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The map label for this gene is fdfT

Identifier: 189352944

GI number: 189352944

Start: 1099206

End: 1100261

Strand: Direct

Name: fdfT

Synonym: BMULJ_04178

Alternate gene names: NA

Gene position: 1099206-1100261 (Clockwise)

Preceding gene: 189352942

Following gene: 189352945

Centisome position: 44.45

GC content: 69.7

Gene sequence:

>1056_bases
ATGACGACTCATACCGATCCCGCCTATCTGCTCGGCGACCTGCTGAAGAACGTTTCCCGCTCCTTCTATCTGACGCTGCG
CGTGCTGCCCGACGGCATGCGCGAGCCGGTCGGTCTCGCGTATCTGCTCGCGCGCGCGGCCGACACGATCGCCGACACGG
CGCTCGTCGTGCCCGAGCGGCGCGCGGCGCTGCTGAACGCGCTGCGCGACGAGATCGAGCGGCTCGGCGACGGCGTCGCG
CTGTCGGCCGCACTCGACGACGTGACGCAGATGCAGACCGATTCGCACGAGCACGTGCTGCTCGGCTCGATGCGGCCGAT
GCTCGCGCTGCTGCGCGCGCAGCCGGACGCGGACCGCACGTCGATCCGCAAGGTCGTCGCGACGCTGACGTCGGGCATGG
AATTCGACCTGCGCACGTTCCCGGACGAGCAGTCGGGGCAGCTCGCGGTGCTGCCGACGCGCGACGTGCTCGACCGCTAT
ACGTATCTCGTCGCCGGCTGCGTCGGCGAGTTCTGGACCGACATGACGGCCATGCATACGCGCGCCGCGCGCGGCTGGGA
CGCGCCGGCGATGCGCGAGCGCGGAATCCGCTTCGGCAAGGCGCTGCAGATGACGAACATCCTGCGCGACTGCGCGAAGG
ATCTGCGGATCGGCCGCTGCTATCTGCCGGAGGACGTGCTCGCCGCGCACGGGCTGCGCGCGGCCGATCTGCTCGCCCCC
GATGCGTATCGGCGCGCGCGCGGCGTGCTGTTCGACCTGCTGCGCCTCGCGCTCGACCAGTATCGAGATGCCTGTACCTA
TACGGTGGCGATTCCGCGCCGCTTCGTGCGGTTGCGGCTCGCGTGCCTGTGGCCGATCCTGATCGGCCTCGAAACGCTCG
AACTGCTGGCCGGCCACGACGGCTGGCTCGATCCGGCGAAACCGGCCAAGGTGCCGAGAAAGCGCATCTATCGAATCATG
GCGTCGTCGCTCGCGTTCGTCGGATCGAACGCGGCGATCCGCGCGCGCATCGCCGCGCTCGTCGACGCGGTCGACGCACG
GATCGCATCGCGGTAA

Upstream 100 bases:

>100_bases
GACGCCGTGCGGGCGCGACGATGCGGCGACTCGCGGGCCGGCGCGGGCGCCCATGCGCCGTACGTGCGCGGGTGCCGCGC
CGGCCGATTTTTCCGAATCC

Downstream 100 bases:

>100_bases
TCGGCACGGCAAGCATCGCCCCGCGGCGCGGTTGCCGCCGGCGTTCCTCTCTCGCGGCCCGCGTTCGCCGGGCCGCGCGT
TTCCTCCGACGGCGGTCGCC

Product: squalene/phytoene synthase

Products: NA

Alternate protein names: Farnesyl-Diphosphate Farnesyltransferase; Squalene Synthase; Squalene/Phytoene Synthase Family Protein; Squalene And Phytoene Synthase; Squalene Synthetase; Phytoene/Squalene Synthetase Family Protein; Squalene/Phytoene Synthase-Like Protein; Phytoene/Squalene Synthetase; SQS PSY Squalene/Phytoene Synthase-Like Protein

Number of amino acids: Translated: 351; Mature: 350

Protein sequence:

>351_residues
MTTHTDPAYLLGDLLKNVSRSFYLTLRVLPDGMREPVGLAYLLARAADTIADTALVVPERRAALLNALRDEIERLGDGVA
LSAALDDVTQMQTDSHEHVLLGSMRPMLALLRAQPDADRTSIRKVVATLTSGMEFDLRTFPDEQSGQLAVLPTRDVLDRY
TYLVAGCVGEFWTDMTAMHTRAARGWDAPAMRERGIRFGKALQMTNILRDCAKDLRIGRCYLPEDVLAAHGLRAADLLAP
DAYRRARGVLFDLLRLALDQYRDACTYTVAIPRRFVRLRLACLWPILIGLETLELLAGHDGWLDPAKPAKVPRKRIYRIM
ASSLAFVGSNAAIRARIAALVDAVDARIASR

Sequences:

>Translated_351_residues
MTTHTDPAYLLGDLLKNVSRSFYLTLRVLPDGMREPVGLAYLLARAADTIADTALVVPERRAALLNALRDEIERLGDGVA
LSAALDDVTQMQTDSHEHVLLGSMRPMLALLRAQPDADRTSIRKVVATLTSGMEFDLRTFPDEQSGQLAVLPTRDVLDRY
TYLVAGCVGEFWTDMTAMHTRAARGWDAPAMRERGIRFGKALQMTNILRDCAKDLRIGRCYLPEDVLAAHGLRAADLLAP
DAYRRARGVLFDLLRLALDQYRDACTYTVAIPRRFVRLRLACLWPILIGLETLELLAGHDGWLDPAKPAKVPRKRIYRIM
ASSLAFVGSNAAIRARIAALVDAVDARIASR
>Mature_350_residues
TTHTDPAYLLGDLLKNVSRSFYLTLRVLPDGMREPVGLAYLLARAADTIADTALVVPERRAALLNALRDEIERLGDGVAL
SAALDDVTQMQTDSHEHVLLGSMRPMLALLRAQPDADRTSIRKVVATLTSGMEFDLRTFPDEQSGQLAVLPTRDVLDRYT
YLVAGCVGEFWTDMTAMHTRAARGWDAPAMRERGIRFGKALQMTNILRDCAKDLRIGRCYLPEDVLAAHGLRAADLLAPD
AYRRARGVLFDLLRLALDQYRDACTYTVAIPRRFVRLRLACLWPILIGLETLELLAGHDGWLDPAKPAKVPRKRIYRIMA
SSLAFVGSNAAIRARIAALVDAVDARIASR

Specific function: Unknown

COG id: COG1562

COG function: function code I; Phytoene/squalene synthetase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38921; Mature: 38790

Theoretical pI: Translated: 8.92; Mature: 8.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTHTDPAYLLGDLLKNVSRSFYLTLRVLPDGMREPVGLAYLLARAADTIADTALVVPER
CCCCCCHHHHHHHHHHHCCHHEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHH
RAALLNALRDEIERLGDGVALSAALDDVTQMQTDSHEHVLLGSMRPMLALLRAQPDADRT
HHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHCCCCCHHH
SIRKVVATLTSGMEFDLRTFPDEQSGQLAVLPTRDVLDRYTYLVAGCVGEFWTDMTAMHT
HHHHHHHHHHCCCCCCHHCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHH
RAARGWDAPAMRERGIRFGKALQMTNILRDCAKDLRIGRCYLPEDVLAAHGLRAADLLAP
HHHCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCHHHHCCC
DAYRRARGVLFDLLRLALDQYRDACTYTVAIPRRFVRLRLACLWPILIGLETLELLAGHD
HHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GWLDPAKPAKVPRKRIYRIMASSLAFVGSNAAIRARIAALVDAVDARIASR
CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TTHTDPAYLLGDLLKNVSRSFYLTLRVLPDGMREPVGLAYLLARAADTIADTALVVPER
CCCCCHHHHHHHHHHHCCHHEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHH
RAALLNALRDEIERLGDGVALSAALDDVTQMQTDSHEHVLLGSMRPMLALLRAQPDADRT
HHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHCCCCCHHH
SIRKVVATLTSGMEFDLRTFPDEQSGQLAVLPTRDVLDRYTYLVAGCVGEFWTDMTAMHT
HHHHHHHHHHCCCCCCHHCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHH
RAARGWDAPAMRERGIRFGKALQMTNILRDCAKDLRIGRCYLPEDVLAAHGLRAADLLAP
HHHCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCHHHHCCC
DAYRRARGVLFDLLRLALDQYRDACTYTVAIPRRFVRLRLACLWPILIGLETLELLAGHD
HHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GWLDPAKPAKVPRKRIYRIMASSLAFVGSNAAIRARIAALVDAVDARIASR
CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA