| Definition | Burkholderia multivorans ATCC 17616 chromosome 2, complete genome. |
|---|---|
| Accession | NC_010805 |
| Length | 2,473,162 |
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The map label for this gene is gsiD [H]
Identifier: 189352851
GI number: 189352851
Start: 977436
End: 978329
Strand: Direct
Name: gsiD [H]
Synonym: BMULJ_04085
Alternate gene names: 189352851
Gene position: 977436-978329 (Clockwise)
Preceding gene: 189352850
Following gene: 189352852
Centisome position: 39.52
GC content: 67.34
Gene sequence:
>894_bases ATGAACGCAACCGTTCCAGGCCCGACCGCGCCCGCCGAAACCGCCGTGCGCACGCCGTGGCGCGAATTCTGGCGCAAGTT CCGCAAGCAGACCGTCGCGCTCGTCGCCGGCGGATTCGTGCTGATGCTCGTCGTGCTCGCGTTCGTCGGCCCGCACGTCG TGCCGTTCGATCCGGAGAACTACTTCGACTACGACGCGCTGAACGCGGGCCCGTCGGCCGTGCACTGGTTCGGCGTCGAT TCGCTCGGCCGCGACATCTTCAGCCGCATCGTCGCGGGCACGCGGATCTCGCTTGCGGCCGGCTTCTTCTCGGTCGCGCT CGGCGCGCTGATCGGCACGCTGTTCGGGCTGCTTGCCGGCTACTACGAAGGCTGGTGGGACCGCATCACGATGCGCATCG CCGACGTGCTGTTCGCGTTTCCCGGCATCCTGCTCGCGATCGGCGTCGTCGCGATTCTCGGCAACGGGATGGTCAACGTG ATCTGCGCGGTCGCTATCTTCAGCATCCCGGCGTTCGCGCGGCTCGTGCGCGGCAACACGCTGATGCTCAAGCACATGAC CTACGTCGAGGCCGCGCGCAGCATCGGCGCGTCCGACTGGACGATCATCATGCGGCACATCCTGCCGGGCACCGTGTCGT CGGTCGTCGTCTACTTCACGATGCGCATCGGCACCTCGATCATCACGGCCGCGAGTCTGTCGTTCCTCGGGCTCGGCGCG CAGCCGCCGACGCCCGAGTGGGGCGCAATGTTGAACGAAGCGCGTGCGGACATGGTCGCCGCGCCGCACGTCGCGATTTT TCCGAGCCTCGCGATCTTCCTGACCGTGCTCGCATTCAATCTGCTCGGCGACGGCCTGCGCGACGCGCTCGACCCGAAAC TGGAGCGTCGCTGA
Upstream 100 bases:
>100_bases ATCGTGCTGCTGTTCTCGCTCGAATTCATCCTGATCAACCTGACCGTCGACGTGCTCTACGCGGTCATCAATCCGACCAT CCGGTTCAAGTGAGGTGCGC
Downstream 100 bases:
>100_bases TGCGCACCGTGCCGAGGTGGAGCGGCGCGTTGCCTGCCGGCCCGCGCAACACGATCGCCGACGTGCCGGGCGTGACGGTC GGCCATTGCACGCTCGACGA
Product: peptide/nickel transport system permease protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 297; Mature: 297
Protein sequence:
>297_residues MNATVPGPTAPAETAVRTPWREFWRKFRKQTVALVAGGFVLMLVVLAFVGPHVVPFDPENYFDYDALNAGPSAVHWFGVD SLGRDIFSRIVAGTRISLAAGFFSVALGALIGTLFGLLAGYYEGWWDRITMRIADVLFAFPGILLAIGVVAILGNGMVNV ICAVAIFSIPAFARLVRGNTLMLKHMTYVEAARSIGASDWTIIMRHILPGTVSSVVVYFTMRIGTSIITAASLSFLGLGA QPPTPEWGAMLNEARADMVAAPHVAIFPSLAIFLTVLAFNLLGDGLRDALDPKLERR
Sequences:
>Translated_297_residues MNATVPGPTAPAETAVRTPWREFWRKFRKQTVALVAGGFVLMLVVLAFVGPHVVPFDPENYFDYDALNAGPSAVHWFGVD SLGRDIFSRIVAGTRISLAAGFFSVALGALIGTLFGLLAGYYEGWWDRITMRIADVLFAFPGILLAIGVVAILGNGMVNV ICAVAIFSIPAFARLVRGNTLMLKHMTYVEAARSIGASDWTIIMRHILPGTVSSVVVYFTMRIGTSIITAASLSFLGLGA QPPTPEWGAMLNEARADMVAAPHVAIFPSLAIFLTVLAFNLLGDGLRDALDPKLERR >Mature_297_residues MNATVPGPTAPAETAVRTPWREFWRKFRKQTVALVAGGFVLMLVVLAFVGPHVVPFDPENYFDYDALNAGPSAVHWFGVD SLGRDIFSRIVAGTRISLAAGFFSVALGALIGTLFGLLAGYYEGWWDRITMRIADVLFAFPGILLAIGVVAILGNGMVNV ICAVAIFSIPAFARLVRGNTLMLKHMTYVEAARSIGASDWTIIMRHILPGTVSSVVVYFTMRIGTSIITAASLSFLGLGA QPPTPEWGAMLNEARADMVAAPHVAIFPSLAIFLTVLAFNLLGDGLRDALDPKLERR
Specific function: Part of the ABC transporter complex gsiABCD involved in glutathione import. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG1173
COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1787054, Length=280, Percent_Identity=77.1428571428572, Blast_Score=446, Evalue=1e-127, Organism=Escherichia coli, GI1787760, Length=255, Percent_Identity=43.5294117647059, Blast_Score=211, Evalue=6e-56, Organism=Escherichia coli, GI1789964, Length=285, Percent_Identity=40.7017543859649, Blast_Score=177, Evalue=5e-46, Organism=Escherichia coli, GI1789889, Length=241, Percent_Identity=40.6639004149378, Blast_Score=174, Evalue=7e-45, Organism=Escherichia coli, GI1787498, Length=295, Percent_Identity=35.9322033898305, Blast_Score=166, Evalue=2e-42, Organism=Escherichia coli, GI1787549, Length=280, Percent_Identity=33.9285714285714, Blast_Score=130, Evalue=1e-31, Organism=Escherichia coli, GI1788505, Length=225, Percent_Identity=32.4444444444444, Blast_Score=117, Evalue=1e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 32026; Mature: 32026
Theoretical pI: Translated: 9.01; Mature: 9.01
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNATVPGPTAPAETAVRTPWREFWRKFRKQTVALVAGGFVLMLVVLAFVGPHVVPFDPEN CCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC YFDYDALNAGPSAVHWFGVDSLGRDIFSRIVAGTRISLAAGFFSVALGALIGTLFGLLAG CCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH YYEGWWDRITMRIADVLFAFPGILLAIGVVAILGNGMVNVICAVAIFSIPAFARLVRGNT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCC LMLKHMTYVEAARSIGASDWTIIMRHILPGTVSSVVVYFTMRIGTSIITAASLSFLGLGA HHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC QPPTPEWGAMLNEARADMVAAPHVAIFPSLAIFLTVLAFNLLGDGLRDALDPKLERR CCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MNATVPGPTAPAETAVRTPWREFWRKFRKQTVALVAGGFVLMLVVLAFVGPHVVPFDPEN CCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC YFDYDALNAGPSAVHWFGVDSLGRDIFSRIVAGTRISLAAGFFSVALGALIGTLFGLLAG CCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH YYEGWWDRITMRIADVLFAFPGILLAIGVVAILGNGMVNVICAVAIFSIPAFARLVRGNT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCC LMLKHMTYVEAARSIGASDWTIIMRHILPGTVSSVVVYFTMRIGTSIITAASLSFLGLGA HHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC QPPTPEWGAMLNEARADMVAAPHVAIFPSLAIFLTVLAFNLLGDGLRDALDPKLERR CCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA