Click here to switch to the map view.

The map label for this gene is lrrA [H]

Identifier: 189352977

GI number: 189352977

Start: 1136838

End: 1137803

Strand: Reverse

Name: lrrA [H]

Synonym: BMULJ_04211

Alternate gene names: 189352977

Gene position: 1137803-1136838 (Counterclockwise)

Preceding gene: 189352980

Following gene: 189352974

Centisome position: 46.01

GC content: 66.98

Gene sequence:

>966_bases
ATGCAAGCAAAGAAACCGAAGAGCCGCGCGCTGCTCGGGCAGCTCAGCGACATGGATCTGCGGCTGCTGCGGGTCTTCAA
GGGCGTCGTCCAGTGCGGCGGGATGGCGGCGGCCGAACTCGAGCTGAATATCGGCATCTCGACGATCAGCCGGCACGTGA
AGGATCTCGAGACGCGGCTCGGGCTCGTGCTGTGCCGGCGCGGCCGCGCCGGCTTCACGCTGACGCCCGAAGGCCAGACC
GTCTACGAGGAGACGCTGCGGCTGCTCGCGTCGATGGAGGCGTTTCGCAGCCGGATCGACGGCATTCACGACCGGATGGG
CGGCGAACTGCACGTCGCCGTATTCGACAAGACCGCGACCAACCCGAACGCAAGGCTCGGCGACGCGATCCGCCAGTTCG
CGGACGAGGCGCCCGACGTCGCGCTGAACCTGCACGTCGCGTCGATCAACGAGGTCGAACGCGGGATCATCGACGGCAGT
TATCAGGTCGGGATCATCCCCGCCCACCGCAGTTCGGGCAGCCTCGTCTATTCGGAACTCTTCGACGAACGGATGCTGCT
GTACTGCGGCCGTCAGCATCCGCTGTTCGATGCGCCGCACGGCAAGCTGACCTGGACGACGATCCGCAATCATGCGTTCG
CCGGGCTCGGCTTCCATTCGCCGAACATGGAGCTCAGCCATCGCGCGAAGCTCACGCGCAGCGCGACCGCGTCGGACCAG
GAATCGATCGCGACGCTGATTCTGTCGGGGCGCTATCTCGGCTTCCTGCCCGACCATTACGCGGAAAGCTTCGAGAAAAA
GGGGCTGATGCAGCCGATCGCGCCGCACCGCTTCAATTACCTGTGCCGCTTCGTCAGCCTGCTGCGGCGCTCGCCGCGGC
CGTCGCGCGCGGCGCTGCTGTTCCAGTCGTGCCTCGAAGCCGCGCACGCGGCGACGCGCGCGGACGAGCGCGGCAGCGCG
TCCTAG

Upstream 100 bases:

>100_bases
TCGGCGCGGCGCGCCCCTCCTCCTCGTGATGATGTTGCGCATTGTCGGGACGACAATTAGTCTTTTGAATATCGCAATAT
CAATGTTCACTTGCGCAACT

Downstream 100 bases:

>100_bases
CGGCCGGAGGCCGGCTGCCGGCGGCGCGCCGGCCGGCCAGCCGTCACGCGCGGTCGTCGCGCGCCGCGCCGCTGCGTTGC
TGCGCGCGCACTTGCGCCAG

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 321; Mature: 321

Protein sequence:

>321_residues
MQAKKPKSRALLGQLSDMDLRLLRVFKGVVQCGGMAAAELELNIGISTISRHVKDLETRLGLVLCRRGRAGFTLTPEGQT
VYEETLRLLASMEAFRSRIDGIHDRMGGELHVAVFDKTATNPNARLGDAIRQFADEAPDVALNLHVASINEVERGIIDGS
YQVGIIPAHRSSGSLVYSELFDERMLLYCGRQHPLFDAPHGKLTWTTIRNHAFAGLGFHSPNMELSHRAKLTRSATASDQ
ESIATLILSGRYLGFLPDHYAESFEKKGLMQPIAPHRFNYLCRFVSLLRRSPRPSRAALLFQSCLEAAHAATRADERGSA
S

Sequences:

>Translated_321_residues
MQAKKPKSRALLGQLSDMDLRLLRVFKGVVQCGGMAAAELELNIGISTISRHVKDLETRLGLVLCRRGRAGFTLTPEGQT
VYEETLRLLASMEAFRSRIDGIHDRMGGELHVAVFDKTATNPNARLGDAIRQFADEAPDVALNLHVASINEVERGIIDGS
YQVGIIPAHRSSGSLVYSELFDERMLLYCGRQHPLFDAPHGKLTWTTIRNHAFAGLGFHSPNMELSHRAKLTRSATASDQ
ESIATLILSGRYLGFLPDHYAESFEKKGLMQPIAPHRFNYLCRFVSLLRRSPRPSRAALLFQSCLEAAHAATRADERGSA
S
>Mature_321_residues
MQAKKPKSRALLGQLSDMDLRLLRVFKGVVQCGGMAAAELELNIGISTISRHVKDLETRLGLVLCRRGRAGFTLTPEGQT
VYEETLRLLASMEAFRSRIDGIHDRMGGELHVAVFDKTATNPNARLGDAIRQFADEAPDVALNLHVASINEVERGIIDGS
YQVGIIPAHRSSGSLVYSELFDERMLLYCGRQHPLFDAPHGKLTWTTIRNHAFAGLGFHSPNMELSHRAKLTRSATASDQ
ESIATLILSGRYLGFLPDHYAESFEKKGLMQPIAPHRFNYLCRFVSLLRRSPRPSRAALLFQSCLEAAHAATRADERGSA
S

Specific function: Unknown

COG id: COG0583

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 35507; Mature: 35507

Theoretical pI: Translated: 9.20; Mature: 9.20

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQAKKPKSRALLGQLSDMDLRLLRVFKGVVQCGGMAAAELELNIGISTISRHVKDLETRL
CCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCEEEEEEEECCHHHHHHHHHHHHHHH
GLVLCRRGRAGFTLTPEGQTVYEETLRLLASMEAFRSRIDGIHDRMGGELHVAVFDKTAT
HHHHHCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCC
NPNARLGDAIRQFADEAPDVALNLHVASINEVERGIIDGSYQVGIIPAHRSSGSLVYSEL
CCCCHHHHHHHHHHHCCCCEEEEEEEEHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHH
FDERMLLYCGRQHPLFDAPHGKLTWTTIRNHAFAGLGFHSPNMELSHRAKLTRSATASDQ
HHHHHHHHCCCCCCCCCCCCCCEEEEEECCCEEEECCCCCCCCCHHHHHHHHHHCCCCCH
ESIATLILSGRYLGFLPDHYAESFEKKGLMQPIAPHRFNYLCRFVSLLRRSPRPSRAALL
HHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHH
FQSCLEAAHAATRADERGSAS
HHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MQAKKPKSRALLGQLSDMDLRLLRVFKGVVQCGGMAAAELELNIGISTISRHVKDLETRL
CCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCEEEEEEEECCHHHHHHHHHHHHHHH
GLVLCRRGRAGFTLTPEGQTVYEETLRLLASMEAFRSRIDGIHDRMGGELHVAVFDKTAT
HHHHHCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCC
NPNARLGDAIRQFADEAPDVALNLHVASINEVERGIIDGSYQVGIIPAHRSSGSLVYSEL
CCCCHHHHHHHHHHHCCCCEEEEEEEEHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHH
FDERMLLYCGRQHPLFDAPHGKLTWTTIRNHAFAGLGFHSPNMELSHRAKLTRSATASDQ
HHHHHHHHCCCCCCCCCCCCCCEEEEEECCCEEEECCCCCCCCCHHHHHHHHHHCCCCCH
ESIATLILSGRYLGFLPDHYAESFEKKGLMQPIAPHRFNYLCRFVSLLRRSPRPSRAALL
HHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHH
FQSCLEAAHAATRADERGSAS
HHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8661945 [H]