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The map label for this gene is ydeL [H]

Identifier: 189352764

GI number: 189352764

Start: 877144

End: 878673

Strand: Reverse

Name: ydeL [H]

Synonym: BMULJ_03996

Alternate gene names: 189352764

Gene position: 878673-877144 (Counterclockwise)

Preceding gene: 189352767

Following gene: 189352763

Centisome position: 35.53

GC content: 68.69

Gene sequence:

>1530_bases
ATGTCGAGCCGTACCCCGACCGCGTTATGGGCGCAGCAGTTCCGGCGGTCGTCGACGTCGAAGACGAGCCTGCAGGACCA
GATCCGGCGCATGCTCGTCGCCGCGATCCTCGACGGTCAGCTGCCGCCGGACGCCGCGCTGCCGTCGAGCCGCGAACTGG
CCGACCAGCTCGGCGTCGCGCGCAACACGGTCGTGCTCGCGTACCAGATGCTCGTCGAAGAGGGGTACTTGATCTCGCGC
GAGCGCAGCGGCCATTTCGTGAATCCGAAGATGCTCGAAGGGCTGCCGGGCTTCACGCCTGCGCCGCCCGAAGCGAAGCC
GGACAGCGACGACGATGCGGGCCGCCCCGCGTGGCACGAGCGGATCGCGCATCCGCCGTCGAGGCAGCGCAACATCGTGA
AGCCCGCGAACTGGCAGCACTACGAATTCCCGTTCATCTACGGGCAGTTCGACCAGTCGCTGTTTCCGACCAACGACTGG
CGCGAATGCTGCCTGAAGGCGCTGTCGGTGATGGAGATCCGCAACTGGGCGCCGGACCTGATCGAACGCGACGACGAATC
GCTGATCCAGCAGATCCGCACACGCGTGCTGCCGCGGCGCGGCGTGTTCGCGATGCCGGACGAGATCGTCGTGACGAACG
GCTGCCAGCAAGCGCTGTACCTGATCGCGGACCTGCTGTGCGGCAAGCACACGACGGTCGGCTTCGAGAATCCCGGCTAT
CCGGACGCACGCAACATCTTCGAGAACCGCAACGCGCGGCTGCTGCCGCTGCCCGTCGACGGCAACGGCATCGCGCCCGA
CGAGCAGGATGCGGCGCTCGCACGCTGCGACTACGTGTACGTGACGCCGAGCCATCAGTGTCCGACCACCGCGACGATGC
CGGTCGAACGCCGCCGCGCGCTGCTCGAACGTGCGCGGCAGCACGACTTCGTGATCATCGAGGACGACTACGAGAGCGAG
AACACGTTCTCGGGCACGCCGCATCCGGCGCTGAAGAGCCTCGACACCGCCGATCGCGTGATCTACGTCGGCAGCCTGTC
GAAGACCTTCGCGCCGGGGCTGCGGCTCGGCTACGTGGTCGGTCCGCGCGCGCTGATCCGCGAGCTGCGCGCGTTGCGGC
GGCTGATGGTGCGCCATCCGGTCGCGTATATCCAGCGCGCGTTCGCGACGTTTCTCGCGCTCGGCCATCACGATGCGCTG
CTGCGCCGGCTCGCGCACGCGTACAGCGAGCGCTCGCAGGCGCTGATGTCCGCGCTCGACACGCATCTGCCGGACGCGCG
CTACGTGCGCGTGACGGGCGGCGCGTCGTGCTGGGTCGAAGGCCCGCCGTGGCTCGATGCGGTGCGCCTCGCGGCCGACG
CGCAGGCGGCCGGCATCCTGATCGAACCGGGCGACGTGTTCTTCATGAACGACGACGCCGATGCGCGCCGCTGTTTCCGG
ATGGGCTTCTCGGCGATTCCGCTGGAGCGGATCGATGCGGGGGTGCAGGCACTCGCGCAGTGCGTGAACGGCCAGCGTCC
GGCCCGATAA

Upstream 100 bases:

>100_bases
TCCACATCCGCGTCGCGGCGCGCGTATGCTCGCGATACCGCGCGCCCGCCGCGGGACCGCGCGATGCGCCGCGGTGTCCG
CCACGTTCGAAGGAGCAAGC

Downstream 100 bases:

>100_bases
GGCGCGCATGATGCGCGCATGATCCGCGCCGCACGCGCGCCGGGGCCGCGCGTGCACGCTGGCCCAAGCGAAACCCCCGA
ACTGGCGCTACCGTCAAAAA

Product: 2-aminoadipate transaminase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 509; Mature: 508

Protein sequence:

>509_residues
MSSRTPTALWAQQFRRSSTSKTSLQDQIRRMLVAAILDGQLPPDAALPSSRELADQLGVARNTVVLAYQMLVEEGYLISR
ERSGHFVNPKMLEGLPGFTPAPPEAKPDSDDDAGRPAWHERIAHPPSRQRNIVKPANWQHYEFPFIYGQFDQSLFPTNDW
RECCLKALSVMEIRNWAPDLIERDDESLIQQIRTRVLPRRGVFAMPDEIVVTNGCQQALYLIADLLCGKHTTVGFENPGY
PDARNIFENRNARLLPLPVDGNGIAPDEQDAALARCDYVYVTPSHQCPTTATMPVERRRALLERARQHDFVIIEDDYESE
NTFSGTPHPALKSLDTADRVIYVGSLSKTFAPGLRLGYVVGPRALIRELRALRRLMVRHPVAYIQRAFATFLALGHHDAL
LRRLAHAYSERSQALMSALDTHLPDARYVRVTGGASCWVEGPPWLDAVRLAADAQAAGILIEPGDVFFMNDDADARRCFR
MGFSAIPLERIDAGVQALAQCVNGQRPAR

Sequences:

>Translated_509_residues
MSSRTPTALWAQQFRRSSTSKTSLQDQIRRMLVAAILDGQLPPDAALPSSRELADQLGVARNTVVLAYQMLVEEGYLISR
ERSGHFVNPKMLEGLPGFTPAPPEAKPDSDDDAGRPAWHERIAHPPSRQRNIVKPANWQHYEFPFIYGQFDQSLFPTNDW
RECCLKALSVMEIRNWAPDLIERDDESLIQQIRTRVLPRRGVFAMPDEIVVTNGCQQALYLIADLLCGKHTTVGFENPGY
PDARNIFENRNARLLPLPVDGNGIAPDEQDAALARCDYVYVTPSHQCPTTATMPVERRRALLERARQHDFVIIEDDYESE
NTFSGTPHPALKSLDTADRVIYVGSLSKTFAPGLRLGYVVGPRALIRELRALRRLMVRHPVAYIQRAFATFLALGHHDAL
LRRLAHAYSERSQALMSALDTHLPDARYVRVTGGASCWVEGPPWLDAVRLAADAQAAGILIEPGDVFFMNDDADARRCFR
MGFSAIPLERIDAGVQALAQCVNGQRPAR
>Mature_508_residues
SSRTPTALWAQQFRRSSTSKTSLQDQIRRMLVAAILDGQLPPDAALPSSRELADQLGVARNTVVLAYQMLVEEGYLISRE
RSGHFVNPKMLEGLPGFTPAPPEAKPDSDDDAGRPAWHERIAHPPSRQRNIVKPANWQHYEFPFIYGQFDQSLFPTNDWR
ECCLKALSVMEIRNWAPDLIERDDESLIQQIRTRVLPRRGVFAMPDEIVVTNGCQQALYLIADLLCGKHTTVGFENPGYP
DARNIFENRNARLLPLPVDGNGIAPDEQDAALARCDYVYVTPSHQCPTTATMPVERRRALLERARQHDFVIIEDDYESEN
TFSGTPHPALKSLDTADRVIYVGSLSKTFAPGLRLGYVVGPRALIRELRALRRLMVRHPVAYIQRAFATFLALGHHDALL
RRLAHAYSERSQALMSALDTHLPDARYVRVTGGASCWVEGPPWLDAVRLAADAQAAGILIEPGDVFFMNDDADARRCFRM
GFSAIPLERIDAGVQALAQCVNGQRPAR

Specific function: Unknown

COG id: COG1167

COG function: function code KE; Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]

Homologues:

Organism=Homo sapiens, GI7705897, Length=313, Percent_Identity=26.1980830670927, Blast_Score=116, Evalue=4e-26,
Organism=Homo sapiens, GI33469970, Length=313, Percent_Identity=26.1980830670927, Blast_Score=116, Evalue=4e-26,
Organism=Escherichia coli, GI1787710, Length=493, Percent_Identity=28.1947261663286, Blast_Score=129, Evalue=5e-31,
Organism=Escherichia coli, GI1790797, Length=464, Percent_Identity=27.1551724137931, Blast_Score=125, Evalue=9e-30,
Organism=Saccharomyces cerevisiae, GI6321236, Length=254, Percent_Identity=22.8346456692913, Blast_Score=80, Evalue=5e-16,
Organism=Saccharomyces cerevisiae, GI6321000, Length=242, Percent_Identity=25.6198347107438, Blast_Score=74, Evalue=6e-14,
Organism=Saccharomyces cerevisiae, GI6321929, Length=233, Percent_Identity=23.175965665236, Blast_Score=71, Evalue=4e-13,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004839
- InterPro:   IPR000524
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00155 Aminotran_1_2; PF00392 GntR [H]

EC number: NA

Molecular weight: Translated: 56966; Mature: 56835

Theoretical pI: Translated: 6.98; Mature: 6.98

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSRTPTALWAQQFRRSSTSKTSLQDQIRRMLVAAILDGQLPPDAALPSSRELADQLGVA
CCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCH
RNTVVLAYQMLVEEGYLISRERSGHFVNPKMLEGLPGFTPAPPEAKPDSDDDAGRPAWHE
HHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHH
RIAHPPSRQRNIVKPANWQHYEFPFIYGQFDQSLFPTNDWRECCLKALSVMEIRNWAPDL
HHCCCCCCCCCCCCCCCCCCEECCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHH
IERDDESLIQQIRTRVLPRRGVFAMPDEIVVTNGCQQALYLIADLLCGKHTTVGFENPGY
HCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCC
PDARNIFENRNARLLPLPVDGNGIAPDEQDAALARCDYVYVTPSHQCPTTATMPVERRRA
CCHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHCCEEEECCCCCCCCCCCCCHHHHHH
LLERARQHDFVIIEDDYESENTFSGTPHPALKSLDTADRVIYVGSLSKTFAPGLRLGYVV
HHHHHHHCCEEEEECCCCCCCCCCCCCCHHHHHCCCCCCEEEEECCHHHHCCCCEEEEEE
GPRALIRELRALRRLMVRHPVAYIQRAFATFLALGHHDALLRRLAHAYSERSQALMSALD
CHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
THLPDARYVRVTGGASCWVEGPPWLDAVRLAADAQAAGILIEPGDVFFMNDDADARRCFR
HCCCCCEEEEEECCCEEEECCCCHHHHHHHHHCCCCCEEEECCCCEEEECCCHHHHHHHH
MGFSAIPLERIDAGVQALAQCVNGQRPAR
HCCCCCCHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SSRTPTALWAQQFRRSSTSKTSLQDQIRRMLVAAILDGQLPPDAALPSSRELADQLGVA
CCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCH
RNTVVLAYQMLVEEGYLISRERSGHFVNPKMLEGLPGFTPAPPEAKPDSDDDAGRPAWHE
HHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHH
RIAHPPSRQRNIVKPANWQHYEFPFIYGQFDQSLFPTNDWRECCLKALSVMEIRNWAPDL
HHCCCCCCCCCCCCCCCCCCEECCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHH
IERDDESLIQQIRTRVLPRRGVFAMPDEIVVTNGCQQALYLIADLLCGKHTTVGFENPGY
HCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCC
PDARNIFENRNARLLPLPVDGNGIAPDEQDAALARCDYVYVTPSHQCPTTATMPVERRRA
CCHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHCCEEEECCCCCCCCCCCCCHHHHHH
LLERARQHDFVIIEDDYESENTFSGTPHPALKSLDTADRVIYVGSLSKTFAPGLRLGYVV
HHHHHHHCCEEEEECCCCCCCCCCCCCCHHHHHCCCCCCEEEEECCHHHHCCCCEEEEEE
GPRALIRELRALRRLMVRHPVAYIQRAFATFLALGHHDALLRRLAHAYSERSQALMSALD
CHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
THLPDARYVRVTGGASCWVEGPPWLDAVRLAADAQAAGILIEPGDVFFMNDDADARRCFR
HCCCCCEEEEEECCCEEEECCCCHHHHHHHHHCCCCCEEEECCCCEEEECCCHHHHHHHH
MGFSAIPLERIDAGVQALAQCVNGQRPAR
HCCCCCCHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]