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The map label for this gene is yodT [H]

Identifier: 189352778

GI number: 189352778

Start: 891771

End: 893105

Strand: Direct

Name: yodT [H]

Synonym: BMULJ_04010

Alternate gene names: 189352778

Gene position: 891771-893105 (Clockwise)

Preceding gene: 189352777

Following gene: 189352779

Centisome position: 36.06

GC content: 67.94

Gene sequence:

>1335_bases
ATGACGACCGTTTTCCATCGCGCGCCGCGCGCCACCTTGCCCGTCGCCGTGGCCGGCGACGGCATCGAGATCATCGATTC
GACCGGCAAACGTTACATCGACGCCTGCGGCGGCGCGGCCGTCTCGTGTCTCGGCCACAGCAACCAGCGCGTGATCGACG
CGATCAAGCGGCAGGTACAGCAACTGCCGTATGCGCATACGTCGTTCTTCACGACCGACGCGGCCGAGGAACTCGCCGAC
CGGCTCGTCGCCGCGGCGCCGGCCGGCCTCGAACACGTGTACTTCGTGTCGGGCGGCTCCGAGGCGATCGAGGCCGCGCT
GAAGCTCGCGCGACAGTATTTCGTCGAGAAGGGCGAGCCGCAGCGTCGCCACTTCATCGCGCGCCGGCAGAGCTATCACG
GCAACACGCTCGGCGCGCTCGCAATCGGCGGCAATGCGTGGCGGCGCGAGCCGTTCCTGCCGCTGCTGATCGAAGCGCAT
CACGTGAGCCCGTGCTACGCGTACCGCGAACAGCGCGCCGATGAAACCGAGGAGGCGTTCGCGCAGCGCCTCGCCGACGA
ACTCGAAGGCAAGATCGTCGAGCTCGGCGCGGAAAACGTCGCGGCGTTCGTCGCGGAAACGGTGGTCGGCGCGACGGCCG
GCGCCGTGCCGCCGGTGCGCACGTACCTGAAGAAGATCCGTGCCGTGTGCGACAAGTACGGCGTGCTGCTGATTCTCGAC
GAGATCATGTCGGGGATGGGGCGCACCGGCTATCTGTTCGCCTGCGAAGAGGACGGCGTCGCGCCCGATCTGCTGACGAT
CGCGAAGGGGCTGGGCGCCGGCTATCAGCCGATCGGCGCGACGCTCGTCAGCGACCGCATTTATCGGACGATCGTCGACG
GATCGGGCTTCTTCCAGCACGGCCATACGTATCTCGGCCATGCGACCGCGTGCGCGGCCGCGCTCGAAGTGCAGCGCGTG
ATCGCCGAAGAGAAACTGCTCGACAACGTGCACGCGCGCGGCGAGCAGTTGCGCGCGGCACTGCGTGCGCGTTACGACGC
GCATCCGCATGTCGGCGACGTGCGCGGCCGCGGGCTGTTCGTCGGCGTCGAACTCGTGCGCGATCGCGACAGCAAGGCAA
CGTTCGATCCCGCGCTGAAGCTGCATGCGACGATCAAGCGCGAGGCGATGCAGCGCGGTTTGATGGTCTATCCGATGGGC
GGTACGATCGACGGGCGCCACGGCGACCACATCCTGATCGCGCCGCCGTTCATTTGTACCGCGCAGCAGATCGACGCGAT
CGTCGAGCGGCTGTCGGACGCGATCGACGCGGCGCTGGTCGCCGCGCGCGCATGA

Upstream 100 bases:

>100_bases
CGATCGACTTCACGATTCATCAGCACGGCGCCGCGTGTTACGCGACGCGCATCGTGCCCGACGCACGCGCGCACGGCGCG
CACTGACCATGAGGCAACGC

Downstream 100 bases:

>100_bases
CGACGCCCGGACGCACACGTTGCGGCGCTTGCCGCGTTCACCTTTTCATCGACCGTTGATCGTGATGACAGACAGACTGC
CTCCATTCGATGCCGCCACC

Product: hypothetical protein

Products: L-Glutamate; L-Glutamate 5-semialdehyde [C]

Alternate protein names: NA

Number of amino acids: Translated: 444; Mature: 443

Protein sequence:

>444_residues
MTTVFHRAPRATLPVAVAGDGIEIIDSTGKRYIDACGGAAVSCLGHSNQRVIDAIKRQVQQLPYAHTSFFTTDAAEELAD
RLVAAAPAGLEHVYFVSGGSEAIEAALKLARQYFVEKGEPQRRHFIARRQSYHGNTLGALAIGGNAWRREPFLPLLIEAH
HVSPCYAYREQRADETEEAFAQRLADELEGKIVELGAENVAAFVAETVVGATAGAVPPVRTYLKKIRAVCDKYGVLLILD
EIMSGMGRTGYLFACEEDGVAPDLLTIAKGLGAGYQPIGATLVSDRIYRTIVDGSGFFQHGHTYLGHATACAAALEVQRV
IAEEKLLDNVHARGEQLRAALRARYDAHPHVGDVRGRGLFVGVELVRDRDSKATFDPALKLHATIKREAMQRGLMVYPMG
GTIDGRHGDHILIAPPFICTAQQIDAIVERLSDAIDAALVAARA

Sequences:

>Translated_444_residues
MTTVFHRAPRATLPVAVAGDGIEIIDSTGKRYIDACGGAAVSCLGHSNQRVIDAIKRQVQQLPYAHTSFFTTDAAEELAD
RLVAAAPAGLEHVYFVSGGSEAIEAALKLARQYFVEKGEPQRRHFIARRQSYHGNTLGALAIGGNAWRREPFLPLLIEAH
HVSPCYAYREQRADETEEAFAQRLADELEGKIVELGAENVAAFVAETVVGATAGAVPPVRTYLKKIRAVCDKYGVLLILD
EIMSGMGRTGYLFACEEDGVAPDLLTIAKGLGAGYQPIGATLVSDRIYRTIVDGSGFFQHGHTYLGHATACAAALEVQRV
IAEEKLLDNVHARGEQLRAALRARYDAHPHVGDVRGRGLFVGVELVRDRDSKATFDPALKLHATIKREAMQRGLMVYPMG
GTIDGRHGDHILIAPPFICTAQQIDAIVERLSDAIDAALVAARA
>Mature_443_residues
TTVFHRAPRATLPVAVAGDGIEIIDSTGKRYIDACGGAAVSCLGHSNQRVIDAIKRQVQQLPYAHTSFFTTDAAEELADR
LVAAAPAGLEHVYFVSGGSEAIEAALKLARQYFVEKGEPQRRHFIARRQSYHGNTLGALAIGGNAWRREPFLPLLIEAHH
VSPCYAYREQRADETEEAFAQRLADELEGKIVELGAENVAAFVAETVVGATAGAVPPVRTYLKKIRAVCDKYGVLLILDE
IMSGMGRTGYLFACEEDGVAPDLLTIAKGLGAGYQPIGATLVSDRIYRTIVDGSGFFQHGHTYLGHATACAAALEVQRVI
AEEKLLDNVHARGEQLRAALRARYDAHPHVGDVRGRGLFVGVELVRDRDSKATFDPALKLHATIKREAMQRGLMVYPMGG
TIDGRHGDHILIAPPFICTAQQIDAIVERLSDAIDAALVAARA

Specific function: Unknown

COG id: COG0161

COG function: function code H; Adenosylmethionine-8-amino-7-oxononanoate aminotransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family [H]

Homologues:

Organism=Homo sapiens, GI37574042, Length=439, Percent_Identity=28.4738041002278, Blast_Score=141, Evalue=1e-33,
Organism=Homo sapiens, GI226442705, Length=431, Percent_Identity=28.0742459396752, Blast_Score=140, Evalue=2e-33,
Organism=Homo sapiens, GI4557809, Length=429, Percent_Identity=29.1375291375291, Blast_Score=139, Evalue=4e-33,
Organism=Homo sapiens, GI226442709, Length=399, Percent_Identity=28.8220551378446, Blast_Score=134, Evalue=2e-31,
Organism=Homo sapiens, GI13994255, Length=433, Percent_Identity=27.7136258660508, Blast_Score=132, Evalue=5e-31,
Organism=Homo sapiens, GI24119277, Length=430, Percent_Identity=28.1395348837209, Blast_Score=125, Evalue=9e-29,
Organism=Homo sapiens, GI284507298, Length=342, Percent_Identity=29.5321637426901, Blast_Score=113, Evalue=4e-25,
Organism=Escherichia coli, GI145693181, Length=425, Percent_Identity=32.2352941176471, Blast_Score=211, Evalue=7e-56,
Organism=Escherichia coli, GI1788044, Length=430, Percent_Identity=30.6976744186047, Blast_Score=176, Evalue=3e-45,
Organism=Escherichia coli, GI1786991, Length=435, Percent_Identity=30.8045977011494, Blast_Score=169, Evalue=4e-43,
Organism=Escherichia coli, GI1789016, Length=424, Percent_Identity=30.8962264150943, Blast_Score=168, Evalue=5e-43,
Organism=Escherichia coli, GI1789759, Length=360, Percent_Identity=33.0555555555556, Blast_Score=166, Evalue=4e-42,
Organism=Escherichia coli, GI1787560, Length=412, Percent_Identity=29.126213592233, Blast_Score=137, Evalue=1e-33,
Organism=Escherichia coli, GI1786349, Length=325, Percent_Identity=26.7692307692308, Blast_Score=81, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI32564660, Length=442, Percent_Identity=31.2217194570136, Blast_Score=162, Evalue=3e-40,
Organism=Caenorhabditis elegans, GI25144271, Length=433, Percent_Identity=28.8683602771363, Blast_Score=154, Evalue=1e-37,
Organism=Caenorhabditis elegans, GI71992977, Length=429, Percent_Identity=27.5058275058275, Blast_Score=152, Evalue=4e-37,
Organism=Caenorhabditis elegans, GI25144274, Length=240, Percent_Identity=34.1666666666667, Blast_Score=129, Evalue=3e-30,
Organism=Saccharomyces cerevisiae, GI6324432, Length=351, Percent_Identity=30.7692307692308, Blast_Score=156, Evalue=7e-39,
Organism=Saccharomyces cerevisiae, GI6323470, Length=446, Percent_Identity=29.372197309417, Blast_Score=145, Evalue=2e-35,
Organism=Saccharomyces cerevisiae, GI6324386, Length=477, Percent_Identity=23.4800838574423, Blast_Score=122, Evalue=9e-29,
Organism=Saccharomyces cerevisiae, GI6321456, Length=380, Percent_Identity=22.8947368421053, Blast_Score=76, Evalue=1e-14,
Organism=Drosophila melanogaster, GI21357415, Length=433, Percent_Identity=30.4849884526559, Blast_Score=167, Evalue=2e-41,
Organism=Drosophila melanogaster, GI161085790, Length=443, Percent_Identity=28.2167042889391, Blast_Score=143, Evalue=2e-34,
Organism=Drosophila melanogaster, GI28574759, Length=447, Percent_Identity=28.6353467561521, Blast_Score=141, Evalue=1e-33,
Organism=Drosophila melanogaster, GI21356575, Length=432, Percent_Identity=27.3148148148148, Blast_Score=133, Evalue=2e-31,
Organism=Drosophila melanogaster, GI281366494, Length=391, Percent_Identity=24.0409207161125, Blast_Score=89, Evalue=5e-18,
Organism=Drosophila melanogaster, GI24667139, Length=391, Percent_Identity=24.0409207161125, Blast_Score=89, Evalue=5e-18,
Organism=Drosophila melanogaster, GI24667143, Length=391, Percent_Identity=24.0409207161125, Blast_Score=89, Evalue=5e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005814
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF00202 Aminotran_3 [H]

EC number: 2.6.1.13 [C]

Molecular weight: Translated: 48023; Mature: 47892

Theoretical pI: Translated: 6.76; Mature: 6.76

Prosite motif: PS00600 AA_TRANSFER_CLASS_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTVFHRAPRATLPVAVAGDGIEIIDSTGKRYIDACGGAAVSCLGHSNQRVIDAIKRQVQ
CCCCCCCCCCCCCCEEEECCCCHHHHHCCHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHH
QLPYAHTSFFTTDAAEELADRLVAAAPAGLEHVYFVSGGSEAIEAALKLARQYFVEKGEP
HCCCHHHHHEEHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCH
QRRHFIARRQSYHGNTLGALAIGGNAWRREPFLPLLIEAHHVSPCYAYREQRADETEEAF
HHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCEEEEEECCCCHHHHHHHHCCCHHHHHH
AQRLADELEGKIVELGAENVAAFVAETVVGATAGAVPPVRTYLKKIRAVCDKYGVLLILD
HHHHHHHHCCEEEEECHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCHHHHHH
EIMSGMGRTGYLFACEEDGVAPDLLTIAKGLGAGYQPIGATLVSDRIYRTIVDGSGFFQH
HHHHCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCHHHC
GHTYLGHATACAAALEVQRVIAEEKLLDNVHARGEQLRAALRARYDAHPHVGDVRGRGLF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEE
VGVELVRDRDSKATFDPALKLHATIKREAMQRGLMVYPMGGTIDGRHGDHILIAPPFICT
EEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCEEEEECCCEECCCCCCEEEECCCCHHH
AQQIDAIVERLSDAIDAALVAARA
HHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TTVFHRAPRATLPVAVAGDGIEIIDSTGKRYIDACGGAAVSCLGHSNQRVIDAIKRQVQ
CCCCCCCCCCCCCEEEECCCCHHHHHCCHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHH
QLPYAHTSFFTTDAAEELADRLVAAAPAGLEHVYFVSGGSEAIEAALKLARQYFVEKGEP
HCCCHHHHHEEHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCH
QRRHFIARRQSYHGNTLGALAIGGNAWRREPFLPLLIEAHHVSPCYAYREQRADETEEAF
HHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCEEEEEECCCCHHHHHHHHCCCHHHHHH
AQRLADELEGKIVELGAENVAAFVAETVVGATAGAVPPVRTYLKKIRAVCDKYGVLLILD
HHHHHHHHCCEEEEECHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCHHHHHH
EIMSGMGRTGYLFACEEDGVAPDLLTIAKGLGAGYQPIGATLVSDRIYRTIVDGSGFFQH
HHHHCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCHHHC
GHTYLGHATACAAALEVQRVIAEEKLLDNVHARGEQLRAALRARYDAHPHVGDVRGRGLF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEE
VGVELVRDRDSKATFDPALKLHATIKREAMQRGLMVYPMGGTIDGRHGDHILIAPPFICT
EEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCEEEEECCCEECCCCCCEEEECCCCHHH
AQQIDAIVERLSDAIDAALVAARA
HHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: Pyridoxal Phosphate. [C]

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: 2-Oxoglutarate; Ornithine [C]

Specific reaction: 2-Oxoglutarate + Ornithine --> L-Glutamate + L-Glutamate 5-semialdehyde [C]

General reaction: Amino group transfer [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9734814; 9384377 [H]