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The map label for this gene is yhdT [H]

Identifier: 189352402

GI number: 189352402

Start: 460037

End: 461380

Strand: Reverse

Name: yhdT [H]

Synonym: BMULJ_03621

Alternate gene names: 189352402

Gene position: 461380-460037 (Counterclockwise)

Preceding gene: 189352403

Following gene: 189352401

Centisome position: 18.66

GC content: 67.11

Gene sequence:

>1344_bases
TTGTTACAGATCTTCGCGCTGATCGGCGCGTTGTTCCTGGTAGCCCTCAACGGCTTTTTCGTCGCGGCCGAATTCGGCCT
CGTCAAACTACGCGCGACGCGCGTCAAGACGCTCGCGCGCAAGCACGGCCTGCGCGGCCGCATCCTCGGCGTCGTGCACG
GTCGCCTCGATGCGTATCTGTCCGCCTGCCAGCTCGGCATCACGCTCGCCTCGCTCGGCCTCGGCTGGATCGGCGAACCG
GCGTTCGCGCAGCTCATCGGCCCGCTGCTCGACGTGCTGGGCGTCCATTCCGAGCGCGTCGTGCACCTGATCTCGCTCGT
GTTCGCGTTCTCGCTGATCTCGTTCCTGCACATCGTCGTCGGCGAACTCGCGCCGAAGTCGATGGCGATCCGCCAGGCCG
AAAAGGTCGGACTGTGGGTCGCGCTGCCGCTCTACGCGTTCTACTGGGCGATGTATCCGGCGATCTGGCTGCTCAACACC
AGTGCGAACGCGGTGCTGCGGCTGGCCGGCCTGTCGGCCGATCACGGCGGCGATGCGCATTACTCGACCGACGAGCTGAA
GCTGATCCTGCGCAGCCGCCGCAGCACGGCCGGCAATACCGCGCCACCCGGGCGCGGCGCGTACAGCAACGACGAGTGGA
ATACGCTCGCGCACTCGCTCGATTTCTCGTCGATGACGGTGTCCGACCTGATGCGGCCCGCACACGAGATGATCGGCCTG
CGCCGCGATCTGCCGCTGCCCGACAACATGGAGATCGTCGCGCGGCACCGCTTCAGCCGCTATCCGCTGTTCACCGACGC
GTCGCGCGAACGCGTGTCGGGGCTGATCCATCTGAAGGACCTGCTGCTCGCGCGACATGCGGGCGCGGCGCTCGACGATC
TGTCCGACTATGTGCGGCCGGTTCAGTACGTGCAGCCCGACATGCCCGCGCTCGATCTGTTCCGCCGCTTCCGCAAGGGC
GCGCCGCACTTCGCGCTGGTCGGCAACAAGGGCGAGAAGCCGATCGGCTTTCTGACGCTCGACAACCTGCTCGGCGCGCT
CGTCGGCCAGATCCACGACGAGTTCCGTCAGGGCGATGCGGACTGGACGCGCCTCGACGACGGCACGCTGATGGGCAAAG
GCAGCCTGCCCGTCGTGTCGCTCGAGCAGGCGCTCGGCATCGACATCGACGAAGGGCGCGCGGAGTCGGTCGGCGGTCTC
GTGATCCAGGCGCTGAACGATCTGCCGTCGGAAGGGCAGCGCGTGTCGTTCGACCGCTTCGACGTCGTCGTGAAGAAGAT
GAACGGGCCGCGCATCGTGCTCGTGCGCGTGTATCCGAAGGTCGCGAAGGAGGCCGACGAGTGA

Upstream 100 bases:

>100_bases
GCGCGCCGGCACGCCGGCCTGAGCGAAGCGGCGCGCCCGACACATTACGCTTGCCTTTCAGGCTCTATACTGACGGGCCT
GACACAACCGGAGCGATTCC

Downstream 100 bases:

>100_bases
CGGCCTCGCAGCGCCGCGTGCCATGAAGCCCGCGCTGCCGCGCCGCTACGTCATCACGCCGGAGCCGGCTTCCGCATCGG
CGGCCGATTGCGATGCGTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 447; Mature: 447

Protein sequence:

>447_residues
MLQIFALIGALFLVALNGFFVAAEFGLVKLRATRVKTLARKHGLRGRILGVVHGRLDAYLSACQLGITLASLGLGWIGEP
AFAQLIGPLLDVLGVHSERVVHLISLVFAFSLISFLHIVVGELAPKSMAIRQAEKVGLWVALPLYAFYWAMYPAIWLLNT
SANAVLRLAGLSADHGGDAHYSTDELKLILRSRRSTAGNTAPPGRGAYSNDEWNTLAHSLDFSSMTVSDLMRPAHEMIGL
RRDLPLPDNMEIVARHRFSRYPLFTDASRERVSGLIHLKDLLLARHAGAALDDLSDYVRPVQYVQPDMPALDLFRRFRKG
APHFALVGNKGEKPIGFLTLDNLLGALVGQIHDEFRQGDADWTRLDDGTLMGKGSLPVVSLEQALGIDIDEGRAESVGGL
VIQALNDLPSEGQRVSFDRFDVVVKKMNGPRIVLVRVYPKVAKEADE

Sequences:

>Translated_447_residues
MLQIFALIGALFLVALNGFFVAAEFGLVKLRATRVKTLARKHGLRGRILGVVHGRLDAYLSACQLGITLASLGLGWIGEP
AFAQLIGPLLDVLGVHSERVVHLISLVFAFSLISFLHIVVGELAPKSMAIRQAEKVGLWVALPLYAFYWAMYPAIWLLNT
SANAVLRLAGLSADHGGDAHYSTDELKLILRSRRSTAGNTAPPGRGAYSNDEWNTLAHSLDFSSMTVSDLMRPAHEMIGL
RRDLPLPDNMEIVARHRFSRYPLFTDASRERVSGLIHLKDLLLARHAGAALDDLSDYVRPVQYVQPDMPALDLFRRFRKG
APHFALVGNKGEKPIGFLTLDNLLGALVGQIHDEFRQGDADWTRLDDGTLMGKGSLPVVSLEQALGIDIDEGRAESVGGL
VIQALNDLPSEGQRVSFDRFDVVVKKMNGPRIVLVRVYPKVAKEADE
>Mature_447_residues
MLQIFALIGALFLVALNGFFVAAEFGLVKLRATRVKTLARKHGLRGRILGVVHGRLDAYLSACQLGITLASLGLGWIGEP
AFAQLIGPLLDVLGVHSERVVHLISLVFAFSLISFLHIVVGELAPKSMAIRQAEKVGLWVALPLYAFYWAMYPAIWLLNT
SANAVLRLAGLSADHGGDAHYSTDELKLILRSRRSTAGNTAPPGRGAYSNDEWNTLAHSLDFSSMTVSDLMRPAHEMIGL
RRDLPLPDNMEIVARHRFSRYPLFTDASRERVSGLIHLKDLLLARHAGAALDDLSDYVRPVQYVQPDMPALDLFRRFRKG
APHFALVGNKGEKPIGFLTLDNLLGALVGQIHDEFRQGDADWTRLDDGTLMGKGSLPVVSLEQALGIDIDEGRAESVGGL
VIQALNDLPSEGQRVSFDRFDVVVKKMNGPRIVLVRVYPKVAKEADE

Specific function: Unknown

COG id: COG1253

COG function: function code R; Hemolysins and related proteins containing CBS domains

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

Organism=Homo sapiens, GI310128564, Length=396, Percent_Identity=33.3333333333333, Blast_Score=235, Evalue=6e-62,
Organism=Escherichia coli, GI145693175, Length=431, Percent_Identity=21.3457076566125, Blast_Score=101, Evalue=1e-22,
Organism=Escherichia coli, GI1790664, Length=435, Percent_Identity=23.2183908045977, Blast_Score=97, Evalue=2e-21,
Organism=Escherichia coli, GI87082033, Length=239, Percent_Identity=22.5941422594142, Blast_Score=74, Evalue=3e-14,
Organism=Escherichia coli, GI1786879, Length=237, Percent_Identity=25.3164556962025, Blast_Score=71, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016169
- InterPro:   IPR000644
- InterPro:   IPR002550
- InterPro:   IPR005170 [H]

Pfam domain/function: PF00571 CBS; PF03471 CorC_HlyC; PF01595 DUF21 [H]

EC number: NA

Molecular weight: Translated: 49049; Mature: 49049

Theoretical pI: Translated: 8.44; Mature: 8.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLQIFALIGALFLVALNGFFVAAEFGLVKLRATRVKTLARKHGLRGRILGVVHGRLDAYL
CHHHHHHHHHHHHHHHCCHHEEEHHCHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHH
SACQLGITLASLGLGWIGEPAFAQLIGPLLDVLGVHSERVVHLISLVFAFSLISFLHIVV
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
GELAPKSMAIRQAEKVGLWVALPLYAFYWAMYPAIWLLNTSANAVLRLAGLSADHGGDAH
HHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHEEEECCCCCEEEEECCCCCCCCCCC
YSTDELKLILRSRRSTAGNTAPPGRGAYSNDEWNTLAHSLDFSSMTVSDLMRPAHEMIGL
CCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHH
RRDLPLPDNMEIVARHRFSRYPLFTDASRERVSGLIHLKDLLLARHAGAALDDLSDYVRP
HCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
VQYVQPDMPALDLFRRFRKGAPHFALVGNKGEKPIGFLTLDNLLGALVGQIHDEFRQGDA
HHHCCCCCCHHHHHHHHHCCCCCEEEECCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCC
DWTRLDDGTLMGKGSLPVVSLEQALGIDIDEGRAESVGGLVIQALNDLPSEGQRVSFDRF
CCEECCCCEEECCCCCCCEEHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCEECHHHH
DVVVKKMNGPRIVLVRVYPKVAKEADE
HHHHHCCCCCEEEEEEECHHHHCCCCC
>Mature Secondary Structure
MLQIFALIGALFLVALNGFFVAAEFGLVKLRATRVKTLARKHGLRGRILGVVHGRLDAYL
CHHHHHHHHHHHHHHHCCHHEEEHHCHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHH
SACQLGITLASLGLGWIGEPAFAQLIGPLLDVLGVHSERVVHLISLVFAFSLISFLHIVV
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
GELAPKSMAIRQAEKVGLWVALPLYAFYWAMYPAIWLLNTSANAVLRLAGLSADHGGDAH
HHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHEEEECCCCCEEEEECCCCCCCCCCC
YSTDELKLILRSRRSTAGNTAPPGRGAYSNDEWNTLAHSLDFSSMTVSDLMRPAHEMIGL
CCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHH
RRDLPLPDNMEIVARHRFSRYPLFTDASRERVSGLIHLKDLLLARHAGAALDDLSDYVRP
HCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
VQYVQPDMPALDLFRRFRKGAPHFALVGNKGEKPIGFLTLDNLLGALVGQIHDEFRQGDA
HHHCCCCCCHHHHHHHHHCCCCCEEEECCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCC
DWTRLDDGTLMGKGSLPVVSLEQALGIDIDEGRAESVGGLVIQALNDLPSEGQRVSFDRF
CCEECCCCEEECCCCCCCEEHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCEECHHHH
DVVVKKMNGPRIVLVRVYPKVAKEADE
HHHHHCCCCCEEEEEEECHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377 [H]