Definition Orientia tsutsugamushi str. Ikeda, complete genome.
Accession NC_010793
Length 2,008,987

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The map label for this gene is 189184803

Identifier: 189184803

GI number: 189184803

Start: 1934783

End: 1934944

Strand: Direct

Name: 189184803

Synonym: OTT_1896

Alternate gene names: NA

Gene position: 1934783-1934944 (Clockwise)

Preceding gene: 189184802

Following gene: 189184804

Centisome position: 96.31

GC content: 26.54

Gene sequence:

>162_bases
ATGGTAGGAGATAGAATCGTATTTCAAAAAAGCAATAAGGATTTACAAATACAAAACAGTGAATTTGCAACTTTAACTTC
TGTTAATAAAAATGAATTTGTAGCTAAGACAGATAACGATAGTAGTAAACAAATTTTTAGAAAACCATACAGGAATTTAT
AG

Upstream 100 bases:

>100_bases
ATTCTTAATTCAAGTATTAGGTCTTTGTTAAAAGCAAATGGTACGCTACAAGGCAAAGAATATAGGTGTTCATCAATAGC
TGGAAAAAAAAGAGTCCTAT

Downstream 100 bases:

>100_bases
TTCAAAAATCTTTAATAATCCTAATTTAAGGGCAAATATGGTTTTTGATGAAGAGACTCAAAAATCCTGGCCTGCACTCA
CTATTTTTGTTAAAAATGAA

Product: putative conjugative transfer protein TraA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 53; Mature: 53

Protein sequence:

>53_residues
MVGDRIVFQKSNKDLQIQNSEFATLTSVNKNEFVAKTDNDSSKQIFRKPYRNL

Sequences:

>Translated_53_residues
MVGDRIVFQKSNKDLQIQNSEFATLTSVNKNEFVAKTDNDSSKQIFRKPYRNL
>Mature_53_residues
MVGDRIVFQKSNKDLQIQNSEFATLTSVNKNEFVAKTDNDSSKQIFRKPYRNL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 6165; Mature: 6165

Theoretical pI: Translated: 10.28; Mature: 10.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVGDRIVFQKSNKDLQIQNSEFATLTSVNKNEFVAKTDNDSSKQIFRKPYRNL
CCCCEEEEEECCCCEEEECCCEEEEEECCCCCEEEECCCCCHHHHHHCCCCCC
>Mature Secondary Structure
MVGDRIVFQKSNKDLQIQNSEFATLTSVNKNEFVAKTDNDSSKQIFRKPYRNL
CCCCEEEEEECCCCEEEECCCEEEEEECCCCCEEEECCCCCHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA