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The map label for this gene is 189353238

Identifier: 189353238

GI number: 189353238

Start: 1470697

End: 1472364

Strand: Direct

Name: 189353238

Synonym: BMULJ_04478

Alternate gene names: NA

Gene position: 1470697-1472364 (Clockwise)

Preceding gene: 189353237

Following gene: 189353240

Centisome position: 59.47

GC content: 70.26

Gene sequence:

>1668_bases
ATGGCCCGCCTCATCCCCGACGACTGGAAAAATCTCGCCGCGACCGGCGCTGCCGAACGCGAACGCGAAACGCTCGCCGC
ACTCGAACACGCGCTGCCGGACGGCTACACCGTCTACCACGGCGTGCACTGGACGCGCGCCGACCAGGGCTTTTCGGTGT
TCGGCGAGACCGCGTTCGTCGTCGTGAGCCCGGCCGGCCGCGTGCTGCTGATCGAGCTGAAGGCCGGTTTCCTGCGCGAG
ACGCCGAAAGGGCTCGTGAAGGTGTATCTGCAGACCGAGCGCAACGTCGCGATCCAGCTCGCGCGCACGCAGGAAACGCT
GCACCGGCGGCTGACGGCCGCGTTCGGCGCGGGCGTCTACGGGATCGACGCGCTGCTGTATTGCCCCGACTACGCGATTC
GCCAGACCGCGATCGCGGGCGTCGCGGCCGACCGCATCGTCGACGCGTCGCGCAAGGCGCAGCTCGCGCAGGTGATTGTG
CAGATCCTGCCCGAAGACGAAACGCCGCTGCCGAACGCCGCCAAGATCCACCACTTTCTCGCCGACGAGCTCGCGCTGAC
GCCCGACACGAGCGCGCTCGTCGGCCAGGCCGGCACGCTCGTCACGCGGCTGTCGGGCGGCCTCGCCGCCTGGGCGCGCC
AGCTCGAGTTCACGCCGTTCCGGCTGCGCGTGACGGGCACCGCCGGCTCCGGCAAGACGCAGCTCGCCGTGCAGGCGATG
CGCGATGCGGTCGCGGCCGGCAAGCGCGTGCTGTACGTCTGCTTCAACCGGCCGCTCGCCGACTACATCGCACGTATCGC
GCCGGCGGGCGCGACGGTCGCGAACTACCACCAGCTGTGCGACTGGGTCGCGCGCGACGGCGGCTATGTGCCGGATTTCG
AGGCGCCCGGCGCGTTCGAACAGCTCGAAGCGCGCTTTGCGCAGACGCCGATCGCCGAACGCTGGCGCTTCGACGTGCTG
ATCGTCGACGAGGGACAGGATTTTCACGCGTCGTGGGCCGCCGCGCTCGAACGGCTGCTCGCGGCCGACGGCGCATGGTG
GTGGCTGGAGGATCCGCTGCAGAACCTCTACATGCGCGAACCGGTCGCGCTGCCGGGCTGGGTCACGCTGAAGGCGCTGA
CGAACTACCGCAGCCCGCGCGACGTGCTCGAATTCGTGCGCGACATCGTCGGGCGCGTCGAACCGCTCGCGACGGAACTG
CGCTCGGGTAGCCCGTTCGACGGGTCCGATCCGTCGGTGTCGGCGTACGGCGAACCCGATGCGTCGGCCGACACGCTCGC
CGACGCCTGCATCGACGCGACCAAGCGCGCGATCACGCACGCGCTGTCGCTCGGCTTTCGCAAGCAGGACATCGCGGTGT
TGTCGTACCGCGGCCGCGAAGGGTCGGTGCTCGCGCCGCTCGACCAGCTCGGCCCGCACCGGCTCAAGCGCTTCACCGGC
ACGTACGACCTGTTCGGCAACCCCGAGTATCGCGACGGCGACGTGCTGCTCGATTCGATCCATCGCTTCAAGGGACAGTC
GGCGCCGTGCGTGATCCTCACCGAGGTCGACTTCGCGTCGCTCGACGCGCGCGCGGCCCGCAAGCTGTTCGTCGGCGCGA
CGCGCGCGACGATGAAGCTGCTGATCGTCGCGTCGGCGCGCGCCGCCGCGCAATTGACGGCCGCCTGA

Upstream 100 bases:

>100_bases
TCGCACGCGGATAACACGGCGCGCACGGCGGCCGTCCGCGGCTTCGTCAGTACAATAGCCGGACCCGTTCACGCGACGCC
GGCATCCGCCGCCCGACTCC

Downstream 100 bases:

>100_bases
CGCGGCCGCGCGCTCGGGCTCAGGCGACGCGGAACGCGCCGACCGCGCGCCGCAAGCCTTCGGCCTGCTCCTCGAGCGAC
GCGGCGGCGGCCGCCGCCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NERD Domain-Containing Protein; Nerd Domain Protein; AAA ATPase

Number of amino acids: Translated: 555; Mature: 554

Protein sequence:

>555_residues
MARLIPDDWKNLAATGAAERERETLAALEHALPDGYTVYHGVHWTRADQGFSVFGETAFVVVSPAGRVLLIELKAGFLRE
TPKGLVKVYLQTERNVAIQLARTQETLHRRLTAAFGAGVYGIDALLYCPDYAIRQTAIAGVAADRIVDASRKAQLAQVIV
QILPEDETPLPNAAKIHHFLADELALTPDTSALVGQAGTLVTRLSGGLAAWARQLEFTPFRLRVTGTAGSGKTQLAVQAM
RDAVAAGKRVLYVCFNRPLADYIARIAPAGATVANYHQLCDWVARDGGYVPDFEAPGAFEQLEARFAQTPIAERWRFDVL
IVDEGQDFHASWAAALERLLAADGAWWWLEDPLQNLYMREPVALPGWVTLKALTNYRSPRDVLEFVRDIVGRVEPLATEL
RSGSPFDGSDPSVSAYGEPDASADTLADACIDATKRAITHALSLGFRKQDIAVLSYRGREGSVLAPLDQLGPHRLKRFTG
TYDLFGNPEYRDGDVLLDSIHRFKGQSAPCVILTEVDFASLDARAARKLFVGATRATMKLLIVASARAAAQLTAA

Sequences:

>Translated_555_residues
MARLIPDDWKNLAATGAAERERETLAALEHALPDGYTVYHGVHWTRADQGFSVFGETAFVVVSPAGRVLLIELKAGFLRE
TPKGLVKVYLQTERNVAIQLARTQETLHRRLTAAFGAGVYGIDALLYCPDYAIRQTAIAGVAADRIVDASRKAQLAQVIV
QILPEDETPLPNAAKIHHFLADELALTPDTSALVGQAGTLVTRLSGGLAAWARQLEFTPFRLRVTGTAGSGKTQLAVQAM
RDAVAAGKRVLYVCFNRPLADYIARIAPAGATVANYHQLCDWVARDGGYVPDFEAPGAFEQLEARFAQTPIAERWRFDVL
IVDEGQDFHASWAAALERLLAADGAWWWLEDPLQNLYMREPVALPGWVTLKALTNYRSPRDVLEFVRDIVGRVEPLATEL
RSGSPFDGSDPSVSAYGEPDASADTLADACIDATKRAITHALSLGFRKQDIAVLSYRGREGSVLAPLDQLGPHRLKRFTG
TYDLFGNPEYRDGDVLLDSIHRFKGQSAPCVILTEVDFASLDARAARKLFVGATRATMKLLIVASARAAAQLTAA
>Mature_554_residues
ARLIPDDWKNLAATGAAERERETLAALEHALPDGYTVYHGVHWTRADQGFSVFGETAFVVVSPAGRVLLIELKAGFLRET
PKGLVKVYLQTERNVAIQLARTQETLHRRLTAAFGAGVYGIDALLYCPDYAIRQTAIAGVAADRIVDASRKAQLAQVIVQ
ILPEDETPLPNAAKIHHFLADELALTPDTSALVGQAGTLVTRLSGGLAAWARQLEFTPFRLRVTGTAGSGKTQLAVQAMR
DAVAAGKRVLYVCFNRPLADYIARIAPAGATVANYHQLCDWVARDGGYVPDFEAPGAFEQLEARFAQTPIAERWRFDVLI
VDEGQDFHASWAAALERLLAADGAWWWLEDPLQNLYMREPVALPGWVTLKALTNYRSPRDVLEFVRDIVGRVEPLATELR
SGSPFDGSDPSVSAYGEPDASADTLADACIDATKRAITHALSLGFRKQDIAVLSYRGREGSVLAPLDQLGPHRLKRFTGT
YDLFGNPEYRDGDVLLDSIHRFKGQSAPCVILTEVDFASLDARAARKLFVGATRATMKLLIVASARAAAQLTAA

Specific function: Unknown

COG id: COG0210

COG function: function code L; Superfamily I DNA and RNA helicases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 60474; Mature: 60343

Theoretical pI: Translated: 6.45; Mature: 6.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARLIPDDWKNLAATGAAERERETLAALEHALPDGYTVYHGVHWTRADQGFSVFGETAFV
CCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEEECEEEEECCCCCEEECCEEEE
VVSPAGRVLLIELKAGFLRETPKGLVKVYLQTERNVAIQLARTQETLHRRLTAAFGAGVY
EECCCCCEEEEEECCCHHHCCCHHHEEEEEECCCCEEEEEHHHHHHHHHHHHHHHCCCHH
GIDALLYCPDYAIRQTAIAGVAADRIVDASRKAQLAQVIVQILPEDETPLPNAAKIHHFL
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
ADELALTPDTSALVGQAGTLVTRLSGGLAAWARQLEFTPFRLRVTGTAGSGKTQLAVQAM
HHHHCCCCCCHHHHCCHHHHHHHHCCCHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHH
RDAVAAGKRVLYVCFNRPLADYIARIAPAGATVANYHQLCDWVARDGGYVPDFEAPGAFE
HHHHHCCCEEEEEEECCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHH
QLEARFAQTPIAERWRFDVLIVDEGQDFHASWAAALERLLAADGAWWWLEDPLQNLYMRE
HHHHHHHCCCCHHHCEEEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHCC
PVALPGWVTLKALTNYRSPRDVLEFVRDIVGRVEPLATELRSGSPFDGSDPSVSAYGEPD
CCCCCCCEEHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCC
ASADTLADACIDATKRAITHALSLGFRKQDIAVLSYRGREGSVLAPLDQLGPHRLKRFTG
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCEECCHHHCCHHHHHHHCC
TYDLFGNPEYRDGDVLLDSIHRFKGQSAPCVILTEVDFASLDARAARKLFVGATRATMKL
CEECCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCHHHCCHHHHHHHHHCCHHHHEEE
LIVASARAAAQLTAA
EEEECCHHHHHCCCC
>Mature Secondary Structure 
ARLIPDDWKNLAATGAAERERETLAALEHALPDGYTVYHGVHWTRADQGFSVFGETAFV
CCCCCCHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEEECEEEEECCCCCEEECCEEEE
VVSPAGRVLLIELKAGFLRETPKGLVKVYLQTERNVAIQLARTQETLHRRLTAAFGAGVY
EECCCCCEEEEEECCCHHHCCCHHHEEEEEECCCCEEEEEHHHHHHHHHHHHHHHCCCHH
GIDALLYCPDYAIRQTAIAGVAADRIVDASRKAQLAQVIVQILPEDETPLPNAAKIHHFL
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
ADELALTPDTSALVGQAGTLVTRLSGGLAAWARQLEFTPFRLRVTGTAGSGKTQLAVQAM
HHHHCCCCCCHHHHCCHHHHHHHHCCCHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHH
RDAVAAGKRVLYVCFNRPLADYIARIAPAGATVANYHQLCDWVARDGGYVPDFEAPGAFE
HHHHHCCCEEEEEEECCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHH
QLEARFAQTPIAERWRFDVLIVDEGQDFHASWAAALERLLAADGAWWWLEDPLQNLYMRE
HHHHHHHCCCCHHHCEEEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHCC
PVALPGWVTLKALTNYRSPRDVLEFVRDIVGRVEPLATELRSGSPFDGSDPSVSAYGEPD
CCCCCCCEEHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCC
ASADTLADACIDATKRAITHALSLGFRKQDIAVLSYRGREGSVLAPLDQLGPHRLKRFTG
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCEECCHHHCCHHHHHHHCC
TYDLFGNPEYRDGDVLLDSIHRFKGQSAPCVILTEVDFASLDARAARKLFVGATRATMKL
CEECCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCHHHCCHHHHHHHHHCCHHHHEEE
LIVASARAAAQLTAA
EEEECCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA