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The map label for this gene is ydfG [H]

Identifier: 189352947

GI number: 189352947

Start: 1102455

End: 1102892

Strand: Reverse

Name: ydfG [H]

Synonym: BMULJ_04181

Alternate gene names: 189352947

Gene position: 1102892-1102455 (Counterclockwise)

Preceding gene: 189352948

Following gene: 189352946

Centisome position: 44.59

GC content: 64.38

Gene sequence:

>438_bases
ATGCAACCGCGTCTGAACTTCTATGCCGCCAGCCCGAATGCGATCAAGGTGATGCGCAACGCCGAGGACTTCCTCGCGAA
AAGCTCGATCGAAAAGCCGCTCGCGGAGCTCGTCCGCCTGCGCGCGTCGCAGATCAACGGCTGCGCGTTCTGCGTCGACA
TGCATACGACCGACGCGCGCAAAGGCGGCGAAACCGATCGCCGTCTCGCGACCGTCGTCGCCTGGCGCGAAACGCCGTTC
TTCACCGCACGCGAGCGCGCCGCGCTCGAATGGACCGAGGCACTGACGCTGGTCGCCGAGGACCACGTGCCCGATGCCGT
GTGGGAATCGGTGAAGCCGCACTTCAGCGACGAGGAGCTGTTCGACCTGTCGCTACTGATCGCGACGATCAACGCGTGGA
ATCGCTTTGCGATCGCGTTCCGCAAGATGCCCGAGTGA

Upstream 100 bases:

>100_bases
CACCTGATATTTCCCGAAATTGGCCATTCAAGCAGGCCAGTACGGCTCGTAAAGTGGGTCCATCGCGCCACCGTGCGCTC
CAACCGAAAGAGGACCTGCG

Downstream 100 bases:

>100_bases
GGTGCATACGATGAAGACCCGCACCTCCCTTCGCCGCACGCTCGTCGGCGCAGTGCTCGCGCTCGGCGCCGTGTCGATCG
TGCCGACGCACGCACACCAG

Product: alkylhydroperoxidase AhpD core

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 145; Mature: 145

Protein sequence:

>145_residues
MQPRLNFYAASPNAIKVMRNAEDFLAKSSIEKPLAELVRLRASQINGCAFCVDMHTTDARKGGETDRRLATVVAWRETPF
FTARERAALEWTEALTLVAEDHVPDAVWESVKPHFSDEELFDLSLLIATINAWNRFAIAFRKMPE

Sequences:

>Translated_145_residues
MQPRLNFYAASPNAIKVMRNAEDFLAKSSIEKPLAELVRLRASQINGCAFCVDMHTTDARKGGETDRRLATVVAWRETPF
FTARERAALEWTEALTLVAEDHVPDAVWESVKPHFSDEELFDLSLLIATINAWNRFAIAFRKMPE
>Mature_145_residues
MQPRLNFYAASPNAIKVMRNAEDFLAKSSIEKPLAELVRLRASQINGCAFCVDMHTTDARKGGETDRRLATVVAWRETPF
FTARERAALEWTEALTLVAEDHVPDAVWESVKPHFSDEELFDLSLLIATINAWNRFAIAFRKMPE

Specific function: Unknown

COG id: COG2128

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788050, Length=111, Percent_Identity=36.036036036036, Blast_Score=61, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004675
- InterPro:   IPR003779 [H]

Pfam domain/function: PF02627 CMD [H]

EC number: NA

Molecular weight: Translated: 16482; Mature: 16482

Theoretical pI: Translated: 5.72; Mature: 5.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQPRLNFYAASPNAIKVMRNAEDFLAKSSIEKPLAELVRLRASQINGCAFCVDMHTTDAR
CCCCCEEEECCCCCEEHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCC
KGGETDRRLATVVAWRETPFFTARERAALEWTEALTLVAEDHVPDAVWESVKPHFSDEEL
CCCCCHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCHH
FDLSLLIATINAWNRFAIAFRKMPE
HHHHHHHHHHHHHHHHHHHEECCCC
>Mature Secondary Structure
MQPRLNFYAASPNAIKVMRNAEDFLAKSSIEKPLAELVRLRASQINGCAFCVDMHTTDAR
CCCCCEEEECCCCCEEHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCC
KGGETDRRLATVVAWRETPFFTARERAALEWTEALTLVAEDHVPDAVWESVKPHFSDEEL
CCCCCHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCHH
FDLSLLIATINAWNRFAIAFRKMPE
HHHHHHHHHHHHHHHHHHHEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]