Definition Orientia tsutsugamushi str. Ikeda, complete genome.
Accession NC_010793
Length 2,008,987

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The map label for this gene is 189184719

Identifier: 189184719

GI number: 189184719

Start: 1843889

End: 1844155

Strand: Direct

Name: 189184719

Synonym: OTT_1812

Alternate gene names: NA

Gene position: 1843889-1844155 (Clockwise)

Preceding gene: 189184718

Following gene: 189184720

Centisome position: 91.78

GC content: 30.34

Gene sequence:

>267_bases
ATGGCGAACGGAATAGATCCAAGAGAAGTAAAACGTCAACAACAGATAGAAGAAAATGAGAATCATATAAAAGAAAGAGA
AAGAAAAGCTAACGATATTACATTCAAAGAGCTGTGTTATAAGTATATTGAAGAGTATAGCAAAATATATACTATAAACT
GGAAAGAGAATGCTGAAAGAATACATACTTATGCACAAGCATTATATGAAAAAAAGATAAGCAAGATTCGAATGAGTGAT
ATTCAACAAAACCTTGTATGGAGTTAG

Upstream 100 bases:

>100_bases
AAAAATTTAAAAACCAGAGTTTTTAAAAATAAAGATAGTTGTATTTTCATATTTATCTGTTAGAGAAGCTAGAAAAAAAG
CAATAGAATTAAAGAAATTA

Downstream 100 bases:

>100_bases
TACGAGAGTATATGTCTAAGGCTACACAAATAATTAGTGAATGTGCTAGAAGTTATAATATTTATAATACTATCTGACTG
ATATAAACGTTGTGGTAAGA

Product: putative integrase

Products: NA

Alternate protein names: Phage-Related Integrase

Number of amino acids: Translated: 88; Mature: 87

Protein sequence:

>88_residues
MANGIDPREVKRQQQIEENENHIKERERKANDITFKELCYKYIEEYSKIYTINWKENAERIHTYAQALYEKKISKIRMSD
IQQNLVWS

Sequences:

>Translated_88_residues
MANGIDPREVKRQQQIEENENHIKERERKANDITFKELCYKYIEEYSKIYTINWKENAERIHTYAQALYEKKISKIRMSD
IQQNLVWS
>Mature_87_residues
ANGIDPREVKRQQQIEENENHIKERERKANDITFKELCYKYIEEYSKIYTINWKENAERIHTYAQALYEKKISKIRMSDI
QQNLVWS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10781; Mature: 10650

Theoretical pI: Translated: 8.42; Mature: 8.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANGIDPREVKRQQQIEENENHIKERERKANDITFKELCYKYIEEYSKIYTINWKENAER
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHEEECCCHHHHHH
IHTYAQALYEKKISKIRMSDIQQNLVWS
HHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
ANGIDPREVKRQQQIEENENHIKERERKANDITFKELCYKYIEEYSKIYTINWKENAER
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHEEECCCHHHHHH
IHTYAQALYEKKISKIRMSDIQQNLVWS
HHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA