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The map label for this gene is yhdJ [H]

Identifier: 189352441

GI number: 189352441

Start: 494488

End: 495237

Strand: Reverse

Name: yhdJ [H]

Synonym: BMULJ_03660

Alternate gene names: 189352441

Gene position: 495237-494488 (Counterclockwise)

Preceding gene: 189352442

Following gene: 189352440

Centisome position: 20.02

GC content: 68.27

Gene sequence:

>750_bases
ATGCAACACCCCATCTCCGCTGACCTGATCAACCGCATTCACCTGGCCGACGCGACGAGCGTGCTGCGCGCGCTGCCCGA
CGGCTGTATCGACCTGACCTTCACGGATCCGCCCTACTCGTCCGGCGGCACGACGAGCGCGTCGCGCAGCCAGACGCCGT
CGAGCAAGTACATCGGCGGCGACGTGAAGACCGTCTACCCTGAGTTCCAGCACGACAGCAAGGATCAACGGTCGTGGACG
TTCTGGTGCATGACGTGGCTCGCCGAGGTCTACCGCGTCAGTCGCAACGAAGCACACCTCGTCTGCTTCGTCGACTGGCG
CCAGTTGCCGAGCCTCACCGATGCAATCCAGGCGGCCGGCTTCACGTGGCGCGGCGTCGCTGTGTGGGATAAGACGAATG
GCCGTACACGGCCGCGCGCCGGCGGCTTCGCGCAGCAGGCCGAATTCCTGGTCTGGGCGACGAAGGGCGCCGTGCGCCGC
GCTGACGTGTACCTGCCCGGCGTGTTCTCCGAACGCCTCGCGCACCCGAAGCGTCACATGACCGAAAAGCCCGCGCAGCT
CGCGCGCGAAGTCGTGCGCCTGGCGCCGGCCGGGGGCGTCGTCCTGGACCCGTTCACCGGATCCGGGACGTTCCTCGACG
CTGCGAAACAGGGCGGCTTGAACTGGATCGGCTGCGAGCTCGAGCCGGCCTACCATCAGGTCGCAACGGCGCGGCTGGCC
GGGCTCGACACTCTGGGCGTCGCGGCGTAG

Upstream 100 bases:

>100_bases
CTTACCATCAAATGCCCGCGCTGTCGGGCCATGAACGTCTTGAGGGCCGAGCGCCCCTTACCCGCAGGCCACCGAGCCTC
CGATACGAGGGAATCGCCCC

Downstream 100 bases:

>100_bases
CGACGTTTCGCGGCGGTTTCGGTTGTGCCCGGCCGCTGCACAACCAAGCGCGCGTGATCTGCGCGCGCGCGAGCGGCAAT
CTTTCGGGAGGCTCACTTCC

Product: putative adenine-specific DNA-methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 249; Mature: 249

Protein sequence:

>249_residues
MQHPISADLINRIHLADATSVLRALPDGCIDLTFTDPPYSSGGTTSASRSQTPSSKYIGGDVKTVYPEFQHDSKDQRSWT
FWCMTWLAEVYRVSRNEAHLVCFVDWRQLPSLTDAIQAAGFTWRGVAVWDKTNGRTRPRAGGFAQQAEFLVWATKGAVRR
ADVYLPGVFSERLAHPKRHMTEKPAQLAREVVRLAPAGGVVLDPFTGSGTFLDAAKQGGLNWIGCELEPAYHQVATARLA
GLDTLGVAA

Sequences:

>Translated_249_residues
MQHPISADLINRIHLADATSVLRALPDGCIDLTFTDPPYSSGGTTSASRSQTPSSKYIGGDVKTVYPEFQHDSKDQRSWT
FWCMTWLAEVYRVSRNEAHLVCFVDWRQLPSLTDAIQAAGFTWRGVAVWDKTNGRTRPRAGGFAQQAEFLVWATKGAVRR
ADVYLPGVFSERLAHPKRHMTEKPAQLAREVVRLAPAGGVVLDPFTGSGTFLDAAKQGGLNWIGCELEPAYHQVATARLA
GLDTLGVAA
>Mature_249_residues
MQHPISADLINRIHLADATSVLRALPDGCIDLTFTDPPYSSGGTTSASRSQTPSSKYIGGDVKTVYPEFQHDSKDQRSWT
FWCMTWLAEVYRVSRNEAHLVCFVDWRQLPSLTDAIQAAGFTWRGVAVWDKTNGRTRPRAGGFAQQAEFLVWATKGAVRR
ADVYLPGVFSERLAHPKRHMTEKPAQLAREVVRLAPAGGVVLDPFTGSGTFLDAAKQGGLNWIGCELEPAYHQVATARLA
GLDTLGVAA

Specific function: Unknown

COG id: COG0863

COG function: function code L; DNA modification methylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the N(4)/N(6)-methyltransferase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002941
- InterPro:   IPR002052
- InterPro:   IPR001091 [H]

Pfam domain/function: PF01555 N6_N4_Mtase [H]

EC number: NA

Molecular weight: Translated: 27285; Mature: 27285

Theoretical pI: Translated: 8.33; Mature: 8.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQHPISADLINRIHLADATSVLRALPDGCIDLTFTDPPYSSGGTTSASRSQTPSSKYIGG
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
DVKTVYPEFQHDSKDQRSWTFWCMTWLAEVYRVSRNEAHLVCFVDWRQLPSLTDAIQAAG
CCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHCCCHHHHHHHCC
FTWRGVAVWDKTNGRTRPRAGGFAQQAEFLVWATKGAVRRADVYLPGVFSERLAHPKRHM
CEEEEEEEEECCCCCCCCCCCCCHHHCCEEEEECCCCEEECEEECCCHHHHHHCCCHHHH
TEKPAQLAREVVRLAPAGGVVLDPFTGSGTFLDAAKQGGLNWIGCELEPAYHQVATARLA
CCCHHHHHHHHHHHCCCCCEEECCCCCCCCEEHHHHHCCCEEEEEECCHHHHHHHHHHHH
GLDTLGVAA
CCCHHCCCC
>Mature Secondary Structure
MQHPISADLINRIHLADATSVLRALPDGCIDLTFTDPPYSSGGTTSASRSQTPSSKYIGG
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
DVKTVYPEFQHDSKDQRSWTFWCMTWLAEVYRVSRNEAHLVCFVDWRQLPSLTDAIQAAG
CCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHCCCHHHHHHHCC
FTWRGVAVWDKTNGRTRPRAGGFAQQAEFLVWATKGAVRRADVYLPGVFSERLAHPKRHM
CEEEEEEEEECCCCCCCCCCCCCHHHCCEEEEECCCCEEECEEECCCHHHHHHCCCHHHH
TEKPAQLAREVVRLAPAGGVVLDPFTGSGTFLDAAKQGGLNWIGCELEPAYHQVATARLA
CCCHHHHHHHHHHHCCCCCEEECCCCCCCCEEHHHHHCCCEEEEEECCHHHHHHHHHHHH
GLDTLGVAA
CCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10366527 [H]