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The map label for this gene is 189352464

Identifier: 189352464

GI number: 189352464

Start: 512639

End: 513658

Strand: Reverse

Name: 189352464

Synonym: BMULJ_03683

Alternate gene names: NA

Gene position: 513658-512639 (Counterclockwise)

Preceding gene: 189352465

Following gene: 189352461

Centisome position: 20.77

GC content: 47.16

Gene sequence:

>1020_bases
ATGGCGAAATCTCAAACGACAAGAAAGCAGTACACGAAAAATAGATCTCCATTCTTTCGACTCGAATCTAGAAGGAAGTT
AGCGACCTTATTGGCGACAACCCTAAAGAGTCTTGAAGAACTGGCGGGGTTGCCGTCCAATCAGCGTTACAAGATGTTTT
TCGAGCAAGAATCGGGTCGATATATCACTGAGCCAATCGGCGAACTTAGACGGGTCCACAAACGCATCGCAAAGTTGCTG
TGCCGCGTCTCACCACCGGACTTTCTTCAGTCCGCCACAAAAGGCCGCTCATATAAAACCAATGCAGAAGCTCACATTGG
TGGCCAAAATATCATCAAGCTGGACATTAAAGAATATTATCCGTCCGTTACATTCGGTGCCATATATCATTTTTTCCTCA
ACAATCTTAAATGCTCACAAGATGTCGCGACACTTTTAACGAAAATTTGTACAGTTTCAGCATGCGGGCGGACTCATCTT
CCCACTGGCAGCAGTTTAAGTCCGATCCTTTCATACTGGGCATACAGCCATCTTTTTGACGAGATAAATTCGCTTTGCGC
CGCCAAAGGTTGCACTATGACCCTTTACATTGACGACATTACCGTCTCGGGTCCAAATGCTGACAAACTGCTTTTGGCGG
AAATAAGGAATAGAATTGATGCAACCGGTCTTGTTGCACACAAATTCAAAGCATCTCAAGGTATGCCCATAAAAGTAACG
GGCGTAATTGTGCTACGAGACGGCATCACACTTCCGCACGATAGGGCTCGGGACATACGGAAGCTACAAGCAGAATTGGC
CACTACCTCACCTGAGGAGGTAGATCCCACGTTATCGAAGCTGGTTGGCAAGTTGAATGAAGCTCAACAATTTGTCGCAA
CCTATGGCGAGATAAAGCGCGCTGTCTTGCGACAACATTCGAATGCGTGGAATCGAATCGTTACCGAGCGCGCGACCCAA
TCACGACGGGCAATGCTGAGACGTCGTCGCAAAACTGCTGTGAAGAAAGCATCGGGCTAA

Upstream 100 bases:

>100_bases
CTCGCATTCTCAGAGACATTGGACGGAAGTCAAAGCGTTAGCAAGGTAAAAAGCTTCGTCGCAAAGAAAATGCTAAAGGT
TCTCGAATGGATTTCCGAAA

Downstream 100 bases:

>100_bases
CCCGTCGCGCATGGAGGCGGAGGCGCTCGTCCGCCTTACTTCTCTGTCCGTAGCCGCATCCTCCCTGACATGGATAATGG
CGAGCCTGCATATTCAGAGC

Product: probable reverse transcriptase

Products: NA

Alternate protein names: EC86-RT; Reverse transcriptase [H]

Number of amino acids: Translated: 339; Mature: 338

Protein sequence:

>339_residues
MAKSQTTRKQYTKNRSPFFRLESRRKLATLLATTLKSLEELAGLPSNQRYKMFFEQESGRYITEPIGELRRVHKRIAKLL
CRVSPPDFLQSATKGRSYKTNAEAHIGGQNIIKLDIKEYYPSVTFGAIYHFFLNNLKCSQDVATLLTKICTVSACGRTHL
PTGSSLSPILSYWAYSHLFDEINSLCAAKGCTMTLYIDDITVSGPNADKLLLAEIRNRIDATGLVAHKFKASQGMPIKVT
GVIVLRDGITLPHDRARDIRKLQAELATTSPEEVDPTLSKLVGKLNEAQQFVATYGEIKRAVLRQHSNAWNRIVTERATQ
SRRAMLRRRRKTAVKKASG

Sequences:

>Translated_339_residues
MAKSQTTRKQYTKNRSPFFRLESRRKLATLLATTLKSLEELAGLPSNQRYKMFFEQESGRYITEPIGELRRVHKRIAKLL
CRVSPPDFLQSATKGRSYKTNAEAHIGGQNIIKLDIKEYYPSVTFGAIYHFFLNNLKCSQDVATLLTKICTVSACGRTHL
PTGSSLSPILSYWAYSHLFDEINSLCAAKGCTMTLYIDDITVSGPNADKLLLAEIRNRIDATGLVAHKFKASQGMPIKVT
GVIVLRDGITLPHDRARDIRKLQAELATTSPEEVDPTLSKLVGKLNEAQQFVATYGEIKRAVLRQHSNAWNRIVTERATQ
SRRAMLRRRRKTAVKKASG
>Mature_338_residues
AKSQTTRKQYTKNRSPFFRLESRRKLATLLATTLKSLEELAGLPSNQRYKMFFEQESGRYITEPIGELRRVHKRIAKLLC
RVSPPDFLQSATKGRSYKTNAEAHIGGQNIIKLDIKEYYPSVTFGAIYHFFLNNLKCSQDVATLLTKICTVSACGRTHLP
TGSSLSPILSYWAYSHLFDEINSLCAAKGCTMTLYIDDITVSGPNADKLLLAEIRNRIDATGLVAHKFKASQGMPIKVTG
VIVLRDGITLPHDRARDIRKLQAELATTSPEEVDPTLSKLVGKLNEAQQFVATYGEIKRAVLRQHSNAWNRIVTERATQS
RRAMLRRRRKTAVKKASG

Specific function: Participates in the synthesis of a msDNA (a branched RNA linked by a 2',5'-phosphodiester linkage to a single-stranded DNA) of unknown function. The retron transcript serves as primer and template to the reaction, and codes for the RT [H]

COG id: COG3344

COG function: function code L; Retron-type reverse transcriptase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 reverse transcriptase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000123
- InterPro:   IPR000477 [H]

Pfam domain/function: PF00078 RVT_1 [H]

EC number: =2.7.7.49 [H]

Molecular weight: Translated: 38116; Mature: 37984

Theoretical pI: Translated: 10.61; Mature: 10.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKSQTTRKQYTKNRSPFFRLESRRKLATLLATTLKSLEELAGLPSNQRYKMFFEQESGR
CCCCHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCC
YITEPIGELRRVHKRIAKLLCRVSPPDFLQSATKGRSYKTNAEAHIGGQNIIKLDIKEYY
CHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCEEECCCCEEEEEHHHHC
PSVTFGAIYHFFLNNLKCSQDVATLLTKICTVSACGRTHLPTGSSLSPILSYWAYSHLFD
CCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHH
EINSLCAAKGCTMTLYIDDITVSGPNADKLLLAEIRNRIDATGLVAHKFKASQGMPIKVT
HHHHHHHHCCCEEEEEEEEEEECCCCCCHHHHHHHHHHHCHHHHHHHHHHCCCCCCEEEE
GVIVLRDGITLPHDRARDIRKLQAELATTSPEEVDPTLSKLVGKLNEAQQFVATYGEIKR
EEEEEECCCCCCCHHHHHHHHHHHHHHCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
AVLRQHSNAWNRIVTERATQSRRAMLRRRRKTAVKKASG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
AKSQTTRKQYTKNRSPFFRLESRRKLATLLATTLKSLEELAGLPSNQRYKMFFEQESGR
CCCHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCC
YITEPIGELRRVHKRIAKLLCRVSPPDFLQSATKGRSYKTNAEAHIGGQNIIKLDIKEYY
CHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCEEECCCCEEEEEHHHHC
PSVTFGAIYHFFLNNLKCSQDVATLLTKICTVSACGRTHLPTGSSLSPILSYWAYSHLFD
CCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHH
EINSLCAAKGCTMTLYIDDITVSGPNADKLLLAEIRNRIDATGLVAHKFKASQGMPIKVT
HHHHHHHHCCCEEEEEEEEEEECCCCCCHHHHHHHHHHHCHHHHHHHHHHCCCCCCEEEE
GVIVLRDGITLPHDRARDIRKLQAELATTSPEEVDPTLSKLVGKLNEAQQFVATYGEIKR
EEEEEECCCCCCCHHHHHHHHHHHHHHCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
AVLRQHSNAWNRIVTERATQSRRAMLRRRRKTAVKKASG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2466573; 1722556 [H]