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The map label for this gene is xylA [H]

Identifier: 189353064

GI number: 189353064

Start: 1235354

End: 1236676

Strand: Reverse

Name: xylA [H]

Synonym: BMULJ_04298

Alternate gene names: 189353064

Gene position: 1236676-1235354 (Counterclockwise)

Preceding gene: 189353070

Following gene: 189353063

Centisome position: 50.0

GC content: 66.67

Gene sequence:

>1323_bases
ATGTCGTATTTCGAACACATTCCCGCGATTCGCTACGAAGGGCCGCAGTCGGACAACCCGCTGGCCTACCACCACTACGA
CCGCACGAAGCGCGTGCTCGGCAAGACGCTCGAGGAGCATCTGCGGATCGCCGTCTGCTACTGGCACACGTTCGTGTGGC
CCGGTCACGACATTTTCGGGCAGGGCGCATTCCGGCGGCCGTGGCAGCAGCCGGGCGACGCGCTCGAGCGCGCGCGGCAG
AAGGCCGATGCCGCATTCGAGTTCTTCACGAAGCTCGGCACGCCGTTCTACACGTTCCACGACACCGACGTCGCGCCGGA
AGGCGACAGCCTGCGCGAGTACGTCGACAACTTCGCGCGGATGGTCGACTATCTCGGCGAGCGTCAGCAGGCGAGCGGCG
TGCGGCTGCTGTGGGGCACCGCGAACCTGTTCTCGCATCCGCGCTTCGCGGCGGGCGCCGCGACCAACCCGAACCCCGAC
GTCTTCGCGTGGGCCGCGACGCAGGTGCGCCATGCGCTGGACGCGACGCACCGGCTCGGCGGCGAGAACTACGTGCTGTG
GGGCGGCCGGGAAGGGTACGAAACGCTGCTCAATACCGATCTGAAGCGCGAGCGCGAGCAATTCGCGCGCTTCCTGTCGA
TGGTCGTCGAGCACAAGCATCGGATCGGCTTTCGCGGCGCGCTGCTGATCGAGCCGAAGCCGCAGGAGCCGACCAAGCAC
CAGTACGACTACGACGTCGCGACCGTGCACGGCTTCCTCACGCAATACGGGCTGCAGGACGAGATCCGCGTGAACATCGA
GGCGAATCATGCGACGCTCGCCGGTCATTCGTTCCATCACGAGATCGCGAACGCGTTCGCGCTCGGCGTGTTCGGCAGCG
TCGACGCGAACCGCGGCGATCCGCAGAACGGCTGGGACACCGATCAGTTTCCGAACAGCGTCGAGGAGCTCACGCTCGCG
TTCTACGAGATCCTGCGTCACGGCGGATTCACGACCGGCGGCATGAACTTCGACGCGAAGGTGCGGCGTCAGAGCGTCGA
TCCGGAAGATTTGTTCTACGGACATGTCGGCGCGATCGACGTGCTCGCGCTCGCGCTCGAACGCGCGGCCGTGCTCGTCG
AGAACGATCGGCTCGAAGCGATGCGCCGGCAGCGCTACGCGCAGTGGGACGACGCGTTCGGCCGCAAGATCCTGTCGGGC
GGCTATACGCTCGAATCGCTCGCGGCCGACGCGCTCGCGCGCGGCGTGAACCCGCAGCATGCGAGCGGCGCGCAGGAGCG
GCTCGAGAACATCGTGAACCAGGCGATTTACGCGCTGCGCTGA

Upstream 100 bases:

>100_bases
GCCGGCAGGCGCACGGGCACGATCCTGCCAGACCGCAACCCGGCGCCGCGCGTCGACGCGACGCACGCTGCGCTGCAACA
AGACACCGGACGGAGACGCC

Downstream 100 bases:

>100_bases
CGCCATGTACATCGGACTCGATCTCGGCACGTCGGGCGTGAAGGCCGTGCTGCTCGACCGCGACGGCACGGTGCGCGCGA
GCGCGACACGGCCGCTGACG

Product: xylose isomerase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 440; Mature: 439

Protein sequence:

>440_residues
MSYFEHIPAIRYEGPQSDNPLAYHHYDRTKRVLGKTLEEHLRIAVCYWHTFVWPGHDIFGQGAFRRPWQQPGDALERARQ
KADAAFEFFTKLGTPFYTFHDTDVAPEGDSLREYVDNFARMVDYLGERQQASGVRLLWGTANLFSHPRFAAGAATNPNPD
VFAWAATQVRHALDATHRLGGENYVLWGGREGYETLLNTDLKREREQFARFLSMVVEHKHRIGFRGALLIEPKPQEPTKH
QYDYDVATVHGFLTQYGLQDEIRVNIEANHATLAGHSFHHEIANAFALGVFGSVDANRGDPQNGWDTDQFPNSVEELTLA
FYEILRHGGFTTGGMNFDAKVRRQSVDPEDLFYGHVGAIDVLALALERAAVLVENDRLEAMRRQRYAQWDDAFGRKILSG
GYTLESLAADALARGVNPQHASGAQERLENIVNQAIYALR

Sequences:

>Translated_440_residues
MSYFEHIPAIRYEGPQSDNPLAYHHYDRTKRVLGKTLEEHLRIAVCYWHTFVWPGHDIFGQGAFRRPWQQPGDALERARQ
KADAAFEFFTKLGTPFYTFHDTDVAPEGDSLREYVDNFARMVDYLGERQQASGVRLLWGTANLFSHPRFAAGAATNPNPD
VFAWAATQVRHALDATHRLGGENYVLWGGREGYETLLNTDLKREREQFARFLSMVVEHKHRIGFRGALLIEPKPQEPTKH
QYDYDVATVHGFLTQYGLQDEIRVNIEANHATLAGHSFHHEIANAFALGVFGSVDANRGDPQNGWDTDQFPNSVEELTLA
FYEILRHGGFTTGGMNFDAKVRRQSVDPEDLFYGHVGAIDVLALALERAAVLVENDRLEAMRRQRYAQWDDAFGRKILSG
GYTLESLAADALARGVNPQHASGAQERLENIVNQAIYALR
>Mature_439_residues
SYFEHIPAIRYEGPQSDNPLAYHHYDRTKRVLGKTLEEHLRIAVCYWHTFVWPGHDIFGQGAFRRPWQQPGDALERARQK
ADAAFEFFTKLGTPFYTFHDTDVAPEGDSLREYVDNFARMVDYLGERQQASGVRLLWGTANLFSHPRFAAGAATNPNPDV
FAWAATQVRHALDATHRLGGENYVLWGGREGYETLLNTDLKREREQFARFLSMVVEHKHRIGFRGALLIEPKPQEPTKHQ
YDYDVATVHGFLTQYGLQDEIRVNIEANHATLAGHSFHHEIANAFALGVFGSVDANRGDPQNGWDTDQFPNSVEELTLAF
YEILRHGGFTTGGMNFDAKVRRQSVDPEDLFYGHVGAIDVLALALERAAVLVENDRLEAMRRQRYAQWDDAFGRKILSGG
YTLESLAADALARGVNPQHASGAQERLENIVNQAIYALR

Specific function: Unknown

COG id: COG2115

COG function: function code G; Xylose isomerase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the xylose isomerase family [H]

Homologues:

Organism=Escherichia coli, GI1789988, Length=436, Percent_Identity=66.9724770642202, Blast_Score=632, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013022
- InterPro:   IPR012307
- InterPro:   IPR013452
- InterPro:   IPR001998 [H]

Pfam domain/function: PF01261 AP_endonuc_2 [H]

EC number: =5.3.1.5 [H]

Molecular weight: Translated: 49844; Mature: 49713

Theoretical pI: Translated: 6.31; Mature: 6.31

Prosite motif: PS00172 XYLOSE_ISOMERASE_1 ; PS00173 XYLOSE_ISOMERASE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYFEHIPAIRYEGPQSDNPLAYHHYDRTKRVLGKTLEEHLRIAVCYWHTFVWPGHDIFG
CCHHHHCCCEEECCCCCCCCEEEEHHHHHHHHHHHHHHHHHHEHHEEEEHHCCCCCHHHC
QGAFRRPWQQPGDALERARQKADAAFEFFTKLGTPFYTFHDTDVAPEGDSLREYVDNFAR
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHH
MVDYLGERQQASGVRLLWGTANLFSHPRFAAGAATNPNPDVFAWAATQVRHALDATHRLG
HHHHHCCHHHCCCCEEEEECHHHHCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCC
GENYVLWGGREGYETLLNTDLKREREQFARFLSMVVEHKHRIGFRGALLIEPKPQEPTKH
CCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCC
QYDYDVATVHGFLTQYGLQDEIRVNIEANHATLAGHSFHHEIANAFALGVFGSVDANRGD
CCCCHHHHHHHHHHHHCCCCCEEEEEEECCEEECCCHHHHHHHHHHHHHHHCCCCCCCCC
PQNGWDTDQFPNSVEELTLAFYEILRHGGFTTGGMNFDAKVRRQSVDPEDLFYGHVGAID
CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCHHHHHHCCHHHHH
VLALALERAAVLVENDRLEAMRRQRYAQWDDAFGRKILSGGYTLESLAADALARGVNPQH
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCC
ASGAQERLENIVNQAIYALR
CCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SYFEHIPAIRYEGPQSDNPLAYHHYDRTKRVLGKTLEEHLRIAVCYWHTFVWPGHDIFG
CHHHHCCCEEECCCCCCCCEEEEHHHHHHHHHHHHHHHHHHEHHEEEEHHCCCCCHHHC
QGAFRRPWQQPGDALERARQKADAAFEFFTKLGTPFYTFHDTDVAPEGDSLREYVDNFAR
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHH
MVDYLGERQQASGVRLLWGTANLFSHPRFAAGAATNPNPDVFAWAATQVRHALDATHRLG
HHHHHCCHHHCCCCEEEEECHHHHCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCC
GENYVLWGGREGYETLLNTDLKREREQFARFLSMVVEHKHRIGFRGALLIEPKPQEPTKH
CCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCC
QYDYDVATVHGFLTQYGLQDEIRVNIEANHATLAGHSFHHEIANAFALGVFGSVDANRGD
CCCCHHHHHHHHHHHHCCCCCEEEEEEECCEEECCCHHHHHHHHHHHHHHHCCCCCCCCC
PQNGWDTDQFPNSVEELTLAFYEILRHGGFTTGGMNFDAKVRRQSVDPEDLFYGHVGAID
CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCHHHHHHCCHHHHH
VLALALERAAVLVENDRLEAMRRQRYAQWDDAFGRKILSGGYTLESLAADALARGVNPQH
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCC
ASGAQERLENIVNQAIYALR
CCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA