| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189184832
Identifier: 189184832
GI number: 189184832
Start: 1958389
End: 1959453
Strand: Direct
Name: 189184832
Synonym: OTT_1925
Alternate gene names: NA
Gene position: 1958389-1959453 (Clockwise)
Preceding gene: 189184829
Following gene: 189184835
Centisome position: 97.48
GC content: 29.11
Gene sequence:
>1065_bases ATGAATATTATAAATATTATAAACAGTATTGCTGAGAGTGGTAAATATTGTATAGTTGCTATACCTAAAGAATTATCAGG AGTAGCAAAGCTACTAGGAATTAAGGCATATGAGATTTGTAATTTTACATTTCTTCGTCCATATGGATACAATACTTATA GTAAGAATATATATGAGCTTAAAGGATGTGATAAAAACTTAAAGCTAAGTTTGTCTAATAATCATACTGAAGTGTTATTT AGTATTACTGAGCATTGCATTTCAACTCTAAAAATGACATTACCAGACAACATAGACGATGATACAAATATAAAGTTTTT TAAAGTAGTAAATGACTTATCTTTATCTAATATTGAACAAATAACTAGTACAGGCTGTAAAGTAGTAAATTGTACTAAGG AGTATTTAATAGAAGCTTATTATGGCATGTATAACTCAACAATTGAAGGAAATACTAGTGCAATTTGTAATACCAGCATT ATTACTAGTAGTAATCAATACAATAGTAGTCAGTACAAAGAAAATAACTACTGGCTACCATCGTACACAAATTATGTGCT ACTTGCTATAGGAACAGTAGCTGCAGCTATTCCTACAGTTATAGCATGCTATCTCAAGCATAAAAACAGTGGTTTAGAAG CTCTCAATCGTGATCTAACTAATAAGCTAAATCATGAATATGATGAGTTGCCGAATTCTAATTTATCTAATAATCAGATT TATGATGAACCATTAGCTTCTACTTCTTCTTATCAGACTAATATATCATTGATTCATCCTATATATGCTATAATTCAAAA GAAAAACAAACTTTCTGATAATCAGATAGGCAGTATTAACAGTAAAAGTACTAACTTTACTACTGCTCTTGCTACCTTTG TTGAGAGTAATGATAGCGATAACACATATGATGATGTTGCATATGATCAAGAAGGAAGTAGTAACAGCAACAGTTATTCT AATCAAGAAAAAAATGATGAAACCTTTGAGTTACAAAAAAATCCTATTTATAATGAAGAAAATAACTATTTACTTGGAAT TACTCTAGATCAAACTTACAGCTGA
Upstream 100 bases:
>100_bases TCGTTTCTCAGAAGGTTTATTCTTGAATTTATTTGTATATATTGACAATGAAAGTAAATCATTCTATAAGCTTATGCTTA TAATAATAAGGTGATTATTT
Downstream 100 bases:
>100_bases TAGTTAAACTAGTATATTTTTTTCACTAACTTTTTTTAATTTCTTATTATGTAACTAGTGCTAAAACATGTAGCGGTATA AATATTTGCTATTTTTACCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 354; Mature: 354
Protein sequence:
>354_residues MNIINIINSIAESGKYCIVAIPKELSGVAKLLGIKAYEICNFTFLRPYGYNTYSKNIYELKGCDKNLKLSLSNNHTEVLF SITEHCISTLKMTLPDNIDDDTNIKFFKVVNDLSLSNIEQITSTGCKVVNCTKEYLIEAYYGMYNSTIEGNTSAICNTSI ITSSNQYNSSQYKENNYWLPSYTNYVLLAIGTVAAAIPTVIACYLKHKNSGLEALNRDLTNKLNHEYDELPNSNLSNNQI YDEPLASTSSYQTNISLIHPIYAIIQKKNKLSDNQIGSINSKSTNFTTALATFVESNDSDNTYDDVAYDQEGSSNSNSYS NQEKNDETFELQKNPIYNEENNYLLGITLDQTYS
Sequences:
>Translated_354_residues MNIINIINSIAESGKYCIVAIPKELSGVAKLLGIKAYEICNFTFLRPYGYNTYSKNIYELKGCDKNLKLSLSNNHTEVLF SITEHCISTLKMTLPDNIDDDTNIKFFKVVNDLSLSNIEQITSTGCKVVNCTKEYLIEAYYGMYNSTIEGNTSAICNTSI ITSSNQYNSSQYKENNYWLPSYTNYVLLAIGTVAAAIPTVIACYLKHKNSGLEALNRDLTNKLNHEYDELPNSNLSNNQI YDEPLASTSSYQTNISLIHPIYAIIQKKNKLSDNQIGSINSKSTNFTTALATFVESNDSDNTYDDVAYDQEGSSNSNSYS NQEKNDETFELQKNPIYNEENNYLLGITLDQTYS >Mature_354_residues MNIINIINSIAESGKYCIVAIPKELSGVAKLLGIKAYEICNFTFLRPYGYNTYSKNIYELKGCDKNLKLSLSNNHTEVLF SITEHCISTLKMTLPDNIDDDTNIKFFKVVNDLSLSNIEQITSTGCKVVNCTKEYLIEAYYGMYNSTIEGNTSAICNTSI ITSSNQYNSSQYKENNYWLPSYTNYVLLAIGTVAAAIPTVIACYLKHKNSGLEALNRDLTNKLNHEYDELPNSNLSNNQI YDEPLASTSSYQTNISLIHPIYAIIQKKNKLSDNQIGSINSKSTNFTTALATFVESNDSDNTYDDVAYDQEGSSNSNSYS NQEKNDETFELQKNPIYNEENNYLLGITLDQTYS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39753; Mature: 39753
Theoretical pI: Translated: 4.54; Mature: 4.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIINIINSIAESGKYCIVAIPKELSGVAKLLGIKAYEICNFTFLRPYGYNTYSKNIYEL CHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCHHHHEECEEEECCCCCCCCCCCEEEE KGCDKNLKLSLSNNHTEVLFSITEHCISTLKMTLPDNIDDDTNIKFFKVVNDLSLSNIEQ CCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCHHHHHH ITSTGCKVVNCTKEYLIEAYYGMYNSTIEGNTSAICNTSIITSSNQYNSSQYKENNYWLP HHHCCCEEEEHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCEECC SYTNYVLLAIGTVAAAIPTVIACYLKHKNSGLEALNRDLTNKLNHEYDELPNSNLSNNQI CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHCCCCCCCCCCC YDEPLASTSSYQTNISLIHPIYAIIQKKNKLSDNQIGSINSKSTNFTTALATFVESNDSD CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCC NTYDDVAYDQEGSSNSNSYSNQEKNDETFELQKNPIYNEENNYLLGITLDQTYS CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEEEEEECCCCC >Mature Secondary Structure MNIINIINSIAESGKYCIVAIPKELSGVAKLLGIKAYEICNFTFLRPYGYNTYSKNIYEL CHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCHHHHEECEEEECCCCCCCCCCCEEEE KGCDKNLKLSLSNNHTEVLFSITEHCISTLKMTLPDNIDDDTNIKFFKVVNDLSLSNIEQ CCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCHHHHHH ITSTGCKVVNCTKEYLIEAYYGMYNSTIEGNTSAICNTSIITSSNQYNSSQYKENNYWLP HHHCCCEEEEHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCEECC SYTNYVLLAIGTVAAAIPTVIACYLKHKNSGLEALNRDLTNKLNHEYDELPNSNLSNNQI CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHCCCCCCCCCCC YDEPLASTSSYQTNISLIHPIYAIIQKKNKLSDNQIGSINSKSTNFTTALATFVESNDSD CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCC NTYDDVAYDQEGSSNSNSYSNQEKNDETFELQKNPIYNEENNYLLGITLDQTYS CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA