Click here to switch to the map view.

The map label for this gene is traN [H]

Identifier: 189184733

GI number: 189184733

Start: 1856003

End: 1857697

Strand: Direct

Name: traN [H]

Synonym: OTT_1826

Alternate gene names: 189184733

Gene position: 1856003-1857697 (Clockwise)

Preceding gene: 189184732

Following gene: 189184734

Centisome position: 92.39

GC content: 33.92

Gene sequence:

>1695_bases
ATGAAGCAACTTATGGTACTAGTCTTGATGATATTTAACATCAATAGTTGCATAGCTTCAATGCAAAGCAGTTATAATGA
AGCTAGCAACTATAATGTAAATCTTGGAAATTCTTCAAATACACAAGAATTATTTCATCAAGGTAGTAATGTCAATTATC
CTAATAATGATGAGGATTTAACCTATCATGGCCGTAATCAGCTTGGTACAGAAAGTGGAACAGTGTTATTTCAAGCTGAA
AACAGTAAAAATAACGCCTTAACTCAACATAATATCAATGATCAAAATTATATGATAGCTAATTCAATGAGAATTGAATC
TGATCCTTTAAGTGCCCTTGATAGCAGTAACTTCGTAACTCAGACAAGTAAAACTAATACTGAAATTATTCAAAGTTGTA
CTGAAGGCAGTAATTTCAATATTGAACTTATTCGAGAATTAAACGTTGAGTGCAGATTAGAGAATGTATGGCTTCCATGG
CAAAACCAGCAAATGGAATTTGCAACAGAAGAAATAAAGGAGAATCATAGTAATTGGCTTAAGAGTCGTAGCGATGTCTA
TGATGATGAATCAGGTGCACAAATATACTGCCTAGCAGATGATCCCGAAGCAATTGTAAAACAAATGAAAAGGGCTATTG
CTAATAGGCTCAGTGTATCTACACAGCATATTGGTAGAAATTTTTTATTACATGAAATAAATGAAATATGTATACTTCAC
TATGACTACAGAGATAAGACTCAAGAACTAAGGAAAGTAGCAGAATATTGGAAAGTTTTAAACCCTGAACTTGAGCAATT
AACAGAAAGTAACGAATGCTATGAGGTCAATAGAATCAACTATGATGGTGGTGATAGAGTATTTTTCGACAAGTTTAAAG
TCAATCGTCCATATTGGAAACAAAAGATTGTTTTTTCATGTACTAGCGATCCAAAAGATGGTTGCAAACACCTTAAAATT
CAAAATTGCGAATTAAAAAACAGCACTTGCCAAAAATCAGTAGCAAATATTTGTTTACTATGGCAGCACGATTATAGCTG
TTCAACTGAGAAGCAAACAATGCTACACTCATCGTTGCGTAATAACTCGATCTTCTGTTTGGGAGGCAATTGCAACACTC
CGACTATTATACCAAACAGGAATATAGCTAAAGTAGCTCATCTAGCGATGCTAAATCAGATGAGCAAAGATATTAAAACA
AATCCCGTTTCTGTATTTTCAGGAAAACATCGCAAATGCAAAAAAGATGTATTTAGTTTTTTGAATTGCTGCTCTTCAAT
GACAGGCTGGGGGCGTGATATAGGCTTATCGCAATGTAAGTCTAAGGAACAAGAATTAGCTCTATATAGAAAAAAAGGTT
ACTGTTACTATATTGGAACCTACTGTTCTTCAAGAATTCCGATATTGGGCATTTGCTTAGCTAGAAAGTCTACTTATTGC
TGCTTTCAGTCGAAACTGGCAAGAATTTTTCAGGAAGAAGCAAGAAAACAGCTAAAAATGGACTTTGGAACACCTGAATA
TCCAAAGTGTAGAGGCCTTACAGTTGAAGAATTACAAAAAGTTGATTTCACTAAAATCAATATGGATGAACTATTTGGTG
ATATACTCACTAAGGCTCAAAACAGCATGAACAAAGACATTATTGCAGGAATCAAAGATAAAGTTCATCGTATGCAACAA
AGTAACTCTAAATGA

Upstream 100 bases:

>100_bases
CAGTGATAGTAATAGATGATGAAAAAAGAGGATTAACCAAGAAATTAACTGGCCATATTCCATTATCTACAGCTTTAGAA
ATTATGAATGAGAATGCTCT

Downstream 100 bases:

>100_bases
GCAGATTACTAATGGTTATGATATTAATTAGTAGTTTTTCCACTGTTGATGCTTCACCAACAGGTTTTTTATGGTACAAT
GATAAACGTGGTCATGAGCC

Product: putative conjugative transfer protein TraN

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 564; Mature: 564

Protein sequence:

>564_residues
MKQLMVLVLMIFNINSCIASMQSSYNEASNYNVNLGNSSNTQELFHQGSNVNYPNNDEDLTYHGRNQLGTESGTVLFQAE
NSKNNALTQHNINDQNYMIANSMRIESDPLSALDSSNFVTQTSKTNTEIIQSCTEGSNFNIELIRELNVECRLENVWLPW
QNQQMEFATEEIKENHSNWLKSRSDVYDDESGAQIYCLADDPEAIVKQMKRAIANRLSVSTQHIGRNFLLHEINEICILH
YDYRDKTQELRKVAEYWKVLNPELEQLTESNECYEVNRINYDGGDRVFFDKFKVNRPYWKQKIVFSCTSDPKDGCKHLKI
QNCELKNSTCQKSVANICLLWQHDYSCSTEKQTMLHSSLRNNSIFCLGGNCNTPTIIPNRNIAKVAHLAMLNQMSKDIKT
NPVSVFSGKHRKCKKDVFSFLNCCSSMTGWGRDIGLSQCKSKEQELALYRKKGYCYYIGTYCSSRIPILGICLARKSTYC
CFQSKLARIFQEEARKQLKMDFGTPEYPKCRGLTVEELQKVDFTKINMDELFGDILTKAQNSMNKDIIAGIKDKVHRMQQ
SNSK

Sequences:

>Translated_564_residues
MKQLMVLVLMIFNINSCIASMQSSYNEASNYNVNLGNSSNTQELFHQGSNVNYPNNDEDLTYHGRNQLGTESGTVLFQAE
NSKNNALTQHNINDQNYMIANSMRIESDPLSALDSSNFVTQTSKTNTEIIQSCTEGSNFNIELIRELNVECRLENVWLPW
QNQQMEFATEEIKENHSNWLKSRSDVYDDESGAQIYCLADDPEAIVKQMKRAIANRLSVSTQHIGRNFLLHEINEICILH
YDYRDKTQELRKVAEYWKVLNPELEQLTESNECYEVNRINYDGGDRVFFDKFKVNRPYWKQKIVFSCTSDPKDGCKHLKI
QNCELKNSTCQKSVANICLLWQHDYSCSTEKQTMLHSSLRNNSIFCLGGNCNTPTIIPNRNIAKVAHLAMLNQMSKDIKT
NPVSVFSGKHRKCKKDVFSFLNCCSSMTGWGRDIGLSQCKSKEQELALYRKKGYCYYIGTYCSSRIPILGICLARKSTYC
CFQSKLARIFQEEARKQLKMDFGTPEYPKCRGLTVEELQKVDFTKINMDELFGDILTKAQNSMNKDIIAGIKDKVHRMQQ
SNSK
>Mature_564_residues
MKQLMVLVLMIFNINSCIASMQSSYNEASNYNVNLGNSSNTQELFHQGSNVNYPNNDEDLTYHGRNQLGTESGTVLFQAE
NSKNNALTQHNINDQNYMIANSMRIESDPLSALDSSNFVTQTSKTNTEIIQSCTEGSNFNIELIRELNVECRLENVWLPW
QNQQMEFATEEIKENHSNWLKSRSDVYDDESGAQIYCLADDPEAIVKQMKRAIANRLSVSTQHIGRNFLLHEINEICILH
YDYRDKTQELRKVAEYWKVLNPELEQLTESNECYEVNRINYDGGDRVFFDKFKVNRPYWKQKIVFSCTSDPKDGCKHLKI
QNCELKNSTCQKSVANICLLWQHDYSCSTEKQTMLHSSLRNNSIFCLGGNCNTPTIIPNRNIAKVAHLAMLNQMSKDIKT
NPVSVFSGKHRKCKKDVFSFLNCCSSMTGWGRDIGLSQCKSKEQELALYRKKGYCYYIGTYCSSRIPILGICLARKSTYC
CFQSKLARIFQEEARKQLKMDFGTPEYPKCRGLTVEELQKVDFTKINMDELFGDILTKAQNSMNKDIIAGIKDKVHRMQQ
SNSK

Specific function: Essential for F plasmid conjugative transfer. May interact with the recipient cell surface to stabilize mating pairs initiated by F-pili. May interact with traG [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009726
- InterPro:   IPR014121 [H]

Pfam domain/function: PF06986 TraN [H]

EC number: NA

Molecular weight: Translated: 64818; Mature: 64818

Theoretical pI: Translated: 7.73; Mature: 7.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
4.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQLMVLVLMIFNINSCIASMQSSYNEASNYNVNLGNSSNTQELFHQGSNVNYPNNDEDL
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHCCCCCCCCCCCCCE
TYHGRNQLGTESGTVLFQAENSKNNALTQHNINDQNYMIANSMRIESDPLSALDSSNFVT
EECCCCCCCCCCCEEEEEECCCCCCCCEECCCCCCCEEEECCEEECCCCHHHHCCCCCEE
QTSKTNTEIIQSCTEGSNFNIELIRELNVECRLENVWLPWQNQQMEFATEEIKENHSNWL
ECCCCHHHHHHHHCCCCCCCEEEEEECCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHH
KSRSDVYDDESGAQIYCLADDPEAIVKQMKRAIANRLSVSTQHIGRNFLLHEINEICILH
HHCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE
YDYRDKTQELRKVAEYWKVLNPELEQLTESNECYEVNRINYDGGDRVFFDKFKVNRPYWK
ECCCCHHHHHHHHHHHHHHCCHHHHHHCCCCCCEEEEEECCCCCCEEEEEEEECCCCHHH
QKIVFSCTSDPKDGCKHLKIQNCELKNSTCQKSVANICLLWQHDYSCSTEKQTMLHSSLR
CEEEEEECCCCHHHHHCCEEECCCCCCHHHHHHHHHEEEEEECCCCCCCHHHHHHHHHHC
NNSIFCLGGNCNTPTIIPNRNIAKVAHLAMLNQMSKDIKTNPVSVFSGKHRKCKKDVFSF
CCCEEEECCCCCCCEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH
LNCCSSMTGWGRDIGLSQCKSKEQELALYRKKGYCYYIGTYCSSRIPILGICLARKSTYC
HHHHHHCCCCCCCCCHHHHHCHHHHHHHHHHCCCEEEEECCCCCCCCEEEEEHHCCCHHH
CFQSKLARIFQEEARKQLKMDFGTPEYPKCRGLTVEELQKVDFTKINMDELFGDILTKAQ
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHH
NSMNKDIIAGIKDKVHRMQQSNSK
HHCCHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKQLMVLVLMIFNINSCIASMQSSYNEASNYNVNLGNSSNTQELFHQGSNVNYPNNDEDL
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHCCCCCCCCCCCCCE
TYHGRNQLGTESGTVLFQAENSKNNALTQHNINDQNYMIANSMRIESDPLSALDSSNFVT
EECCCCCCCCCCCEEEEEECCCCCCCCEECCCCCCCEEEECCEEECCCCHHHHCCCCCEE
QTSKTNTEIIQSCTEGSNFNIELIRELNVECRLENVWLPWQNQQMEFATEEIKENHSNWL
ECCCCHHHHHHHHCCCCCCCEEEEEECCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHH
KSRSDVYDDESGAQIYCLADDPEAIVKQMKRAIANRLSVSTQHIGRNFLLHEINEICILH
HHCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE
YDYRDKTQELRKVAEYWKVLNPELEQLTESNECYEVNRINYDGGDRVFFDKFKVNRPYWK
ECCCCHHHHHHHHHHHHHHCCHHHHHHCCCCCCEEEEEECCCCCCEEEEEEEECCCCHHH
QKIVFSCTSDPKDGCKHLKIQNCELKNSTCQKSVANICLLWQHDYSCSTEKQTMLHSSLR
CEEEEEECCCCHHHHHCCEEECCCCCCHHHHHHHHHEEEEEECCCCCCCHHHHHHHHHHC
NNSIFCLGGNCNTPTIIPNRNIAKVAHLAMLNQMSKDIKTNPVSVFSGKHRKCKKDVFSF
CCCEEEECCCCCCCEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH
LNCCSSMTGWGRDIGLSQCKSKEQELALYRKKGYCYYIGTYCSSRIPILGICLARKSTYC
HHHHHHCCCCCCCCCHHHHHCHHHHHHHHHHCCCEEEEECCCCCCCCEEEEEHHCCCHHH
CFQSKLARIFQEEARKQLKMDFGTPEYPKCRGLTVEELQKVDFTKINMDELFGDILTKAQ
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHH
NSMNKDIIAGIKDKVHRMQQSNSK
HHCCHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1593622; 7915817; 2050638 [H]