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The map label for this gene is sdiA [H]

Identifier: 189353291

GI number: 189353291

Start: 1529857

End: 1530576

Strand: Reverse

Name: sdiA [H]

Synonym: BMULJ_04531

Alternate gene names: 189353291

Gene position: 1530576-1529857 (Counterclockwise)

Preceding gene: 189353295

Following gene: 189353285

Centisome position: 61.89

GC content: 65.14

Gene sequence:

>720_bases
ATGGAACTGCGCTGGCAGGATGCCTACGATGAATTCAGCGCCGCGGAAGACGAGCAGCAGCTCTTCCAGCGGATCGCCGC
CTATTCGAAACGGCTCGGCTTCGAATACTGCTGCTACGGCATCCGTGTGCCGCTGCCCGTGTCGAAGCCGGCGGTCGCGA
TCTTCGACACCTATCCCGACGGCTGGATGGCGCACTATCAGGCGCAGAACTACATCGAGATCGATTCGACGGTGCGCGAC
GGCGCGCTGAGCACGAACATGATCGTCTGGCCCGACGTCGACAAGATCGAGCCCTGTCCGCTGTGGCGCGACGCGCGCGA
TTTCGGGCTGTCGGTCGGCGTCGCGCAGTCGAGCTGGGCGGCGCGCGGCGCATTCGGCCTGCTCAGCATCGCGCGCCACG
CGGATCGGCTCACGCCGGCCGAGATCAACATGCTGACGCTGCAGACGAACTGGCTCGCGAATCTCTCGCATTCGCTGATG
AGTCGCTTCATGGTGCCGAAGCTGTCGCCCGAGGCGCGCGTCGCGCTGACCGCGCGCGAGCGCGAGGTGCTGTGCTGGAC
CGCCGAAGGCAAGACCGCGTGCGAGATCGGCCAGATCCTCTGCATCTCCGAGCGCACGGTCAACTTCCACGTCAACAACA
TCCTCGAGAAGCTCGGCGCGACGAACAAGGTGCAGGCCGTCGTGAAGGCGATTTCGGCGGGACTCATCGATACGCCCTGA

Upstream 100 bases:

>100_bases
ACCGCATGCAGCAAAGAAGAAGTCATGCGTTGGAATGTATCAGGCGCCGATCGGTGCTGGAACCTGACAAGTATGACAGC
GTGACGTTGTCGGAGAAAGA

Downstream 100 bases:

>100_bases
CGCGGCCGAGCGGCACGCTGCGCCGCTCGCGTCCGCAGGGCGACGTGCGCCGCACGTTCGCGCGCCGACACCGGTCACTC
CATCATCGGCTCCGCTTCCT

Product: LuxR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 239; Mature: 239

Protein sequence:

>239_residues
MELRWQDAYDEFSAAEDEQQLFQRIAAYSKRLGFEYCCYGIRVPLPVSKPAVAIFDTYPDGWMAHYQAQNYIEIDSTVRD
GALSTNMIVWPDVDKIEPCPLWRDARDFGLSVGVAQSSWAARGAFGLLSIARHADRLTPAEINMLTLQTNWLANLSHSLM
SRFMVPKLSPEARVALTAREREVLCWTAEGKTACEIGQILCISERTVNFHVNNILEKLGATNKVQAVVKAISAGLIDTP

Sequences:

>Translated_239_residues
MELRWQDAYDEFSAAEDEQQLFQRIAAYSKRLGFEYCCYGIRVPLPVSKPAVAIFDTYPDGWMAHYQAQNYIEIDSTVRD
GALSTNMIVWPDVDKIEPCPLWRDARDFGLSVGVAQSSWAARGAFGLLSIARHADRLTPAEINMLTLQTNWLANLSHSLM
SRFMVPKLSPEARVALTAREREVLCWTAEGKTACEIGQILCISERTVNFHVNNILEKLGATNKVQAVVKAISAGLIDTP
>Mature_239_residues
MELRWQDAYDEFSAAEDEQQLFQRIAAYSKRLGFEYCCYGIRVPLPVSKPAVAIFDTYPDGWMAHYQAQNYIEIDSTVRD
GALSTNMIVWPDVDKIEPCPLWRDARDFGLSVGVAQSSWAARGAFGLLSIARHADRLTPAEINMLTLQTNWLANLSHSLM
SRFMVPKLSPEARVALTAREREVLCWTAEGKTACEIGQILCISERTVNFHVNNILEKLGATNKVQAVVKAISAGLIDTP

Specific function: Activates Cell Division By Specifically Increasing Transcription From One Of The Two Promoters That Lie Immediately Upstream Of The Ftsqaz Gene Cluster. [C]

COG id: COG2771

COG function: function code K; DNA-binding HTH domain-containing proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH luxR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788224, Length=230, Percent_Identity=35.2173913043478, Blast_Score=147, Evalue=5e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016032
- InterPro:   IPR005143
- InterPro:   IPR000792
- InterPro:   IPR011991 [H]

Pfam domain/function: PF03472 Autoind_bind; PF00196 GerE [H]

EC number: NA

Molecular weight: Translated: 26741; Mature: 26741

Theoretical pI: Translated: 5.35; Mature: 5.35

Prosite motif: PS00622 HTH_LUXR_1 ; PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELRWQDAYDEFSAAEDEQQLFQRIAAYSKRLGFEYCCYGIRVPLPVSKPAVAIFDTYPD
CCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHEEEEECCCCCCCEEEEEECCCC
GWMAHYQAQNYIEIDSTVRDGALSTNMIVWPDVDKIEPCPLWRDARDFGLSVGVAQSSWA
CCEEHHCCCCEEEECCCCCCCCCCCCEEEECCCCCCCCCCCCCCHHHCCEEEECCCCCCH
ARGAFGLLSIARHADRLTPAEINMLTLQTNWLANLSHSLMSRFMVPKLSPEARVALTARE
HHHHHHHHHHHHHHCCCCCCCEEEEEEECHHHHHHHHHHHHHHCCCCCCCCCEEEEEECC
REVLCWTAEGKTACEIGQILCISERTVNFHVNNILEKLGATNKVQAVVKAISAGLIDTP
CEEEEEECCCCCHHHHCCEEEEECCEEEEEHHHHHHHHCCCHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MELRWQDAYDEFSAAEDEQQLFQRIAAYSKRLGFEYCCYGIRVPLPVSKPAVAIFDTYPD
CCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHEEEEECCCCCCCEEEEEECCCC
GWMAHYQAQNYIEIDSTVRDGALSTNMIVWPDVDKIEPCPLWRDARDFGLSVGVAQSSWA
CCEEHHCCCCEEEECCCCCCCCCCCCEEEECCCCCCCCCCCCCCHHHCCEEEECCCCCCH
ARGAFGLLSIARHADRLTPAEINMLTLQTNWLANLSHSLMSRFMVPKLSPEARVALTARE
HHHHHHHHHHHHHHCCCCCCCEEEEEEECHHHHHHHHHHHHHHCCCCCCCCCEEEEEECC
REVLCWTAEGKTACEIGQILCISERTVNFHVNNILEKLGATNKVQAVVKAISAGLIDTP
CEEEEEECCCCCHHHHCCEEEEECCEEEEEHHHHHHHHCCCHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11823852 [H]