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The map label for this gene is cmpR [H]

Identifier: 189352309

GI number: 189352309

Start: 358159

End: 359073

Strand: Reverse

Name: cmpR [H]

Synonym: BMULJ_03528

Alternate gene names: 189352309

Gene position: 359073-358159 (Counterclockwise)

Preceding gene: 189352314

Following gene: 189352308

Centisome position: 14.52

GC content: 66.89

Gene sequence:

>915_bases
ATGTCGACCAGCAGCCTGACCGAAAGCCGGATCGCGTACTTCTTCGAGGCGGTGCGCTGCGGCGCGATCCGCGCGGCGGC
CGACTGGCTCGACGTCGCGCCGTCCGCGGTGAGCCGCCAGATCGCGCTGCTCGAAGCGGAACTCGATGCCCCGCTGATCG
AACGCCACGCACGCGGCGTCACGCCGACGGAAGCGGGCCGGTTCGTGATCCAGTACTACCGCGAGCAGCGCGCGCATCGC
GACGATCTGCTGTCGCGGCTGCAGGATCTGCGCGGGCTGCGCACCGGGCACGTGCGCGTCGTGCTCGGCGAAGGCTTCGT
GTCGGACCTGCTGTCCGGGCCGATGCAGCAGTTCTGCACGCAGTACCCGAAGATTCGCGTCAATCTCGATCTCGGCAGTA
CGAACGACGTAATGACGAAAATCGCCGAGGACGACGGCGAAATCGGCCTCGTCTACAACCCGCCGCGCGAGCCGCGCATC
GTCTCGCGCGCGGCGCACCGGCAGCCGATGATGGCGATCGTCGGCGCCCGGATGGCGCGCACGATCCGGCGCAAGAGCCT
GACCGTGCAGGAGCTCGCGGCGTACCCGCTCGCCGCCACGCATCCGTCGTACGGCACCCGGCAGATGCTGCAGGCCGTCG
AATTCGCGGAAAAGATCAGCCTCGAACCGGCGATCACGACAAACTCGATCAACATCATGAAGCAGTTCGCGCGCTCGGAA
CTCGGCATCGTCGTGCTGCCCGCGTTCGCCGTCGCGAGCGAACTGAAAGCCGGCGAACTGAAGGCGATTCCGATCGAACA
CCCGATTCTGCAGAACGCCGAAGCGCATCTCGTCACGCGCGTCGGCCGCACGCTGTCGGTCGCGTCGAACCGCATGCTGC
AGATGATGTCGTCGCAGATGAGCGCGTTTCGCTAG

Upstream 100 bases:

>100_bases
CGCCGGTTCCGCTGCCGTTGTCGACGATCTTCGGCCCGTTTGACCCGTTCAACCAATAAGTGCCAATATTGAGATTGTTC
TATTTATTCGAACGCTCGCC

Downstream 100 bases:

>100_bases
CGCGCAGGCGTCGACGCCGCGCTCGCGCGCGGTCCGCGAAAAAACGCATAATGCGTTGCGATCTGCGGCGAATGTTGTGC
GACGCATCACAGCGGATGCG

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 304; Mature: 303

Protein sequence:

>304_residues
MSTSSLTESRIAYFFEAVRCGAIRAAADWLDVAPSAVSRQIALLEAELDAPLIERHARGVTPTEAGRFVIQYYREQRAHR
DDLLSRLQDLRGLRTGHVRVVLGEGFVSDLLSGPMQQFCTQYPKIRVNLDLGSTNDVMTKIAEDDGEIGLVYNPPREPRI
VSRAAHRQPMMAIVGARMARTIRRKSLTVQELAAYPLAATHPSYGTRQMLQAVEFAEKISLEPAITTNSINIMKQFARSE
LGIVVLPAFAVASELKAGELKAIPIEHPILQNAEAHLVTRVGRTLSVASNRMLQMMSSQMSAFR

Sequences:

>Translated_304_residues
MSTSSLTESRIAYFFEAVRCGAIRAAADWLDVAPSAVSRQIALLEAELDAPLIERHARGVTPTEAGRFVIQYYREQRAHR
DDLLSRLQDLRGLRTGHVRVVLGEGFVSDLLSGPMQQFCTQYPKIRVNLDLGSTNDVMTKIAEDDGEIGLVYNPPREPRI
VSRAAHRQPMMAIVGARMARTIRRKSLTVQELAAYPLAATHPSYGTRQMLQAVEFAEKISLEPAITTNSINIMKQFARSE
LGIVVLPAFAVASELKAGELKAIPIEHPILQNAEAHLVTRVGRTLSVASNRMLQMMSSQMSAFR
>Mature_303_residues
STSSLTESRIAYFFEAVRCGAIRAAADWLDVAPSAVSRQIALLEAELDAPLIERHARGVTPTEAGRFVIQYYREQRAHRD
DLLSRLQDLRGLRTGHVRVVLGEGFVSDLLSGPMQQFCTQYPKIRVNLDLGSTNDVMTKIAEDDGEIGLVYNPPREPRIV
SRAAHRQPMMAIVGARMARTIRRKSLTVQELAAYPLAATHPSYGTRQMLQAVEFAEKISLEPAITTNSINIMKQFARSEL
GIVVLPAFAVASELKAGELKAIPIEHPILQNAEAHLVTRVGRTLSVASNRMLQMMSSQMSAFR

Specific function: Activates transcription of the cmpABCD operon under carbon dioxide-limited conditions. Specifically binds to the cmpR- cmpA intergenic region [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI157672245, Length=287, Percent_Identity=25.4355400696864, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI87082132, Length=294, Percent_Identity=23.8095238095238, Blast_Score=68, Evalue=6e-13,
Organism=Escherichia coli, GI1788481, Length=268, Percent_Identity=23.134328358209, Blast_Score=68, Evalue=8e-13,
Organism=Escherichia coli, GI145693105, Length=277, Percent_Identity=23.4657039711191, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1788297, Length=144, Percent_Identity=27.0833333333333, Blast_Score=62, Evalue=5e-11,
Organism=Escherichia coli, GI87081978, Length=281, Percent_Identity=24.1992882562278, Blast_Score=61, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 33666; Mature: 33535

Theoretical pI: Translated: 9.62; Mature: 9.62

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTSSLTESRIAYFFEAVRCGAIRAAADWLDVAPSAVSRQIALLEAELDAPLIERHARGV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCHHHHHHCCCC
TPTEAGRFVIQYYREQRAHRDDLLSRLQDLRGLRTGHVRVVLGEGFVSDLLSGPMQQFCT
CCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHH
QYPKIRVNLDLGSTNDVMTKIAEDDGEIGLVYNPPREPRIVSRAAHRQPMMAIVGARMAR
HCCEEEEEEECCCCHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHCCHHHHHHHHHHHH
TIRRKSLTVQELAAYPLAATHPSYGTRQMLQAVEFAEKISLEPAITTNSINIMKQFARSE
HHHHHCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEECCHHHHHHHHHHHC
LGIVVLPAFAVASELKAGELKAIPIEHPILQNAEAHLVTRVGRTLSVASNRMLQMMSSQM
CCEEEEHHHHHHHHCCCCCEEECCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
SAFR
HHCC
>Mature Secondary Structure 
STSSLTESRIAYFFEAVRCGAIRAAADWLDVAPSAVSRQIALLEAELDAPLIERHARGV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCHHHHHHCCCC
TPTEAGRFVIQYYREQRAHRDDLLSRLQDLRGLRTGHVRVVLGEGFVSDLLSGPMQQFCT
CCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHH
QYPKIRVNLDLGSTNDVMTKIAEDDGEIGLVYNPPREPRIVSRAAHRQPMMAIVGARMAR
HCCEEEEEEECCCCHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHCCHHHHHHHHHHHH
TIRRKSLTVQELAAYPLAATHPSYGTRQMLQAVEFAEKISLEPAITTNSINIMKQFARSE
HHHHHCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEECCHHHHHHHHHHHC
LGIVVLPAFAVASELKAGELKAIPIEHPILQNAEAHLVTRVGRTLSVASNRMLQMMSSQM
CCEEEEHHHHHHHHCCCCCEEECCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
SAFR
HHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]