAGCGTGTACGTGGCCGGCCCGCGCCGCTACGTCGAGCTCGTGCGGCAGGCGATTGGCAGCGTCGGCGATCCGTC
GGCGAACGGCCAGCACGCGGACATCCGCGCGTTCCGGCTCAAGTACGCGTGGGCGTCCGACTTCACGATCAATCGCTCGG
GCAAGGAAGTGACGGTGCCGGGCGTCGCGACCATCCTGCGCCGGCTGTTCGGCAAGGGCGGCGGCACGGGGCCGATGCCG
ACGAGCGCGCCGCTCGGCCAGGCCGCGCGTCAGGTGAAGCTCGGCTCGGGGCTGACAATCGCGGTGCCGCGCCTCGAATT
CCCCGATCTGTCGGGCGGCCCGCGCAGCGGCGGCTACGGCGGCGAATCGGCCGCGGGCAGCACGTTCTCGCCGTTCGCGA
GCGGCGGCGACACGCTGCCGCAGATCGAGGCCGATCCGGCGATCAACGCGGTGATCGTGCGCGATCTGCCCGAGAACATG
TACCGCTACCAGTCGCTGATCGCGCAGCTCGACGAGCGGCCGCGGATCGTCGAGATCAACGTGACGATCATCGACATCAA
CGAGGATTCGCTCGACAGCCTCGGGATCGACTGGCGGCTGCACACGACGCACGGCGACGTGCAGATCGGCAACGGCGCGA
ACCCGCTGAACGGCAACACGCAGTACAACGGCGCCGGCAATCCGCCGCTGACGTTCGGGATCGGCGCGAGCGAGTCCGGG
CAGACGGGCACCTTCATGCCGACCGGCATCGCGCTCACCGCATCGATCGGCGGATCGCTGCGCAACTACCTGCTCACGCG
CGTGAATGCGCTCGCGCAGAAGGGGCAGGCGCAGCTGCATTCGAAGCCGAAGGTGCTCGCGCTCGACAACACCGAGGCGA
TTCTCGAGAACCTCACGCAGTTCTACGTGCAGGTGCAGGGCTATCAGGATTCGTCGCTGTACAGCGTGACGACCGGCACG
AGCATCAAGGTGACGCCGATGATCGTCGACGATGCGATCCGCAATGCGGCCGCCGTGTCGGGCCGTCCGGAAAGCGTGAT
GATGTCGATCGACATCCAGGACGGCAACATCGTGCCGGGGCAGGCGGTGTCGAACGTGCCGGTGATCCAGCAGCGCAACA
TCGTCACGAAGACGATGATCGACGAGGGCAAGAGCCTGCTGATCGCGGGCTTCAACGACGACGAGGTGCGCCTGAACAAG
AGCGGCGTGCCCTGGCTGTCCGACATTCCGCTGATCGGCAACCTGTTCAAGTACACCGACAAGTCCGGCAACCACATGGA
GCGCTTCTATCTGCTGACGCCGCGCGTGGTGTCGAGCGCGTCGATGTACGCGCCGGACGGCTCGCCGGTGAACCCGGGCG
TCGATGCGCCGGCCGACCCGAACGGCGTGTCGATGTACCGGCCGCCCGACAACGACATCGCGGTGCCGCTGACGCCGCGC
CCGCTGCCCGGCACGAAGTTCGGGCCGCCCGCGCTGCCGCCGCCCGCGCAGGATGCGGCGTCGCAGCCGATGGCGACGAC
CGCAGGAGCGTCCGCCCATGTCGACGAGCATCATTGA

Upstream 100 bases:

>100_bases
TCGCGCTGGTGCTGCTGTCCGGCTGGCTCGGCAGCGAGGTGCTGCGCTTTGCGCAGCAGGCGCTCGAACGGATGTTCGTT
TCTTCCACAGGAGTGTTTTG

Downstream 100 bases:

>100_bases
ACCGCACAGCGACGGCGCATTGCCCGGCGGGGCGGGCAGCGGCGCGGCCGCGCTCGCGTCGCCGTGGAATCTCTGCTTTC
TGAGCGGCCCGATGTACGGC

Product: putative type II secretory pathway

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 678; Mature: 678

Protein sequence:

>678_residues
MRRRVVPIRFQPRSLPRAALAMCASALLAASLCMTIAQPARAADLRWRNKPFTIVANGKKIGDFIRELASSQGVTAVVDP
KVDGVISGRFSGTPQQTLDTICSTYGLTWYYDGSFLYVDPADQSQTQMIPIPPNAGGEIGRALQAMQIPDKRYTLVINDR
ANSVYVAGPRRYVELVRQAIGSVGDPSANGQHADIRAFRLKYAWASDFTINRSGKEVTVPGVATILRRLFGKGGGTGPMP
TSAPLGQAARQVKLGSGLTIAVPRLEFPDLSGGPRSGGYGGESAAGSTFSPFASGGDTLPQIEADPAINAVIVRDLPENM
YRYQSLIAQLDERPRIVEINVTIIDINEDSLDSLGIDWRLHTTHGDVQIGNGANPLNGNTQYNGAGNPPLTFGIGASESG
QTGTFMPTGIALTASIGGSLRNYLLTRVNALAQKGQAQLHSKPKVLALDNTEAILENLTQFYVQVQGYQDSSLYSVTTGT
SIKVTPMIVDDAIRNAAAVSGRPESVMMSIDIQDGNIVPGQAVSNVPVIQQRNIVTKTMIDEGKSLLIAGFNDDEVRLNK
SGVPWLSDIPLIGNLFKYTDKSGNHMERFYLLTPRVVSSASMYAPDGSPVNPGVDAPADPNGVSMYRPPDNDIAVPLTPR
PLPGTKFGPPALPPPAQDAASQPMATTAGASAHVDEHH

Sequences:

>Translated_678_residues
MRRRVVPIRFQPRSLPRAALAMCASALLAASLCMTIAQPARAADLRWRNKPFTIVANGKKIGDFIRELASSQGVTAVVDP
KVDGVISGRFSGTPQQTLDTICSTYGLTWYYDGSFLYVDPADQSQTQMIPIPPNAGGEIGRALQAMQIPDKRYTLVINDR
ANSVYVAGPRRYVELVRQAIGSVGDPSANGQHADIRAFRLKYAWASDFTINRSGKEVTVPGVATILRRLFGKGGGTGPMP
TSAPLGQAARQVKLGSGLTIAVPRLEFPDLSGGPRSGGYGGESAAGSTFSPFASGGDTLPQIEADPAINAVIVRDLPENM
YRYQSLIAQLDERPRIVEINVTIIDINEDSLDSLGIDWRLHTTHGDVQIGNGANPLNGNTQYNGAGNPPLTFGIGASESG
QTGTFMPTGIALTASIGGSLRNYLLTRVNALAQKGQAQLHSKPKVLALDNTEAILENLTQFYVQVQGYQDSSLYSVTTGT
SIKVTPMIVDDAIRNAAAVSGRPESVMMSIDIQDGNIVPGQAVSNVPVIQQRNIVTKTMIDEGKSLLIAGFNDDEVRLNK
SGVPWLSDIPLIGNLFKYTDKSGNHMERFYLLTPRVVSSASMYAPDGSPVNPGVDAPADPNGVSMYRPPDNDIAVPLTPR
PLPGTKFGPPALPPPAQDAASQPMATTAGASAHVDEHH
>Mature_678_residues
MRRRVVPIRFQPRSLPRAALAMCASALLAASLCMTIAQPARAADLRWRNKPFTIVANGKKIGDFIRELASSQGVTAVVDP
KVDGVISGRFSGTPQQTLDTICSTYGLTWYYDGSFLYVDPADQSQTQMIPIPPNAGGEIGRALQAMQIPDKRYTLVINDR
ANSVYVAGPRRYVELVRQAIGSVGDPSANGQHADIRAFRLKYAWASDFTINRSGKEVTVPGVATILRRLFGKGGGTGPMP
TSAPLGQAARQVKLGSGLTIAVPRLEFPDLSGGPRSGGYGGESAAGSTFSPFASGGDTLPQIEADPAINAVIVRDLPENM
YRYQSLIAQLDERPRIVEINVTIIDINEDSLDSLGIDWRLHTTHGDVQIGNGANPLNGNTQYNGAGNPPLTFGIGASESG
QTGTFMPTGIALTASIGGSLRNYLLTRVNALAQKGQAQLHSKPKVLALDNTEAILENLTQFYVQVQGYQDSSLYSVTTGT
SIKVTPMIVDDAIRNAAAVSGRPESVMMSIDIQDGNIVPGQAVSNVPVIQQRNIVTKTMIDEGKSLLIAGFNDDEVRLNK
SGVPWLSDIPLIGNLFKYTDKSGNHMERFYLLTPRVVSSASMYAPDGSPVNPGVDAPADPNGVSMYRPPDNDIAVPLTPR
PLPGTKFGPPALPPPAQDAASQPMATTAGASAHVDEHH

Specific function: Involved in the secretion of a proteinaceous elicitor of the hypersensitivity response in plants [H]

COG id: COG1450

COG function: function code NU; Type II secretory pathway, component PulD

Gene ontology:

Cell location: Cell outer membrane; Peripheral membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP D family [H]

Homologues:

Organism=Escherichia coli, GI1789793, Length=304, Percent_Identity=25.6578947368421, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI87082242, Length=648, Percent_Identity=20.9876543209877, Blast_Score=70, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005644
- InterPro:   IPR004846
- InterPro:   IPR004845
- InterPro:   IPR003522 [H]

Pfam domain/function: PF00263 Secretin; PF03958 Secretin_N [H]

EC number: NA

Molecular weight: Translated: 72250; Mature: 72250

Theoretical pI: Translated: 7.25; Mature: 7.25

Prosite motif: PS00875 T2SP_D

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRRVVPIRFQPRSLPRAALAMCASALLAASLCMTIAQPARAADLRWRNKPFTIVANGKK
CCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHCCCEECCCCEEEEECCHH
IGDFIRELASSQGVTAVVDPKVDGVISGRFSGTPQQTLDTICSTYGLTWYYDGSFLYVDP
HHHHHHHHHHCCCCEEEECCCCCCEEECCCCCCHHHHHHHHHHHCCCEEEECCEEEEECC
ADQSQTQMIPIPPNAGGEIGRALQAMQIPDKRYTLVINDRANSVYVAGPRRYVELVRQAI
CCCCCCEEEECCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCEEEEECCHHHHHHHHHHH
GSVGDPSANGQHADIRAFRLKYAWASDFTINRSGKEVTVPGVATILRRLFGKGGGTGPMP
CCCCCCCCCCCCCCEEEEEEEEEEECCEEEECCCCEEECCHHHHHHHHHHCCCCCCCCCC
TSAPLGQAARQVKLGSGLTIAVPRLEFPDLSGGPRSGGYGGESAAGSTFSPFASGGDTLP
CCCCHHHHHHHEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
QIEADPAINAVIVRDLPENMYRYQSLIAQLDERPRIVEINVTIIDINEDSLDSLGIDWRL
CCCCCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCHHHCCCEEEE
HTTHGDVQIGNGANPLNGNTQYNGAGNPPLTFGIGASESGQTGTFMPTGIALTASIGGSL
ECCCCCEEECCCCCCCCCCCEECCCCCCCEEEECCCCCCCCCCCEECCCEEEEEHHHHHH
RNYLLTRVNALAQKGQAQLHSKPKVLALDNTEAILENLTQFYVQVQGYQDSSLYSVTTGT
HHHHHHHHHHHHHCCHHHHCCCCCEEEECCHHHHHHHHHHHEEEEECCCCCCEEEEECCC
SIKVTPMIVDDAIRNAAAVSGRPESVMMSIDIQDGNIVPGQAVSNVPVIQQRNIVTKTMI
EEEEEEEEHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEECCCCHHHHHH
DEGKSLLIAGFNDDEVRLNKSGVPWLSDIPLIGNLFKYTDKSGNHMERFYLLTPRVVSSA
HCCCEEEEECCCCCCEEECCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEEEECCHHHCCC
SMYAPDGSPVNPGVDAPADPNGVSMYRPPDNDIAVPLTPRPLPGTKFGPPALPPPAQDAA
EEECCCCCCCCCCCCCCCCCCCEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHH
SQPMATTAGASAHVDEHH
CCCCEECCCCCCCCCCCC
>Mature Secondary Structure
MRRRVVPIRFQPRSLPRAALAMCASALLAASLCMTIAQPARAADLRWRNKPFTIVANGKK
CCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHCCCEECCCCEEEEECCHH
IGDFIRELASSQGVTAVVDPKVDGVISGRFSGTPQQTLDTICSTYGLTWYYDGSFLYVDP
HHHHHHHHHHCCCCEEEECCCCCCEEECCCCCCHHHHHHHHHHHCCCEEEECCEEEEECC
ADQSQTQMIPIPPNAGGEIGRALQAMQIPDKRYTLVINDRANSVYVAGPRRYVELVRQAI
CCCCCCEEEECCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCEEEEECCHHHHHHHHHHH
GSVGDPSANGQHADIRAFRLKYAWASDFTINRSGKEVTVPGVATILRRLFGKGGGTGPMP
CCCCCCCCCCCCCCEEEEEEEEEEECCEEEECCCCEEECCHHHHHHHHHHCCCCCCCCCC
TSAPLGQAARQVKLGSGLTIAVPRLEFPDLSGGPRSGGYGGESAAGSTFSPFASGGDTLP
CCCCHHHHHHHEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
QIEADPAINAVIVRDLPENMYRYQSLIAQLDERPRIVEINVTIIDINEDSLDSLGIDWRL
CCCCCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCHHHCCCEEEE
HTTHGDVQIGNGANPLNGNTQYNGAGNPPLTFGIGASESGQTGTFMPTGIALTASIGGSL
ECCCCCEEECCCCCCCCCCCEECCCCCCCEEEECCCCCCCCCCCEECCCEEEEEHHHHHH
RNYLLTRVNALAQKGQAQLHSKPKVLALDNTEAILENLTQFYVQVQGYQDSSLYSVTTGT
HHHHHHHHHHHHHCCHHHHCCCCCEEEECCHHHHHHHHHHHEEEEECCCCCCEEEEECCC
SIKVTPMIVDDAIRNAAAVSGRPESVMMSIDIQDGNIVPGQAVSNVPVIQQRNIVTKTMI
EEEEEEEEHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEECCCCHHHHHH
DEGKSLLIAGFNDDEVRLNKSGVPWLSDIPLIGNLFKYTDKSGNHMERFYLLTPRVVSSA
HCCCEEEEECCCCCCEEECCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEEEECCHHHCCC
SMYAPDGSPVNPGVDAPADPNGVSMYRPPDNDIAVPLTPRPLPGTKFGPPALPPPAQDAA
EEECCCCCCCCCCCCCCCCCCCEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHH
SQPMATTAGASAHVDEHH
CCCCEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1472716; 7623665; 11823852 [H]