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The map label for this gene is yscR [C]

Identifier: 189353518

GI number: 189353518

Start: 1741531

End: 1742205

Strand: Direct

Name: yscR [C]

Synonym: BMULJ_04762

Alternate gene names: 189353518

Gene position: 1741531-1742205 (Clockwise)

Preceding gene: 189353517

Following gene: 189353519

Centisome position: 70.42

GC content: 65.93

Gene sequence:

>675_bases
ATGGGCAATCTGCCGAATCCGGTCGCGCTGATCGCGGTCATCGCCGCGCTCGGCATCGCGCCGTTCGCGGCGCTGATGGT
GACGAGCTATACGAAGCTCGTCGTCGTGCTCGGGCTGCTGCGCTCGGCGCTCGGCGTCCAGCAGGTGCCGCCGAATCTCG
TGCTGAACGGCATCGCGCTGATTCTGTCGCTGTTCATCATGGCGCCGGTCGGGATGTCGATCCGCGATGCGCTGCAGGCG
CGCCATTTCGACGCGTCGGGGCAACTGTCGACTGCCGATGTCGGCGCGCTCGCCGATGCCGCGCTGCCGCCGATCAAGGA
TTTCCTCGTGTCGCATACGCGGCAGCGCGACCGCGAATTCTTCGTGCGGACCGCGACGTCGGTCTGGCCGAAGAACCGCG
CGGACGGCATCAAGGACGACGATCTGCTCGTGCTCGTGCCGAGCTTCACGCTCGCCGAGCTGACGAAGGCGTTCCAGATC
GGCTTCGTGATCTACATCGTGTTCATCGTCGTCGATCTGCTGGTCGCCAACATCCTGCTCGCGCTCGGGATGCAGATGAT
CTCGCCGACCACGATCTCGGTGCCGTTCAAGCTGCTGCTGTTCGTCGCGCTCGATGGCTGGTCGCTGCTCGTGCACGGGC
TCGTGCTGTCGTACCGCGTCGCGGGGGCGGGATGA

Upstream 100 bases:

>100_bases
CGGGATGCTGATCGGCACCGGCCATCTGATCGCGGTTGGCCAAAAGCTCGGCGTGCGCGTCGTCACGCTGACGCAACCCG
CGCCGCGCGAGCGCTGAACG

Downstream 100 bases:

>100_bases
ACGCGCGCCGCCTGCACAGCGCAGCCGCCGCGCTATGCGCGACGGTCGCGCTCGTCGCACTGACGTTCGCCTGCGTGCCG
CCGCGCGTCGCGCATGCGCG

Product: type III secretion system protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 224; Mature: 223

Protein sequence:

>224_residues
MGNLPNPVALIAVIAALGIAPFAALMVTSYTKLVVVLGLLRSALGVQQVPPNLVLNGIALILSLFIMAPVGMSIRDALQA
RHFDASGQLSTADVGALADAALPPIKDFLVSHTRQRDREFFVRTATSVWPKNRADGIKDDDLLVLVPSFTLAELTKAFQI
GFVIYIVFIVVDLLVANILLALGMQMISPTTISVPFKLLLFVALDGWSLLVHGLVLSYRVAGAG

Sequences:

>Translated_224_residues
MGNLPNPVALIAVIAALGIAPFAALMVTSYTKLVVVLGLLRSALGVQQVPPNLVLNGIALILSLFIMAPVGMSIRDALQA
RHFDASGQLSTADVGALADAALPPIKDFLVSHTRQRDREFFVRTATSVWPKNRADGIKDDDLLVLVPSFTLAELTKAFQI
GFVIYIVFIVVDLLVANILLALGMQMISPTTISVPFKLLLFVALDGWSLLVHGLVLSYRVAGAG
>Mature_223_residues
GNLPNPVALIAVIAALGIAPFAALMVTSYTKLVVVLGLLRSALGVQQVPPNLVLNGIALILSLFIMAPVGMSIRDALQAR
HFDASGQLSTADVGALADAALPPIKDFLVSHTRQRDREFFVRTATSVWPKNRADGIKDDDLLVLVPSFTLAELTKAFQIG
FVIYIVFIVVDLLVANILLALGMQMISPTTISVPFKLLLFVALDGWSLLVHGLVLSYRVAGAG

Specific function: Important for pathogenicity [H]

COG id: COG4790

COG function: function code U; Type III secretory pathway, component EscR

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliP/mopC/spaP family [H]

Homologues:

Organism=Escherichia coli, GI1788259, Length=213, Percent_Identity=40.8450704225352, Blast_Score=154, Evalue=3e-39,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005838
- InterPro:   IPR005773 [H]

Pfam domain/function: PF00813 FliP [H]

EC number: NA

Molecular weight: Translated: 23899; Mature: 23768

Theoretical pI: Translated: 8.98; Mature: 8.98

Prosite motif: PS01061 FLIP_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGNLPNPVALIAVIAALGIAPFAALMVTSYTKLVVVLGLLRSALGVQQVPPNLVLNGIAL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHCCCHHHHHHHHHH
ILSLFIMAPVGMSIRDALQARHFDASGQLSTADVGALADAALPPIKDFLVSHTRQRDREF
HHHHHHHHCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
FVRTATSVWPKNRADGIKDDDLLVLVPSFTLAELTKAFQIGFVIYIVFIVVDLLVANILL
HHHHHHHHCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALGMQMISPTTISVPFKLLLFVALDGWSLLVHGLVLSYRVAGAG
HHHHHHHCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
GNLPNPVALIAVIAALGIAPFAALMVTSYTKLVVVLGLLRSALGVQQVPPNLVLNGIAL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHCCCHHHHHHHHHH
ILSLFIMAPVGMSIRDALQARHFDASGQLSTADVGALADAALPPIKDFLVSHTRQRDREF
HHHHHHHHCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
FVRTATSVWPKNRADGIKDDDLLVLVPSFTLAELTKAFQIGFVIYIVFIVVDLLVANILL
HHHHHHHHCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALGMQMISPTTISVPFKLLLFVALDGWSLLVHGLVLSYRVAGAG
HHHHHHHCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1312532 [H]