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The map label for this gene is yscT [H]

Identifier: 189353523

GI number: 189353523

Start: 1760145

End: 1760957

Strand: Reverse

Name: yscT [H]

Synonym: BMULJ_04767

Alternate gene names: 189353523

Gene position: 1760957-1760145 (Counterclockwise)

Preceding gene: 189353524

Following gene: 189353522

Centisome position: 71.2

GC content: 67.77

Gene sequence:

>813_bases
ATGCTAGATCACGCGTCGGGCTTCAACGACCTCGCCGGCACGCTGCGGCCGCTGCTGTACGTGATGCCGCGCCTGCTGCC
GATCATGTTCGTCGTGCCGGTATTCAACGAGCAGATCGTCACGGGCCTCGTGCGTAACGGCCTCGCGGTCGTGATCGCCG
CGTTCGTCGCGCCCGCGATCGATGCCGCGCAGATCGCGTCGCTGCCGTTCGTCACGTGGTGCGTGCTCGTCGCGAAAGAG
GCGATGGTCGGGATGCTGCTCGCCGGTGCGTTCAGCGCGGTGCTGTTCGCGATCCAGGGCGTCGGCTACCTGATCGACTT
CCAGACCGGCAGCGGCAGCGCCGCGTTCTTCGATCCGATGGGCGGCCACGAAGGCGGTCCGACGTCGGGATTCCTGAACT
TCGTCGCGATCGCGCTGTTCGTCACGGCGGGCGGGCTGCAGGTGCTCGTGCAGCTGTTCGCGCAGTCGTACGCGTGGTGG
CCGATCGGCTCGCTCGGCCCCGACTTCTCGTCGATGCTGCAGACCTTCGTCGTGCGGCAGACCGACACGATCTTCGAATG
GATGGTGAAGCTCGCGGCGCCGGTGATCATCGTGCTCGTGCTCGTCGAACTCGGCATCGGGCTCGTCGGCCGCGCGGTGC
CGCAGCTCAACGTGTTCGTGTTCTCGCAGCCGCTCAAGAGCGCGCTCGCGGTGCTGATGATGGTGCTGTTCCTGCCGGTC
GTCTATGCGTCGCTGCATGCGCTGCTGAGTCCCGACAGCGGCCTCGTCGCGCTGCTGCGCGCGCTGTTCGCCGCGCACGG
CGGCGGCGCGTGA

Upstream 100 bases:

>100_bases
GCGCCGCCGCGAAACCGTCGGACGCGGTGCAAGCCGGCACGACCGATGCCGCTGCGCAGCCCGCCGCCGCTGCTGCCGCC
GCCGCCGCCGCGGAGCGCCG

Downstream 100 bases:

>100_bases
GCGCGCAGCGCGAAGCGGAGCGCCGATGAGCGAAAAGAACCAGCAGCCGACCGCGAAACGCCTGCGCGAGGCGCGCGAAA
AAGGCGACGTGCCGAAGAGC

Product: type III secretion protein SctT

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 270; Mature: 270

Protein sequence:

>270_residues
MLDHASGFNDLAGTLRPLLYVMPRLLPIMFVVPVFNEQIVTGLVRNGLAVVIAAFVAPAIDAAQIASLPFVTWCVLVAKE
AMVGMLLAGAFSAVLFAIQGVGYLIDFQTGSGSAAFFDPMGGHEGGPTSGFLNFVAIALFVTAGGLQVLVQLFAQSYAWW
PIGSLGPDFSSMLQTFVVRQTDTIFEWMVKLAAPVIIVLVLVELGIGLVGRAVPQLNVFVFSQPLKSALAVLMMVLFLPV
VYASLHALLSPDSGLVALLRALFAAHGGGA

Sequences:

>Translated_270_residues
MLDHASGFNDLAGTLRPLLYVMPRLLPIMFVVPVFNEQIVTGLVRNGLAVVIAAFVAPAIDAAQIASLPFVTWCVLVAKE
AMVGMLLAGAFSAVLFAIQGVGYLIDFQTGSGSAAFFDPMGGHEGGPTSGFLNFVAIALFVTAGGLQVLVQLFAQSYAWW
PIGSLGPDFSSMLQTFVVRQTDTIFEWMVKLAAPVIIVLVLVELGIGLVGRAVPQLNVFVFSQPLKSALAVLMMVLFLPV
VYASLHALLSPDSGLVALLRALFAAHGGGA
>Mature_270_residues
MLDHASGFNDLAGTLRPLLYVMPRLLPIMFVVPVFNEQIVTGLVRNGLAVVIAAFVAPAIDAAQIASLPFVTWCVLVAKE
AMVGMLLAGAFSAVLFAIQGVGYLIDFQTGSGSAAFFDPMGGHEGGPTSGFLNFVAIALFVTAGGLQVLVQLFAQSYAWW
PIGSLGPDFSSMLQTFVVRQTDTIFEWMVKLAAPVIIVLVLVELGIGLVGRAVPQLNVFVFSQPLKSALAVLMMVLFLPV
VYASLHALLSPDSGLVALLRALFAAHGGGA

Specific function: Component of the yop secretion machinery [H]

COG id: COG4791

COG function: function code U; Type III secretory pathway, component EscT

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliR/mopE/spaR family [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002010
- InterPro:   IPR006304 [H]

Pfam domain/function: PF01311 Bac_export_1 [H]

EC number: NA

Molecular weight: Translated: 28449; Mature: 28449

Theoretical pI: Translated: 5.52; Mature: 5.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHCCCCCHHHHHHHHHHHCCCCC
>Mature Secondary Structure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HHHHHHHHHCCCCCHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9746557; 9748454; 11586360 [H]