| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189184680
Identifier: 189184680
GI number: 189184680
Start: 1799261
End: 1799476
Strand: Direct
Name: 189184680
Synonym: OTT_1773
Alternate gene names: NA
Gene position: 1799261-1799476 (Clockwise)
Preceding gene: 189184679
Following gene: 189184681
Centisome position: 89.56
GC content: 29.17
Gene sequence:
>216_bases ATGAAGTTTTTATTATTGTTATTATGCTGTATGAGCTTAACCAGCTTCTTTTTCGAAAGCAATTTTGACTGTAAAATTTC TAAAGAGCAAAAATGCAAATCTCTATATGAAATAAAGAATATGGCTGCTCAAGGAGTTTTTGATACTAATAATCTTGAGA AAGTTGAAACATCAAAAATCAAATCAAAAAGACGCTGTATTCTATGCTACAGGTGA
Upstream 100 bases:
>100_bases AACAGTAATAGGAAAACACAAAATCACTCAAGATTTAATGTTAATTTTTTTTCAAAAACTCTAAGATATGTAATGCTTGT TAATGCTACTTCAGGAAAAA
Downstream 100 bases:
>100_bases GCTAAAGCAATTCAAAGCGTAGCTGTTGTTAACACTTCAGCCAAAAAAATCAAAAAAATGTCTTATTATCATCCTAGAAG CAAGAAAGAGGCTGGCAGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 71; Mature: 71
Protein sequence:
>71_residues MKFLLLLLCCMSLTSFFFESNFDCKISKEQKCKSLYEIKNMAAQGVFDTNNLEKVETSKIKSKRRCILCYR
Sequences:
>Translated_71_residues MKFLLLLLCCMSLTSFFFESNFDCKISKEQKCKSLYEIKNMAAQGVFDTNNLEKVETSKIKSKRRCILCYR >Mature_71_residues MKFLLLLLCCMSLTSFFFESNFDCKISKEQKCKSLYEIKNMAAQGVFDTNNLEKVETSKIKSKRRCILCYR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8360; Mature: 8360
Theoretical pI: Translated: 9.12; Mature: 9.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
8.5 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 12.7 %Cys+Met (Translated Protein) 8.5 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 12.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFLLLLLCCMSLTSFFFESNFDCKISKEQKCKSLYEIKNMAAQGVFDTNNLEKVETSKI CHHHHHHHHHHHHHHHHHCCCCCCEECHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH KSKRRCILCYR HCCCCEEEECC >Mature Secondary Structure MKFLLLLLCCMSLTSFFFESNFDCKISKEQKCKSLYEIKNMAAQGVFDTNNLEKVETSKI CHHHHHHHHHHHHHHHHHCCCCCCEECHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH KSKRRCILCYR HCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA