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The map label for this gene is yusT [H]

Identifier: 189352940

GI number: 189352940

Start: 1094342

End: 1095253

Strand: Reverse

Name: yusT [H]

Synonym: BMULJ_04174

Alternate gene names: 189352940

Gene position: 1095253-1094342 (Counterclockwise)

Preceding gene: 189352943

Following gene: 189352938

Centisome position: 44.29

GC content: 71.82

Gene sequence:

>912_bases
ATGAAAATTAGCGATATCGACGCTTTTGCAGCGGTCGTTCGCTGCCAGACGCTGAGCCAGGCCGCGGCCGAGCTCGGCAT
GACGCAGCCCGCGATCACGCGGCGCGTACAGAACCTCGAGGAAGCGCTCGGCGTGACGCTGCTCGACCGCAACACGAAAC
CGCCGCGCCCGACCGACATCGGCCGGCAGGTGTTCGACCAGTGCCGCGCGATCCTGCGCGAAGTCGACGCGCTGCGCGAG
CTGACGGCCGCACGGCGGCCGCCCGCCGGCGCATTCCGCATCGGCATCACGCAGGGCCTCGGCGAGCGCATGCTGCCCGA
GCTGATCGCGCGGCTCGCGAGCCGATGGCCGGCGCTCGCGACGCAGGTCACGACCGCCTGGGGCGGCGTGCTCGTCGAGC
GCATCGCGCGGCGCGAACTCGACGCCGCGCTCGTGTTTCTCGCGCGCGAAATGGTGCTGCCGCCGGCGGTCGAAGGCGAA
CGACTGCTGGCGACGCGGCTCGTCGCGATCGGCCGCAAGGGCGACTGGCCGCGCCGCAGCTATCGGCTCGCCGACTGCCA
TGCGCGCGGCTGGGTGCTCAATCCGGACGGTTGCGGCTTTCGCGCGGGCCTGCGCCGCGCGCTCGACGCCCAAGGGCTGC
CGATGCCGGTCGCGCTCGACGCGTACGGCCGCGACCTGCAGTTGCAGAGCGTCGCGAACGGCATCGGCATCGGTCTGATG
CCGCTGCCGCTCGTCGAATGCAGTCCGCTGCGCGATGCGCTCGAGATCGTGCCGCTCGCCGATTTCAAGCCGCAGATCGA
TCTGTGGCTGCTGCGCCGGCAGGATGCGGCGCGCTTCGCGGCGCCGCTCGATGCGATCGCCGCGCAGGCGCGCGACGCAT
TCGCGCCGAGCGCACAGGACGAAGCCGCGTAA

Upstream 100 bases:

>100_bases
GACTGATGCAACGAAAGCGTACTCATCGACCGGCTCCTCGAATATGATGGCCACCATGATGGATCGTCATGATGCACCGG
AAATACCATGCAGAACAAAC

Downstream 100 bases:

>100_bases
GCGGCGGCCGGCGCATGCGTCGTGCGTGGCACGGCGCTCGCTGGCGGGCGCACGCCGCGGCTCATGCATCGCGCCGGCAC
GATACGGGGGCGTGAGACGT

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 303; Mature: 303

Protein sequence:

>303_residues
MKISDIDAFAAVVRCQTLSQAAAELGMTQPAITRRVQNLEEALGVTLLDRNTKPPRPTDIGRQVFDQCRAILREVDALRE
LTAARRPPAGAFRIGITQGLGERMLPELIARLASRWPALATQVTTAWGGVLVERIARRELDAALVFLAREMVLPPAVEGE
RLLATRLVAIGRKGDWPRRSYRLADCHARGWVLNPDGCGFRAGLRRALDAQGLPMPVALDAYGRDLQLQSVANGIGIGLM
PLPLVECSPLRDALEIVPLADFKPQIDLWLLRRQDAARFAAPLDAIAAQARDAFAPSAQDEAA

Sequences:

>Translated_303_residues
MKISDIDAFAAVVRCQTLSQAAAELGMTQPAITRRVQNLEEALGVTLLDRNTKPPRPTDIGRQVFDQCRAILREVDALRE
LTAARRPPAGAFRIGITQGLGERMLPELIARLASRWPALATQVTTAWGGVLVERIARRELDAALVFLAREMVLPPAVEGE
RLLATRLVAIGRKGDWPRRSYRLADCHARGWVLNPDGCGFRAGLRRALDAQGLPMPVALDAYGRDLQLQSVANGIGIGLM
PLPLVECSPLRDALEIVPLADFKPQIDLWLLRRQDAARFAAPLDAIAAQARDAFAPSAQDEAA
>Mature_303_residues
MKISDIDAFAAVVRCQTLSQAAAELGMTQPAITRRVQNLEEALGVTLLDRNTKPPRPTDIGRQVFDQCRAILREVDALRE
LTAARRPPAGAFRIGITQGLGERMLPELIARLASRWPALATQVTTAWGGVLVERIARRELDAALVFLAREMVLPPAVEGE
RLLATRLVAIGRKGDWPRRSYRLADCHARGWVLNPDGCGFRAGLRRALDAQGLPMPVALDAYGRDLQLQSVANGIGIGLM
PLPLVECSPLRDALEIVPLADFKPQIDLWLLRRQDAARFAAPLDAIAAQARDAFAPSAQDEAA

Specific function: Hydrogen Peroxide Sensor. Activates The Expression Of A Regulon Of Hydrogen Peroxide-Inducible Genes Such As Katg, Gor, Ahpc, Ahpf, Oxys (A Regulatory RNA), Dps, Fur And Grxa. Oxyr Expression Is Negatively Autoregulated By Binding To A 43 Bp Region Upstre

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1790399, Length=305, Percent_Identity=25.5737704918033, Blast_Score=79, Evalue=4e-16,
Organism=Escherichia coli, GI1787806, Length=287, Percent_Identity=24.0418118466899, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1787601, Length=293, Percent_Identity=24.9146757679181, Blast_Score=74, Evalue=9e-15,
Organism=Escherichia coli, GI1789639, Length=126, Percent_Identity=31.7460317460317, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1788297, Length=243, Percent_Identity=24.6913580246914, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI157672245, Length=149, Percent_Identity=30.2013422818792, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1787589, Length=299, Percent_Identity=25.752508361204, Blast_Score=65, Evalue=6e-12,
Organism=Escherichia coli, GI1786401, Length=128, Percent_Identity=32.03125, Blast_Score=62, Evalue=4e-11,
Organism=Escherichia coli, GI1789440, Length=120, Percent_Identity=30, Blast_Score=62, Evalue=5e-11,
Organism=Escherichia coli, GI1788481, Length=249, Percent_Identity=22.4899598393574, Blast_Score=62, Evalue=7e-11,
Organism=Escherichia coli, GI1788748, Length=285, Percent_Identity=25.9649122807018, Blast_Score=61, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 33041; Mature: 33041

Theoretical pI: Translated: 8.78; Mature: 8.78

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKISDIDAFAAVVRCQTLSQAAAELGMTQPAITRRVQNLEEALGVTLLDRNTKPPRPTDI
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCEEEECCCCCCCCCHHH
GRQVFDQCRAILREVDALRELTAARRPPAGAFRIGITQGLGERMLPELIARLASRWPALA
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCHHHH
TQVTTAWGGVLVERIARRELDAALVFLAREMVLPPAVEGERLLATRLVAIGRKGDWPRRS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCC
YRLADCHARGWVLNPDGCGFRAGLRRALDAQGLPMPVALDAYGRDLQLQSVANGIGIGLM
CEEHHHCCCCCEECCCCCCHHHHHHHHHCCCCCCCCEEECCCCCCEEHHHHHCCCCCCCC
PLPLVECSPLRDALEIVPLADFKPQIDLWLLRRQDAARFAAPLDAIAAQARDAFAPSAQD
CCCCCCCCCHHHHHHHCCCCCCCCCCHHHEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
EAA
CCC
>Mature Secondary Structure
MKISDIDAFAAVVRCQTLSQAAAELGMTQPAITRRVQNLEEALGVTLLDRNTKPPRPTDI
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCEEEECCCCCCCCCHHH
GRQVFDQCRAILREVDALRELTAARRPPAGAFRIGITQGLGERMLPELIARLASRWPALA
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCHHHH
TQVTTAWGGVLVERIARRELDAALVFLAREMVLPPAVEGERLLATRLVAIGRKGDWPRRS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCC
YRLADCHARGWVLNPDGCGFRAGLRRALDAQGLPMPVALDAYGRDLQLQSVANGIGIGLM
CEEHHHCCCCCEECCCCCCHHHHHHHHHCCCCCCCCEEECCCCCCEEHHHHHCCCCCCCC
PLPLVECSPLRDALEIVPLADFKPQIDLWLLRRQDAARFAAPLDAIAAQARDAFAPSAQD
CCCCCCCCCHHHHHHHCCCCCCCCCCHHHEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
EAA
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]