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The map label for this gene is oprB [H]

Identifier: 189353260

GI number: 189353260

Start: 1495293

End: 1496744

Strand: Direct

Name: oprB [H]

Synonym: BMULJ_04500

Alternate gene names: 189353260

Gene position: 1495293-1496744 (Clockwise)

Preceding gene: 189353254

Following gene: 189353262

Centisome position: 60.46

GC content: 69.56

Gene sequence:

>1452_bases
ATGTCGTCCGTTTCGCTGCCCGGAACCTCGCCCGCCGCCGTGCCCGTTCGCGTTCCGCGTCGCCTGTGCATCGCGGCGCT
GGCCTGCGCGGCCCAGCTGCTCGCGGGCACCGCCGCCGCGCAGCAGGCACCGGCGGCCGCGCCGACCTCCGCCGAACCGC
CCGCCGAGGCAGACGGCCTCTGGACGCGCGACACGCTGCTCGGCGACATCGGCGGCCTTCGTCCATGGCTCGGCAAGTAC
GGCGTCACGCTCGCGGCGACCGAAACGAGCGAGCTGCTCGCGAACCTGCACGGCGGGCTCGAGCGCGGTGTCGGCTATCA
CGGCGTCACGACGGTCACGCTCGGGCTCGACACCGAGAAGGCGTTCGGCTGGAAAGGCGGCAGCTTCAACGCGAGCGCCT
TGCAGATCCACGGCCGACAGTTCAGCCAGAGCCATCTCGGCACGCTGAACACCGCGAGCGGCACCGAAGCCGACGCCGCC
ACGCGCCTGTGGGAACTCTGGTATCAGCAGTCGCTGCTCGACGATCGCGTCGACGTGAAGATCGGCCAGCAGGCCGTCGA
TCAGGAATTCCTGACGAGCACGTACTCGGCGACGTTCATGAACACGATGTTCGGCTGGCCCGCGCTGCCGTCATACGATT
TGCCGAGCGGCGGCCCTGCGTATCCGCTGTCGGCGCTCGGCGTGCGCGTGCGCGCGAAGCTGACGCCGTCGCTGACCGCA
CTGGCCGGCGTGTTCGACGGCGATCCGCTCGGCAACAATCCGGACAATCACAGCGGCACCAATTTCAACCTGCACAACGG
CGCGCTGTTCATCGGCGAACTGCAGTACGCGATCAATCAGGACGGTGCGGCCGGCGGCGCCGCGAAGTCGGGCGCGCTGC
CCGGCACCTACAAGCTCGGCCTCTGGTATCACAGCGGCAGCTTCGCCGATCAGCGCGACGACACGGCCGGCCGTTCGCTC
GCCAGCGCCGATTCGACCGGCATCGGCCGGCCGCGCCATGGCGACTACAGCGTCTATGCAGTCGCCGATCAGATGGTGTG
GCGCGCAGGCCCCGACAGTCCGCGCAGCCTTGGTGTGTTCGCCCGCGTGATGGCGGCGCCCGGCGACCGCAACGTCGTCA
GTGCCGCCGCAAACCTCGGCGTCGTGCTGAAAGCGCCGTTCGCCGGCCGCGACAACGATTCCGCCGGCCTCGCGCTCACG
TACGTGAAAGTCGGCCGCCATGCACGCGCGCTCGACGAGGATGCGCGCGCATTCGGCGGCGCGCCGTACGGCGTGCGCGG
CAGCGAAACCGCGCTCGAAGCGACCTACAACTACCAGGTCGCGCCGTGGTGGCAGATTCAGGCCGATGCGCAATACACGT
TCAATGCGGGCGCAGGCCAGAATCCGGACGATCCGCGCGCGCCGCTGCACAACACGTTCGTGCTCGGCGTGCGCACGACC
ATCACGTTCTGA

Upstream 100 bases:

>100_bases
TTGACGCGGCCACCGCCGTTTCTTACGATTCGCCCCGCTTCGCGTTGCTGTGCCCGCGCCGCCGCGCGGTTCGTCCACCG
TCCGTCCCGCAAGGAAAATC

Downstream 100 bases:

>100_bases
CGGCGGGCTGCGCGCACGCGCGGTGCGGCCTGCGTGCGGCCGGCCGCGAACCGCGTCGTCGCGTCACGCGGCCATCCACG
CCGGCAGCCGACGATCCACC

Product: porin

Products: NA

Alternate protein names: Glucose porin; Outer membrane protein D1 [H]

Number of amino acids: Translated: 483; Mature: 482

Protein sequence:

>483_residues
MSSVSLPGTSPAAVPVRVPRRLCIAALACAAQLLAGTAAAQQAPAAAPTSAEPPAEADGLWTRDTLLGDIGGLRPWLGKY
GVTLAATETSELLANLHGGLERGVGYHGVTTVTLGLDTEKAFGWKGGSFNASALQIHGRQFSQSHLGTLNTASGTEADAA
TRLWELWYQQSLLDDRVDVKIGQQAVDQEFLTSTYSATFMNTMFGWPALPSYDLPSGGPAYPLSALGVRVRAKLTPSLTA
LAGVFDGDPLGNNPDNHSGTNFNLHNGALFIGELQYAINQDGAAGGAAKSGALPGTYKLGLWYHSGSFADQRDDTAGRSL
ASADSTGIGRPRHGDYSVYAVADQMVWRAGPDSPRSLGVFARVMAAPGDRNVVSAAANLGVVLKAPFAGRDNDSAGLALT
YVKVGRHARALDEDARAFGGAPYGVRGSETALEATYNYQVAPWWQIQADAQYTFNAGAGQNPDDPRAPLHNTFVLGVRTT
ITF

Sequences:

>Translated_483_residues
MSSVSLPGTSPAAVPVRVPRRLCIAALACAAQLLAGTAAAQQAPAAAPTSAEPPAEADGLWTRDTLLGDIGGLRPWLGKY
GVTLAATETSELLANLHGGLERGVGYHGVTTVTLGLDTEKAFGWKGGSFNASALQIHGRQFSQSHLGTLNTASGTEADAA
TRLWELWYQQSLLDDRVDVKIGQQAVDQEFLTSTYSATFMNTMFGWPALPSYDLPSGGPAYPLSALGVRVRAKLTPSLTA
LAGVFDGDPLGNNPDNHSGTNFNLHNGALFIGELQYAINQDGAAGGAAKSGALPGTYKLGLWYHSGSFADQRDDTAGRSL
ASADSTGIGRPRHGDYSVYAVADQMVWRAGPDSPRSLGVFARVMAAPGDRNVVSAAANLGVVLKAPFAGRDNDSAGLALT
YVKVGRHARALDEDARAFGGAPYGVRGSETALEATYNYQVAPWWQIQADAQYTFNAGAGQNPDDPRAPLHNTFVLGVRTT
ITF
>Mature_482_residues
SSVSLPGTSPAAVPVRVPRRLCIAALACAAQLLAGTAAAQQAPAAAPTSAEPPAEADGLWTRDTLLGDIGGLRPWLGKYG
VTLAATETSELLANLHGGLERGVGYHGVTTVTLGLDTEKAFGWKGGSFNASALQIHGRQFSQSHLGTLNTASGTEADAAT
RLWELWYQQSLLDDRVDVKIGQQAVDQEFLTSTYSATFMNTMFGWPALPSYDLPSGGPAYPLSALGVRVRAKLTPSLTAL
AGVFDGDPLGNNPDNHSGTNFNLHNGALFIGELQYAINQDGAAGGAAKSGALPGTYKLGLWYHSGSFADQRDDTAGRSLA
SADSTGIGRPRHGDYSVYAVADQMVWRAGPDSPRSLGVFARVMAAPGDRNVVSAAANLGVVLKAPFAGRDNDSAGLALTY
VKVGRHARALDEDARAFGGAPYGVRGSETALEATYNYQVAPWWQIQADAQYTFNAGAGQNPDDPRAPLHNTFVLGVRTTI
TF

Specific function: Substrate-selective channel for a variety of different sugars. Could potentially facilitate the diffusion of diverse compounds, dependent on the presence of a hydroxyl group, but is presumably restricted to carbohydrates. Involved in the transport of gluc

COG id: COG3659

COG function: function code M; Carbohydrate-selective porin

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the oprB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007049 [H]

Pfam domain/function: PF04966 OprB [H]

EC number: NA

Molecular weight: Translated: 50605; Mature: 50474

Theoretical pI: Translated: 6.18; Mature: 6.18

Prosite motif: PS00678 WD_REPEATS_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSVSLPGTSPAAVPVRVPRRLCIAALACAAQLLAGTAAAQQAPAAAPTSAEPPAEADGL
CCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
WTRDTLLGDIGGLRPWLGKYGVTLAATETSELLANLHGGLERGVGYHGVTTVTLGLDTEK
EEHHHHHHHHCCCCHHHHHCCEEEEECCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCHH
AFGWKGGSFNASALQIHGRQFSQSHLGTLNTASGTEADAATRLWELWYQQSLLDDRVDVK
HCCCCCCCCCCEEEEEECCHHCHHHCCCEECCCCCCHHHHHHHHHHHHHHHHHCCCCCEE
IGQQAVDQEFLTSTYSATFMNTMFGWPALPSYDLPSGGPAYPLSALGVRVRAKLTPSLTA
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHCEEEEEECCCCHHH
LAGVFDGDPLGNNPDNHSGTNFNLHNGALFIGELQYAINQDGAAGGAAKSGALPGTYKLG
HHHCCCCCCCCCCCCCCCCCEEEECCCEEEEEEEEEECCCCCCCCCCCCCCCCCCEEEEE
LWYHSGSFADQRDDTAGRSLASADSTGIGRPRHGDYSVYAVADQMVWRAGPDSPRSLGVF
EEEECCCCCCCCCCHHCCHHHCCCCCCCCCCCCCCEEEEEEEEHHHHCCCCCCCHHHHHH
ARVMAAPGDRNVVSAAANLGVVLKAPFAGRDNDSAGLALTYVKVGRHARALDEDARAFGG
HHHHHCCCCCHHHHHHCCCCEEEECCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHCC
APYGVRGSETALEATYNYQVAPWWQIQADAQYTFNAGAGQNPDDPRAPLHNTFVLGVRTT
CCCCCCCCCCEEEEEECEEECCEEEEEECCEEEEECCCCCCCCCCCCCCCCEEEEEEEEE
ITF
ECC
>Mature Secondary Structure 
SSVSLPGTSPAAVPVRVPRRLCIAALACAAQLLAGTAAAQQAPAAAPTSAEPPAEADGL
CCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
WTRDTLLGDIGGLRPWLGKYGVTLAATETSELLANLHGGLERGVGYHGVTTVTLGLDTEK
EEHHHHHHHHCCCCHHHHHCCEEEEECCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCHH
AFGWKGGSFNASALQIHGRQFSQSHLGTLNTASGTEADAATRLWELWYQQSLLDDRVDVK
HCCCCCCCCCCEEEEEECCHHCHHHCCCEECCCCCCHHHHHHHHHHHHHHHHHCCCCCEE
IGQQAVDQEFLTSTYSATFMNTMFGWPALPSYDLPSGGPAYPLSALGVRVRAKLTPSLTA
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHCEEEEEECCCCHHH
LAGVFDGDPLGNNPDNHSGTNFNLHNGALFIGELQYAINQDGAAGGAAKSGALPGTYKLG
HHHCCCCCCCCCCCCCCCCCEEEECCCEEEEEEEEEECCCCCCCCCCCCCCCCCCEEEEE
LWYHSGSFADQRDDTAGRSLASADSTGIGRPRHGDYSVYAVADQMVWRAGPDSPRSLGVF
EEEECCCCCCCCCCHHCCHHHCCCCCCCCCCCCCCEEEEEEEEHHHHCCCCCCCHHHHHH
ARVMAAPGDRNVVSAAANLGVVLKAPFAGRDNDSAGLALTYVKVGRHARALDEDARAFGG
HHHHHCCCCCHHHHHHCCCCEEEECCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHCC
APYGVRGSETALEATYNYQVAPWWQIQADAQYTFNAGAGQNPDDPRAPLHNTFVLGVRTT
CCCCCCCCCCEEEEEECEEECCEEEEEECCEEEEECCCCCCCCCCCCCCCCEEEEEEEEE
ITF
ECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8125108; 10984043; 2450582; 8132494; 7768797 [H]