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The map label for this gene is alr [H]

Identifier: 189352774

GI number: 189352774

Start: 888260

End: 889381

Strand: Reverse

Name: alr [H]

Synonym: BMULJ_04006

Alternate gene names: 189352774

Gene position: 889381-888260 (Counterclockwise)

Preceding gene: 189352776

Following gene: 189352767

Centisome position: 35.96

GC content: 71.12

Gene sequence:

>1122_bases
ATGCCCCGTCCCATCGTCGCCCATATCCGTCCCGACGCCGTCCGCCACAACCTCGACTTCATCCGCCGGACGGCCGCGCA
GTCGCGCGTGTGGGCCGTCGTGAAGGCCAACGCATACGGCCACGGCATCGAGCGCATCTATCCGGGCCTCGCGGCCGCCG
ACGGCATCGCGCTGCTCGACCTCGACGAAGCGGTACGCGTGCGCGAGCTCGGCTGGGACAAGCCCGTGCTGCTGCTCGAA
GGGATCTTCGAGCCGGCCGACGTCGAACTCGTCGAGCGCCATCAGCTGACGGTCGCCGTTCACTGCGACGAGCAGCTCGA
TCTGCTGATCGCGGCCAAGCCGCAGCAGCCGATCGACATCCAGCTGAAGATGAATTCCGGAATGAACCGGCTCGGCTACC
GGCCCGACGCATTCCGCGCCGCGTGGGAGCGCGCGGCGAGCGCGCCGTCGATCGGCCGGATCACGCTGATGATGCATTTC
GCGAATGCGGACGAAGGCGAAATCGACTGGCAGCTCGCGCAGTTCGACGCCGCCACGGCCGGCATTCCCGGCGAGCGCAC
GCTGTCGAATTCGGCCGCCGTGCTCTGGCATCCGCGCGCGCATCGCGACTGGGTGCGGCCCGGCACGATCCTGTACGGCG
CCTCGCCGACCGGCGCGGCGCGGCACATCGCCGATACGCCGCTGATGGCCGCGATGACGCTGACGAGCAAGATCATCGGC
GTGCAGACGCTCGCGGCCGGCGAGACGGTCGGCTACGGCCGCCGTTTCACGGCCGAGCGGCCGATGCGGATCGGCGTCGT
CGCGTGCGGCTACGCGGACGGCTATCCGCGTCACGCGCCGACCGGCACGCCGATCGCGGTGGACGGCGTGCTCACGCGCG
TCGTCGGCCGCGTGTCGATGGACATGCTGACGGTCGACCTCACGCCGTGCCCGAACGCGGGGATCGGCTCGAGCGTCGAG
CTCTGGGGCGATCGGGTGAAGGTGGACGACGTGGCCGAAGCGAGCGGCACGATCGGCTACGAGCTGATGTGCGCGCTCGC
GCGCCGCGTGCCGGTCGCGATCGTGCCGCCGGGCGCGTCGACGCTCCAGCCCGCGCTGCGCACCGGCAGCTACGGGCGCT
GA

Upstream 100 bases:

>100_bases
AACACCAATAAGATAGCGGTCGACACTGGCTCGACGCATTCTCGCGCGAGCCTGCCCCGCGCCGCCGCGCGTGCCCACGA
CCATCGATACGAGCCCCGAC

Downstream 100 bases:

>100_bases
ACGCGCGGCGCGCGCGTCGCCGCGTTCCGGTCAGCGCCGCGCCGATCGTAGCGCAGCGCCCGCGCCCCGCTACGCGCGCC
ACGTCGGCGCGCGCTTTTCC

Product: alanine racemase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 373; Mature: 372

Protein sequence:

>373_residues
MPRPIVAHIRPDAVRHNLDFIRRTAAQSRVWAVVKANAYGHGIERIYPGLAAADGIALLDLDEAVRVRELGWDKPVLLLE
GIFEPADVELVERHQLTVAVHCDEQLDLLIAAKPQQPIDIQLKMNSGMNRLGYRPDAFRAAWERAASAPSIGRITLMMHF
ANADEGEIDWQLAQFDAATAGIPGERTLSNSAAVLWHPRAHRDWVRPGTILYGASPTGAARHIADTPLMAAMTLTSKIIG
VQTLAAGETVGYGRRFTAERPMRIGVVACGYADGYPRHAPTGTPIAVDGVLTRVVGRVSMDMLTVDLTPCPNAGIGSSVE
LWGDRVKVDDVAEASGTIGYELMCALARRVPVAIVPPGASTLQPALRTGSYGR

Sequences:

>Translated_373_residues
MPRPIVAHIRPDAVRHNLDFIRRTAAQSRVWAVVKANAYGHGIERIYPGLAAADGIALLDLDEAVRVRELGWDKPVLLLE
GIFEPADVELVERHQLTVAVHCDEQLDLLIAAKPQQPIDIQLKMNSGMNRLGYRPDAFRAAWERAASAPSIGRITLMMHF
ANADEGEIDWQLAQFDAATAGIPGERTLSNSAAVLWHPRAHRDWVRPGTILYGASPTGAARHIADTPLMAAMTLTSKIIG
VQTLAAGETVGYGRRFTAERPMRIGVVACGYADGYPRHAPTGTPIAVDGVLTRVVGRVSMDMLTVDLTPCPNAGIGSSVE
LWGDRVKVDDVAEASGTIGYELMCALARRVPVAIVPPGASTLQPALRTGSYGR
>Mature_372_residues
PRPIVAHIRPDAVRHNLDFIRRTAAQSRVWAVVKANAYGHGIERIYPGLAAADGIALLDLDEAVRVRELGWDKPVLLLEG
IFEPADVELVERHQLTVAVHCDEQLDLLIAAKPQQPIDIQLKMNSGMNRLGYRPDAFRAAWERAASAPSIGRITLMMHFA
NADEGEIDWQLAQFDAATAGIPGERTLSNSAAVLWHPRAHRDWVRPGTILYGASPTGAARHIADTPLMAAMTLTSKIIGV
QTLAAGETVGYGRRFTAERPMRIGVVACGYADGYPRHAPTGTPIAVDGVLTRVVGRVSMDMLTVDLTPCPNAGIGSSVEL
WGDRVKVDDVAEASGTIGYELMCALARRVPVAIVPPGASTLQPALRTGSYGR

Specific function: Provides the D-alanine required for cell wall biosynthesis [H]

COG id: COG0787

COG function: function code M; Alanine racemase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the alanine racemase family [H]

Homologues:

Organism=Escherichia coli, GI1787439, Length=356, Percent_Identity=58.7078651685393, Blast_Score=430, Evalue=1e-121,
Organism=Escherichia coli, GI1790487, Length=347, Percent_Identity=43.2276657060519, Blast_Score=271, Evalue=5e-74,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000821
- InterPro:   IPR009006
- InterPro:   IPR011079
- InterPro:   IPR001608
- InterPro:   IPR020622 [H]

Pfam domain/function: PF00842 Ala_racemase_C; PF01168 Ala_racemase_N [H]

EC number: =5.1.1.1 [H]

Molecular weight: Translated: 40236; Mature: 40105

Theoretical pI: Translated: 7.06; Mature: 7.06

Prosite motif: PS00395 ALANINE_RACEMASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRPIVAHIRPDAVRHNLDFIRRTAAQSRVWAVVKANAYGHGIERIYPGLAAADGIALLD
CCCCEEEECCCHHHHHHHHHHHHHHHHCEEEEEEEECCCCCCHHHHCCCCHHCCCEEEEE
LDEAVRVRELGWDKPVLLLEGIFEPADVELVERHQLTVAVHCDEQLDLLIAAKPQQPIDI
CHHHHHHHHCCCCCCCHHHHCCCCCCCHHEEECCEEEEEEECCCCEEEEEEECCCCCEEE
QLKMNSGMNRLGYRPDAFRAAWERAASAPSIGRITLMMHFANADEGEIDWQLAQFDAATA
EEEECCCCHHCCCCCHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCEEEEEEEECCHHC
GIPGERTLSNSAAVLWHPRAHRDWVRPGTILYGASPTGAARHIADTPLMAAMTLTSKIIG
CCCCCCCCCCCEEEEECCCCCCCCCCCCEEEECCCCCCCHHHHCCCHHHHHHHHHHHHHH
VQTLAAGETVGYGRRFTAERPMRIGVVACGYADGYPRHAPTGTPIAVDGVLTRVVGRVSM
HEEECCCCCCCCCCEECCCCCEEEEEEEEECCCCCCCCCCCCCCEEHHHHHHHHHHHHEE
DMLTVDLTPCPNAGIGSSVELWGDRVKVDDVAEASGTIGYELMCALARRVPVAIVPPGAS
EEEEEECCCCCCCCCCCCHHCCCCEEEECHHHHCCCCCHHHHHHHHHHCCCEEEECCCCH
TLQPALRTGSYGR
HHHHHHHCCCCCC
>Mature Secondary Structure 
PRPIVAHIRPDAVRHNLDFIRRTAAQSRVWAVVKANAYGHGIERIYPGLAAADGIALLD
CCCEEEECCCHHHHHHHHHHHHHHHHCEEEEEEEECCCCCCHHHHCCCCHHCCCEEEEE
LDEAVRVRELGWDKPVLLLEGIFEPADVELVERHQLTVAVHCDEQLDLLIAAKPQQPIDI
CHHHHHHHHCCCCCCCHHHHCCCCCCCHHEEECCEEEEEEECCCCEEEEEEECCCCCEEE
QLKMNSGMNRLGYRPDAFRAAWERAASAPSIGRITLMMHFANADEGEIDWQLAQFDAATA
EEEECCCCHHCCCCCHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCEEEEEEEECCHHC
GIPGERTLSNSAAVLWHPRAHRDWVRPGTILYGASPTGAARHIADTPLMAAMTLTSKIIG
CCCCCCCCCCCEEEEECCCCCCCCCCCCEEEECCCCCCCHHHHCCCHHHHHHHHHHHHHH
VQTLAAGETVGYGRRFTAERPMRIGVVACGYADGYPRHAPTGTPIAVDGVLTRVVGRVSM
HEEECCCCCCCCCCEECCCCCEEEEEEEEECCCCCCCCCCCCCCEEHHHHHHHHHHHHEE
DMLTVDLTPCPNAGIGSSVELWGDRVKVDDVAEASGTIGYELMCALARRVPVAIVPPGAS
EEEEEECCCCCCCCCCCCHHCCCCEEEECHHHHCCCCCHHHHHHHHHHCCCEEEECCCCH
TLQPALRTGSYGR
HHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA