Definition Orientia tsutsugamushi str. Ikeda, complete genome.
Accession NC_010793
Length 2,008,987

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The map label for this gene is 189184776

Identifier: 189184776

GI number: 189184776

Start: 1908088

End: 1908570

Strand: Direct

Name: 189184776

Synonym: OTT_1869

Alternate gene names: NA

Gene position: 1908088-1908570 (Clockwise)

Preceding gene: 189184775

Following gene: 189184788

Centisome position: 94.98

GC content: 28.36

Gene sequence:

>483_bases
TTGTTCTTATGCTTTGAGCTTCATCTTATAATCAATAATAAAGGCGAAATAATGTCAGTTAAAATTACTAAAGGCAATAA
AAGAGACCTATCTGTATCTTCAGTTTTTTCTAAAGGCTTATCTGGTAAATTGTTTAGTGATAAAGCTTACATATCTAAAG
AGTTATTTCATCAACTCTTCTCCAATGGTCTACGTTTATTTACTAATCTTCGTAAAGATATGAAAACATATTTATTGGAC
ATACAAGATAATCGGTTATTAAATAAACGTTCTTTAATTGAGTCTGTCTTTAATGTACTAAAAAAACATATGCATTTAGA
GCATACTAGACACCCTTCTCCTCTTAATTTCTTTGTTCATATAATTGCTTCTCTTGCTAGTTATTCTATCTCTAAACTTT
TAATTCCTATCTTCTCTTCTTTTCCCTACTCTGCCTTACCATATTCTGGCATTATTAAACTTGGTTATATAGAAATAAAT
TAA

Upstream 100 bases:

>100_bases
TTACATCGATTCTACAAAGTTAGCAATTTGTCATAATAAACGTACCCCCAGCAATAGAGTTTTTAACAAAATTTCTAAAA
TTGGTAAAAGTAGTTATGAC

Downstream 100 bases:

>100_bases
AATTTACTTTGGATTACCTGGAATAATTCCTTTTATCTGAGAGTTCCACAGCTCAGTGTAAACTTTGCCTGTTTTTAAAA
GAGTATCATGTGTGCCAGTT

Product: transposase

Products: NA

Alternate protein names: Transposase IS4 Family Protein; ISPg3 Transposase; Transposase IS4 Family; Transposase And Inactivated Derivative; IS4 Family Transposase; Membrane-Associated Metal-Dependent Hydrolase; Transposase IS

Number of amino acids: Translated: 160; Mature: 160

Protein sequence:

>160_residues
MFLCFELHLIINNKGEIMSVKITKGNKRDLSVSSVFSKGLSGKLFSDKAYISKELFHQLFSNGLRLFTNLRKDMKTYLLD
IQDNRLLNKRSLIESVFNVLKKHMHLEHTRHPSPLNFFVHIIASLASYSISKLLIPIFSSFPYSALPYSGIIKLGYIEIN

Sequences:

>Translated_160_residues
MFLCFELHLIINNKGEIMSVKITKGNKRDLSVSSVFSKGLSGKLFSDKAYISKELFHQLFSNGLRLFTNLRKDMKTYLLD
IQDNRLLNKRSLIESVFNVLKKHMHLEHTRHPSPLNFFVHIIASLASYSISKLLIPIFSSFPYSALPYSGIIKLGYIEIN
>Mature_160_residues
MFLCFELHLIINNKGEIMSVKITKGNKRDLSVSSVFSKGLSGKLFSDKAYISKELFHQLFSNGLRLFTNLRKDMKTYLLD
IQDNRLLNKRSLIESVFNVLKKHMHLEHTRHPSPLNFFVHIIASLASYSISKLLIPIFSSFPYSALPYSGIIKLGYIEIN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18395; Mature: 18395

Theoretical pI: Translated: 10.37; Mature: 10.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFLCFELHLIINNKGEIMSVKITKGNKRDLSVSSVFSKGLSGKLFSDKAYISKELFHQLF
CEEEEEEEEEECCCCCEEEEEEECCCCCCCHHHHHHHCCCCCCEECCHHHHHHHHHHHHH
SNGLRLFTNLRKDMKTYLLDIQDNRLLNKRSLIESVFNVLKKHMHLEHTRHPSPLNFFVH
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
IIASLASYSISKLLIPIFSSFPYSALPYSGIIKLGYIEIN
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEEC
>Mature Secondary Structure
MFLCFELHLIINNKGEIMSVKITKGNKRDLSVSSVFSKGLSGKLFSDKAYISKELFHQLF
CEEEEEEEEEECCCCCEEEEEEECCCCCCCHHHHHHHCCCCCCEECCHHHHHHHHHHHHH
SNGLRLFTNLRKDMKTYLLDIQDNRLLNKRSLIESVFNVLKKHMHLEHTRHPSPLNFFVH
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
IIASLASYSISKLLIPIFSSFPYSALPYSGIIKLGYIEIN
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA