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The map label for this gene is xynZ [H]

Identifier: 189353229

GI number: 189353229

Start: 1458685

End: 1459608

Strand: Direct

Name: xynZ [H]

Synonym: BMULJ_04467

Alternate gene names: 189353229

Gene position: 1458685-1459608 (Clockwise)

Preceding gene: 189353228

Following gene: 189353230

Centisome position: 58.98

GC content: 69.05

Gene sequence:

>924_bases
ATGCGTCGACTCGCCTTCCCGCTCGCCCTTGCCCTGATCGCCGGCTCCATCGCCGCCGCGCGCGCCACGCCCGTCGCGTC
CGCCGCGCCATCGGGCGCGGCTGCGTCGTCGATCGCCACGCCGGCCGCGTCGGGCGCGACCCTCAACCCCGGCAGCAGCA
TCGTGCTGCGCACGTTCCGTTCGGCGTCGCTGCAGCGCGACTGGTCGTACACGGTCTACCTGCCGCCCGGCTACAACGCG
GAAGGCGCGCGCTATCCGGTGATGTATCTGCTGCACGGCAACGCGGGCAACGCGAACGACTGGATCACGCAAGGCCGGCT
GCAGGCGACGGCCGACACGCTGATCGAACGCCACGAGATTCCGCCGGTCGTGATCGTGATGCCGCAAGGCGGCACTGACT
GGTACGTCGATCGCAAGGAGAAGATGCAGAGCGCGTTTCTGAACGACCTGCTGCCCGAAGTCGAGATGCACTTCGCGGTA
TCGAACCAGCGCGCGGGCCGCGCGATCGGCGGCGTGTCGATGGGCGGCTTCGGCGCGCTACGCTTCGCGCTGCTCGAGCC
GGGGCTGTTCTGCGGCGCGATGCTGCTCAGCCCCGCCATCTACGCGAACGAGCCGCCGCTCAATTCGGCGGCGCGTTACG
TCGGCGTGTTCGGCGATCGCCAGTTCGACGCGCGCGTGTGGCACGAGCTGAACTATCCCGCGCTGATGCGCGGCTATTTC
GCGCGCACGTGGCGCGTGCCGATGTTCATCGCGGCCGGCGACGACGATCTGACGATCCAGGCCGAATCGAGCCTGCTCTA
TACGCATCTGCGGCGCGCGCAGAATCCGGCCGAGCTGCGCATCGTCGACGGCGGCCATACGTGGGACGTGTGGCGCGGGC
TGCTCGCGCCGGGGCTCAAATACACGCTCGACTGCGTGAAGTAA

Upstream 100 bases:

>100_bases
CGCGCGGCTGCCGTTCGGTTCGCGGCGCTGACATGCGGCTGACATGCGGCGCCATCGTCTGCTGCTACGATAGGCGTCGC
CTTTTCTGACCCGATTCGCC

Downstream 100 bases:

>100_bases
CGCGATGCGGCGCGTGCGCGATACGGGCGCATGCGCCGCGCTGCGCGTCGCCGCGCGATGTCAGTTCCACGCGTGCCGCG
CCGGCCGCACGCCGTTCAGA

Product: putative esterase

Products: NA

Alternate protein names: Xylanase Z; 1,4-beta-D-xylan xylanohydrolase Z [H]

Number of amino acids: Translated: 307; Mature: 307

Protein sequence:

>307_residues
MRRLAFPLALALIAGSIAAARATPVASAAPSGAAASSIATPAASGATLNPGSSIVLRTFRSASLQRDWSYTVYLPPGYNA
EGARYPVMYLLHGNAGNANDWITQGRLQATADTLIERHEIPPVVIVMPQGGTDWYVDRKEKMQSAFLNDLLPEVEMHFAV
SNQRAGRAIGGVSMGGFGALRFALLEPGLFCGAMLLSPAIYANEPPLNSAARYVGVFGDRQFDARVWHELNYPALMRGYF
ARTWRVPMFIAAGDDDLTIQAESSLLYTHLRRAQNPAELRIVDGGHTWDVWRGLLAPGLKYTLDCVK

Sequences:

>Translated_307_residues
MRRLAFPLALALIAGSIAAARATPVASAAPSGAAASSIATPAASGATLNPGSSIVLRTFRSASLQRDWSYTVYLPPGYNA
EGARYPVMYLLHGNAGNANDWITQGRLQATADTLIERHEIPPVVIVMPQGGTDWYVDRKEKMQSAFLNDLLPEVEMHFAV
SNQRAGRAIGGVSMGGFGALRFALLEPGLFCGAMLLSPAIYANEPPLNSAARYVGVFGDRQFDARVWHELNYPALMRGYF
ARTWRVPMFIAAGDDDLTIQAESSLLYTHLRRAQNPAELRIVDGGHTWDVWRGLLAPGLKYTLDCVK
>Mature_307_residues
MRRLAFPLALALIAGSIAAARATPVASAAPSGAAASSIATPAASGATLNPGSSIVLRTFRSASLQRDWSYTVYLPPGYNA
EGARYPVMYLLHGNAGNANDWITQGRLQATADTLIERHEIPPVVIVMPQGGTDWYVDRKEKMQSAFLNDLLPEVEMHFAV
SNQRAGRAIGGVSMGGFGALRFALLEPGLFCGAMLLSPAIYANEPPLNSAARYVGVFGDRQFDARVWHELNYPALMRGYF
ARTWRVPMFIAAGDDDLTIQAESSLLYTHLRRAQNPAELRIVDGGHTWDVWRGLLAPGLKYTLDCVK

Specific function: Unknown

COG id: COG0627

COG function: function code R; Predicted esterase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 CBM6 (carbohydrate binding type-6) domain [H]

Homologues:

Organism=Escherichia coli, GI145693201, Length=290, Percent_Identity=25.5172413793103, Blast_Score=79, Evalue=4e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005084
- InterPro:   IPR016134
- InterPro:   IPR002105
- InterPro:   IPR006584
- InterPro:   IPR018242
- InterPro:   IPR018247
- InterPro:   IPR000801
- InterPro:   IPR008979
- InterPro:   IPR001000
- InterPro:   IPR017853
- InterPro:   IPR013781 [H]

Pfam domain/function: PF03422 CBM_6; PF00404 Dockerin_1; PF00756 Esterase; PF00331 Glyco_hydro_10 [H]

EC number: =3.2.1.8 [H]

Molecular weight: Translated: 33307; Mature: 33307

Theoretical pI: Translated: 8.61; Mature: 8.61

Prosite motif: PS00041 HTH_ARAC_FAMILY_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRLAFPLALALIAGSIAAARATPVASAAPSGAAASSIATPAASGATLNPGSSIVLRTFR
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCCEECCCCHHHHHHHH
SASLQRDWSYTVYLPPGYNAEGARYPVMYLLHGNAGNANDWITQGRLQATADTLIERHEI
HHCCCCCCEEEEEECCCCCCCCCCCCEEEEEECCCCCCCHHHHCCCHHHHHHHHHHHHCC
PPVVIVMPQGGTDWYVDRKEKMQSAFLNDLLPEVEMHFAVSNQRAGRAIGGVSMGGFGAL
CCEEEEEECCCCCCEECHHHHHHHHHHHHHHHHHHEEEEECCCCCCCEECCCCCCCHHHH
RFALLEPGLFCGAMLLSPAIYANEPPLNSAARYVGVFGDRQFDARVWHELNYPALMRGYF
HHHHHCCCHHHHHHHHCCHHCCCCCCCCHHHHEEEECCCCCCCHHHHHCCCCHHHHHHHH
ARTWRVPMFIAAGDDDLTIQAESSLLYTHLRRAQNPAELRIVDGGHTWDVWRGLLAPGLK
HHEECCEEEEEECCCCEEEEECCHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHCCCCE
YTLDCVK
EEHEECC
>Mature Secondary Structure
MRRLAFPLALALIAGSIAAARATPVASAAPSGAAASSIATPAASGATLNPGSSIVLRTFR
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCCEECCCCHHHHHHHH
SASLQRDWSYTVYLPPGYNAEGARYPVMYLLHGNAGNANDWITQGRLQATADTLIERHEI
HHCCCCCCEEEEEECCCCCCCCCCCCEEEEEECCCCCCCHHHHCCCHHHHHHHHHHHHCC
PPVVIVMPQGGTDWYVDRKEKMQSAFLNDLLPEVEMHFAVSNQRAGRAIGGVSMGGFGAL
CCEEEEEECCCCCCEECHHHHHHHHHHHHHHHHHHEEEEECCCCCCCEECCCCCCCHHHH
RFALLEPGLFCGAMLLSPAIYANEPPLNSAARYVGVFGDRQFDARVWHELNYPALMRGYF
HHHHHCCCHHHHHHHHCCHHCCCCCCCCHHHHEEEECCCCCCCHHHHHCCCCHHHHHHHH
ARTWRVPMFIAAGDDDLTIQAESSLLYTHLRRAQNPAELRIVDGGHTWDVWRGLLAPGLK
HHEECCEEEEEECCCCEEEEECCHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHCCCCE
YTLDCVK
EEHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3139632; 7664125 [H]