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The map label for this gene is omp32 [H]

Identifier: 189352909

GI number: 189352909

Start: 1054369

End: 1055451

Strand: Reverse

Name: omp32 [H]

Synonym: BMULJ_04143

Alternate gene names: 189352909

Gene position: 1055451-1054369 (Counterclockwise)

Preceding gene: 189352910

Following gene: 189352906

Centisome position: 42.68

GC content: 66.2

Gene sequence:

>1083_bases
ATGAAGTCACGTTCCCTTCGCGCCGCCGTTCTGACCGGCTCGGCCGCCGTCGCCGGTCTCGCGGCCGGTGCCGCGCACGC
GCAATCGTCGGTCACGCTGTACGGGATCATGGATGCCGGCATCGAGTACACGAACCACGCGGCGCCGGAAGGCGGCAGCT
CGGTCAAGCTGAAGTCGGGTAACAAGAACACGTCGCGCTGGGGTTTGCGCGGCGTCGAGGATCTCGGCGGCGGCCTGAAG
GCCGTGTTCCGGCTCGAAAGCGGCATCGATCTCGCGAACGGCGCATTCGACGACGGCCCCGACTCGATCTTCGCGCGCCG
TGCGACGGTCGGCCTGAAAGGCAAATGGGGCGAGCTGACGCTCGGCCGCAACTACACCGTCACCTACGACTACCTGCTGC
CGTTCGACCCGATGGGTTATGCGCAGAACTACTCGTGGGCGACCTCGTCGACGGCGACCGGCGGCCGCAAGGACGGCATG
TTCACGCGCTCGTCGAACGCCGTGCGTTACGACGGCGAGTTCGGCGGCTTCAAGTTCGGCGCGATGTACGGCTTCGGCAA
CGTGCCGGGCAGCGTGAAGACCAGCTCGAAATACGACGTCGCGCTCGGCTACGAGACGGGCCCGTTCGCGGCCGTGGTCA
CGTTCGACCGGCAGAACGGCGCGGCCGACAGCGTGACGCCCGCCGACACGGTCAACTACATCCAGGGGATCCACGCGGGC
CTCAGCTACGACTTCGGCAACCTGAAGACGATGGCCGGTTACCGCAACTATCGGCGCACGTTTCACACGAGCGCCGCGAA
CCAGTTGAGCGACACGTACTGGGTCGGCGGGTCGTATCAGTTCACGCCGACGTTCTCGCTGATCGCTGCCGTCTATCACC
AGGACATCAAGGGCGGCACCGACGCCGATCCGACGCTCGTGTCGATGCGCGCGAACTACGCGCTGTCGAAGCGCACGGTG
CTGTATCTGTCGGGCGCGTTCGCGATCGCGAAGCACGATCAGAAGGTCGGCGTGTCGCGCGATTTCGCGGGGTATGGCAC
GACGCAGGTCGGCGTGACGGCGGGGATTCAGCAGCGGTTTTGA

Upstream 100 bases:

>100_bases
TCGCGTGCATTTGCGCGCGGACGGCCGGCGGCGTCCGCCGCGGCCGGCTGCGCGCCGCATCCGTTTCACCTCAACCACAA
GAACCAAGGAGACACCGTCA

Downstream 100 bases:

>100_bases
TGTCTCGCTTGATGACGCGGGCGACGGCACGCACGTCGCCCACGACGCCGCACAGCGGTCAGCGTTCAAGCTCCCGTCGT
GAACACCGTACGAACGGCAC

Product: outer membrane porin

Products: NA

Alternate protein names: OMP32 [H]

Number of amino acids: Translated: 360; Mature: 360

Protein sequence:

>360_residues
MKSRSLRAAVLTGSAAVAGLAAGAAHAQSSVTLYGIMDAGIEYTNHAAPEGGSSVKLKSGNKNTSRWGLRGVEDLGGGLK
AVFRLESGIDLANGAFDDGPDSIFARRATVGLKGKWGELTLGRNYTVTYDYLLPFDPMGYAQNYSWATSSTATGGRKDGM
FTRSSNAVRYDGEFGGFKFGAMYGFGNVPGSVKTSSKYDVALGYETGPFAAVVTFDRQNGAADSVTPADTVNYIQGIHAG
LSYDFGNLKTMAGYRNYRRTFHTSAANQLSDTYWVGGSYQFTPTFSLIAAVYHQDIKGGTDADPTLVSMRANYALSKRTV
LYLSGAFAIAKHDQKVGVSRDFAGYGTTQVGVTAGIQQRF

Sequences:

>Translated_360_residues
MKSRSLRAAVLTGSAAVAGLAAGAAHAQSSVTLYGIMDAGIEYTNHAAPEGGSSVKLKSGNKNTSRWGLRGVEDLGGGLK
AVFRLESGIDLANGAFDDGPDSIFARRATVGLKGKWGELTLGRNYTVTYDYLLPFDPMGYAQNYSWATSSTATGGRKDGM
FTRSSNAVRYDGEFGGFKFGAMYGFGNVPGSVKTSSKYDVALGYETGPFAAVVTFDRQNGAADSVTPADTVNYIQGIHAG
LSYDFGNLKTMAGYRNYRRTFHTSAANQLSDTYWVGGSYQFTPTFSLIAAVYHQDIKGGTDADPTLVSMRANYALSKRTV
LYLSGAFAIAKHDQKVGVSRDFAGYGTTQVGVTAGIQQRF
>Mature_360_residues
MKSRSLRAAVLTGSAAVAGLAAGAAHAQSSVTLYGIMDAGIEYTNHAAPEGGSSVKLKSGNKNTSRWGLRGVEDLGGGLK
AVFRLESGIDLANGAFDDGPDSIFARRATVGLKGKWGELTLGRNYTVTYDYLLPFDPMGYAQNYSWATSSTATGGRKDGM
FTRSSNAVRYDGEFGGFKFGAMYGFGNVPGSVKTSSKYDVALGYETGPFAAVVTFDRQNGAADSVTPADTVNYIQGIHAG
LSYDFGNLKTMAGYRNYRRTFHTSAANQLSDTYWVGGSYQFTPTFSLIAAVYHQDIKGGTDADPTLVSMRANYALSKRTV
LYLSGAFAIAKHDQKVGVSRDFAGYGTTQVGVTAGIQQRF

Specific function: Forms anion selective channels [H]

COG id: COG3203

COG function: function code M; Outer membrane protein (porin)

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To bacterial outer membrane proteins and porins [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001702
- InterPro:   IPR002299 [H]

Pfam domain/function: PF00267 Porin_1 [H]

EC number: NA

Molecular weight: Translated: 38279; Mature: 38279

Theoretical pI: Translated: 9.61; Mature: 9.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSRSLRAAVLTGSAAVAGLAAGAAHAQSSVTLYGIMDAGIEYTNHAAPEGGSSVKLKSG
CCCCCEEEEEEECCHHHHHHHHHHHHCCCCEEEEEEEECCCEECCCCCCCCCCEEEEECC
NKNTSRWGLRGVEDLGGGLKAVFRLESGIDLANGAFDDGPDSIFARRATVGLKGKWGELT
CCCCCCCCCCCHHHHCCHHEEEEECCCCCCCCCCCCCCCCHHHHHHHEEECCCCCCCEEE
LGRNYTVTYDYLLPFDPMGYAQNYSWATSSTATGGRKDGMFTRSSNAVRYDGEFGGFKFG
ECCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEECCCCCCEEEE
AMYGFGNVPGSVKTSSKYDVALGYETGPFAAVVTFDRQNGAADSVTPADTVNYIQGIHAG
EEEECCCCCCCCCCCCCEEEEEECCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHCC
LSYDFGNLKTMAGYRNYRRTFHTSAANQLSDTYWVGGSYQFTPTFSLIAAVYHQDIKGGT
CEECCCCEEHHHHHHHHHHHHHHHHHHHCCCEEEECCEEEECHHHHHHHHHHHHHCCCCC
DADPTLVSMRANYALSKRTVLYLSGAFAIAKHDQKVGVSRDFAGYGTTQVGVTAGIQQRF
CCCCEEEEEECCCEECCEEEEEEECEEEEEECCCCCCCCCCCCCCCCCEEEEECCHHHCC
>Mature Secondary Structure
MKSRSLRAAVLTGSAAVAGLAAGAAHAQSSVTLYGIMDAGIEYTNHAAPEGGSSVKLKSG
CCCCCEEEEEEECCHHHHHHHHHHHHCCCCEEEEEEEECCCEECCCCCCCCCCEEEEECC
NKNTSRWGLRGVEDLGGGLKAVFRLESGIDLANGAFDDGPDSIFARRATVGLKGKWGELT
CCCCCCCCCCCHHHHCCHHEEEEECCCCCCCCCCCCCCCCHHHHHHHEEECCCCCCCEEE
LGRNYTVTYDYLLPFDPMGYAQNYSWATSSTATGGRKDGMFTRSSNAVRYDGEFGGFKFG
ECCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEECCCCCCEEEE
AMYGFGNVPGSVKTSSKYDVALGYETGPFAAVVTFDRQNGAADSVTPADTVNYIQGIHAG
EEEECCCCCCCCCCCCCEEEEEECCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHCC
LSYDFGNLKTMAGYRNYRRTFHTSAANQLSDTYWVGGSYQFTPTFSLIAAVYHQDIKGGT
CEECCCCEEHHHHHHHHHHHHHHHHHHHCCCEEEECCEEEECHHHHHHHHHHHHHCCCCC
DADPTLVSMRANYALSKRTVLYLSGAFAIAKHDQKVGVSRDFAGYGTTQVGVTAGIQQRF
CCCCEEEEEECCCEECCEEEEEEECEEEEEECCCCCCCCCCCCCCCCCEEEEECCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1848840 [H]