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The map label for this gene is tse [H]

Identifier: 189353239

GI number: 189353239

Start: 1472384

End: 1473943

Strand: Reverse

Name: tse [H]

Synonym: BMULJ_04479

Alternate gene names: 189353239

Gene position: 1473943-1472384 (Counterclockwise)

Preceding gene: 189353249

Following gene: 189353236

Centisome position: 59.6

GC content: 70.83

Gene sequence:

>1560_bases
ATGAATCTGAACGCCCTGTTTTCCCGTTTCTCGATCCGCACCCGCATCTTTTCCACGCTCGGCCTTGTCGCGGGGCTGCT
CGTCGTGTCGGGGCTGATCGGCCTCGCCGGCATGCAAAGCTCGAACCGTGCGCTCGACGAGGCGTACACGCGCCAGCTCG
CCGCAAAGACCGCGCTGGCGGCCGCCACGCTGAACCTGACGATCGTGCGCACCACGCTCGATCGCGCCGTGCTGCATCCG
GAGGCGCCCGACGTGCCCGAGCTCGTCGCGAAGGCCGAGAACTACCTCGCGAAGGCGAATGCCGCGTGGGGCACGTACGC
GGCGATGCCGCACGATGCCGACGAAGCGCCGCTCGCGAGCCGGCTCGACGCCGCGCGCCAGGCGCTGATCGGACAGGCGC
TGAAGCCGCTCGCCGATGCGATCCGCGAAGGCCGGCGCGACGACGCAGACCGGCTGCTGATGTCCGTCGCGCCGCCGCTG
TCGGTCGCGCTGACGCGCGCGACCGATGCGCTCGACACGTTCCAGGCCGCACGCGGCCGCGCCGTCTACGACGCCGCGCA
AACGCGCTACGACTGGCTGCGCGCCGGCGCGATCGCCGGCATCGCGCTCGGCGTTGCCGCGTGTCTCGGCTGCGCGATCG
GCCTGCACTTCGCGATCACGCAGCCGGTCAACCGTCTGCTCACGCATTTCCGCCGGCTGTCCGACGGCGACCTGACGTCG
GAAGTGCGCTGGACGTCGCGCGACGAGATGGCGGAACTCGTGAAGGGTGTGACCGGCATGCAGCGCAGCCTCGCCGATAC
GGTGCGCCAGGTTGCGCACGGCTCCGACGCGATCTCGACCGCGACGCACCAGATCGCGGCCGGCAATACAGACCTGTCGC
AACGCACCGAGGAACAGGCGGCCGCGCTGCAGCAGACGGCCGCGAGCATGGAGCAGCTGACCGCGACCGTGAAGCAGAAC
GCCGATCACGCGCTCGAGGCGCAGGCCTGCGCCGACGACGCGCGCGAGATCGCGACGCGCGGCGCGACGGTCGTCGGCGA
AGTGATCGGCACGATGGGCGAGATCGACCAGAGTTCGCAGAAGGTCGCCGACATCATCGGCACGATCGAGGGCATCGCGT
TTCAGACCAACATCCTCGCGCTGAATGCGGCAGTCGAAGCCGCGCGCGCGGGCGAGCAGGGCCGCGGCTTCGCGGTGGTT
GCCGGCGAGGTGCGCACGCTCGCGCAGCGCTCGGCGTCCGCGGCGAAGGAAATCCGCACGCTGATCGGCGAGTCGGTCGA
GCGTGTCGCGAACGGATCGCGGCTCGTCGGCGTCGCGGGCGAAACGATGCGTGACATTCAGCAGGCGATCGCGCGCGTCG
CCGGCATCATGACCGAGATCGCGGCCGCGTCGAACGAGCAGCGCGACGGCATCGAGCGGGTCAATCGCGCCGTGTCGCAG
ATGGATCAGGTATCGCAGCAGAACGCCGCGCTCGTCGAGCAGGCGGCGGCCGCCGCCGCGTCGCTCGAGGAGCAGGCCGA
AGGCTTGCGGCGCGCGGTCGGCGCGTTCCGCGTCGCCTGA

Upstream 100 bases:

>100_bases
TCAGCCCGAAACGGGGCCGGACTCAAGTTTTCTGAAGGCGAACCGTAATCCTGAGTGCCGCGTCCGCCGGTCGCGGCGCT
TTTCTCGATCCCGTGCCGTC

Downstream 100 bases:

>100_bases
GCCCGAGCGCGCGGCCGCGTCAGGCGGCCGTCAATTGCGCGGCGGCGCGCGCCGACGCGACGATCAGCAGCTTCATCGTC
GCGCGCGTCGCGCCGACGAA

Product: putative methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 519; Mature: 519

Protein sequence:

>519_residues
MNLNALFSRFSIRTRIFSTLGLVAGLLVVSGLIGLAGMQSSNRALDEAYTRQLAAKTALAAATLNLTIVRTTLDRAVLHP
EAPDVPELVAKAENYLAKANAAWGTYAAMPHDADEAPLASRLDAARQALIGQALKPLADAIREGRRDDADRLLMSVAPPL
SVALTRATDALDTFQAARGRAVYDAAQTRYDWLRAGAIAGIALGVAACLGCAIGLHFAITQPVNRLLTHFRRLSDGDLTS
EVRWTSRDEMAELVKGVTGMQRSLADTVRQVAHGSDAISTATHQIAAGNTDLSQRTEEQAAALQQTAASMEQLTATVKQN
ADHALEAQACADDAREIATRGATVVGEVIGTMGEIDQSSQKVADIIGTIEGIAFQTNILALNAAVEAARAGEQGRGFAVV
AGEVRTLAQRSASAAKEIRTLIGESVERVANGSRLVGVAGETMRDIQQAIARVAGIMTEIAAASNEQRDGIERVNRAVSQ
MDQVSQQNAALVEQAAAAAASLEEQAEGLRRAVGAFRVA

Sequences:

>Translated_519_residues
MNLNALFSRFSIRTRIFSTLGLVAGLLVVSGLIGLAGMQSSNRALDEAYTRQLAAKTALAAATLNLTIVRTTLDRAVLHP
EAPDVPELVAKAENYLAKANAAWGTYAAMPHDADEAPLASRLDAARQALIGQALKPLADAIREGRRDDADRLLMSVAPPL
SVALTRATDALDTFQAARGRAVYDAAQTRYDWLRAGAIAGIALGVAACLGCAIGLHFAITQPVNRLLTHFRRLSDGDLTS
EVRWTSRDEMAELVKGVTGMQRSLADTVRQVAHGSDAISTATHQIAAGNTDLSQRTEEQAAALQQTAASMEQLTATVKQN
ADHALEAQACADDAREIATRGATVVGEVIGTMGEIDQSSQKVADIIGTIEGIAFQTNILALNAAVEAARAGEQGRGFAVV
AGEVRTLAQRSASAAKEIRTLIGESVERVANGSRLVGVAGETMRDIQQAIARVAGIMTEIAAASNEQRDGIERVNRAVSQ
MDQVSQQNAALVEQAAAAAASLEEQAEGLRRAVGAFRVA
>Mature_519_residues
MNLNALFSRFSIRTRIFSTLGLVAGLLVVSGLIGLAGMQSSNRALDEAYTRQLAAKTALAAATLNLTIVRTTLDRAVLHP
EAPDVPELVAKAENYLAKANAAWGTYAAMPHDADEAPLASRLDAARQALIGQALKPLADAIREGRRDDADRLLMSVAPPL
SVALTRATDALDTFQAARGRAVYDAAQTRYDWLRAGAIAGIALGVAACLGCAIGLHFAITQPVNRLLTHFRRLSDGDLTS
EVRWTSRDEMAELVKGVTGMQRSLADTVRQVAHGSDAISTATHQIAAGNTDLSQRTEEQAAALQQTAASMEQLTATVKQN
ADHALEAQACADDAREIATRGATVVGEVIGTMGEIDQSSQKVADIIGTIEGIAFQTNILALNAAVEAARAGEQGRGFAVV
AGEVRTLAQRSASAAKEIRTLIGESVERVANGSRLVGVAGETMRDIQQAIARVAGIMTEIAAASNEQRDGIERVNRAVSQ
MDQVSQQNAALVEQAAAAAASLEEQAEGLRRAVGAFRVA

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1788195, Length=306, Percent_Identity=60.4575163398693, Blast_Score=313, Evalue=1e-86,
Organism=Escherichia coli, GI2367378, Length=534, Percent_Identity=41.7602996254682, Blast_Score=301, Evalue=7e-83,
Organism=Escherichia coli, GI1787690, Length=432, Percent_Identity=45.1388888888889, Blast_Score=296, Evalue=3e-81,
Organism=Escherichia coli, GI1788194, Length=335, Percent_Identity=51.6417910447761, Blast_Score=287, Evalue=1e-78,
Organism=Escherichia coli, GI1789453, Length=322, Percent_Identity=36.3354037267081, Blast_Score=190, Evalue=2e-49,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR003122
- InterPro:   IPR004091
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 54615; Mature: 54615

Theoretical pI: Translated: 5.54; Mature: 5.54

Prosite motif: PS50885 HAMP ; PS00538 CHEMOTAXIS_TRANSDUC_1 ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLNALFSRFSIRTRIFSTLGLVAGLLVVSGLIGLAGMQSSNRALDEAYTRQLAAKTALA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
AATLNLTIVRTTLDRAVLHPEAPDVPELVAKAENYLAKANAAWGTYAAMPHDADEAPLAS
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHH
RLDAARQALIGQALKPLADAIREGRRDDADRLLMSVAPPLSVALTRATDALDTFQAARGR
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCC
AVYDAAQTRYDWLRAGAIAGIALGVAACLGCAIGLHFAITQPVNRLLTHFRRLSDGDLTS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH
EVRWTSRDEMAELVKGVTGMQRSLADTVRQVAHGSDAISTATHQIAAGNTDLSQRTEEQA
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHH
AALQQTAASMEQLTATVKQNADHALEAQACADDAREIATRGATVVGEVIGTMGEIDQSSQ
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHH
KVADIIGTIEGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRTLAQRSASAAKEIRT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHH
LIGESVERVANGSRLVGVAGETMRDIQQAIARVAGIMTEIAAASNEQRDGIERVNRAVSQ
HHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
MDQVSQQNAALVEQAAAAAASLEEQAEGLRRAVGAFRVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNLNALFSRFSIRTRIFSTLGLVAGLLVVSGLIGLAGMQSSNRALDEAYTRQLAAKTALA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
AATLNLTIVRTTLDRAVLHPEAPDVPELVAKAENYLAKANAAWGTYAAMPHDADEAPLAS
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHH
RLDAARQALIGQALKPLADAIREGRRDDADRLLMSVAPPLSVALTRATDALDTFQAARGR
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCC
AVYDAAQTRYDWLRAGAIAGIALGVAACLGCAIGLHFAITQPVNRLLTHFRRLSDGDLTS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH
EVRWTSRDEMAELVKGVTGMQRSLADTVRQVAHGSDAISTATHQIAAGNTDLSQRTEEQA
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHH
AALQQTAASMEQLTATVKQNADHALEAQACADDAREIATRGATVVGEVIGTMGEIDQSSQ
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHH
KVADIIGTIEGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRTLAQRSASAAKEIRT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHH
LIGESVERVANGSRLVGVAGETMRDIQQAIARVAGIMTEIAAASNEQRDGIERVNRAVSQ
HHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
MDQVSQQNAALVEQAAAAAASLEEQAEGLRRAVGAFRVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2496104 [H]