| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189184582
Identifier: 189184582
GI number: 189184582
Start: 1700473
End: 1700865
Strand: Direct
Name: 189184582
Synonym: OTT_1675
Alternate gene names: NA
Gene position: 1700473-1700865 (Clockwise)
Preceding gene: 189184581
Following gene: 189184587
Centisome position: 84.64
GC content: 35.88
Gene sequence:
>393_bases TTGAATAAAATAAGCTTTAAACATGGATATGCTACAACAGTTTGTAACCCACAAACAGCTGTCAAAAAAGATGTATATGT TCTTCATAATAATGGTGTAGGAATAGAAAGTTCTAACATAAGCATGATAGGGAATGCAGAGCAAGTACGGCTGTACTACA ATGTGCAAGCTACAAAAAATGTTGCTAACCTAATAGAGCAGCTTAGCACAGCTAAGACAGACTCTATCAATTCAAAAGAG GAGAATAATGATGTTCAAGCAAATGAAGTAAGGCAATATCAATCTGCTAGCAAGGCAGAACTACAAAAATTGAGGGATGC AATAGCTTATAGAGCTGACACTATAGCTTGTGATCTTCTTGGAGATCCAAATAAGCGCCTATCTAAACAATGA
Upstream 100 bases:
>100_bases GACCAAATGAGAAATCAGCTAGCATCACTCTGAAAACTGCTAATGTGATGAAAATAAGTTTGTAGCTAAGACAGATACAG GAAACGAGGTAAGCTTTGAT
Downstream 100 bases:
>100_bases TCTTAGGTAAACATAACCTTTTTCTTTATCAAGTATTAAAACATGTTTGAACTTTATTAAAAACTCTTCCCAAAGCTTTA ACATATCTCGTTGATGAATG
Product: putative conjugative transfer protein TraI
Products: NA
Alternate protein names: Conjugative Transfer Protein TraA; MobA/MobL Family Protein; Conjugal Transfer Protein TraA
Number of amino acids: Translated: 130; Mature: 130
Protein sequence:
>130_residues MNKISFKHGYATTVCNPQTAVKKDVYVLHNNGVGIESSNISMIGNAEQVRLYYNVQATKNVANLIEQLSTAKTDSINSKE ENNDVQANEVRQYQSASKAELQKLRDAIAYRADTIACDLLGDPNKRLSKQ
Sequences:
>Translated_130_residues MNKISFKHGYATTVCNPQTAVKKDVYVLHNNGVGIESSNISMIGNAEQVRLYYNVQATKNVANLIEQLSTAKTDSINSKE ENNDVQANEVRQYQSASKAELQKLRDAIAYRADTIACDLLGDPNKRLSKQ >Mature_130_residues MNKISFKHGYATTVCNPQTAVKKDVYVLHNNGVGIESSNISMIGNAEQVRLYYNVQATKNVANLIEQLSTAKTDSINSKE ENNDVQANEVRQYQSASKAELQKLRDAIAYRADTIACDLLGDPNKRLSKQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14435; Mature: 14435
Theoretical pI: Translated: 8.66; Mature: 8.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKISFKHGYATTVCNPQTAVKKDVYVLHNNGVGIESSNISMIGNAEQVRLYYNVQATKN CCCCCCCCCCEEEEECCCHHHCCCEEEEECCCCCEECCCEEEECCCEEEEEEEECCCHHH VANLIEQLSTAKTDSINSKEENNDVQANEVRQYQSASKAELQKLRDAIAYRADTIACDLL HHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHCCCEEEECC GDPNKRLSKQ CCCHHCCCCC >Mature Secondary Structure MNKISFKHGYATTVCNPQTAVKKDVYVLHNNGVGIESSNISMIGNAEQVRLYYNVQATKN CCCCCCCCCCEEEEECCCHHHCCCEEEEECCCCCEECCCEEEECCCEEEEEEEECCCHHH VANLIEQLSTAKTDSINSKEENNDVQANEVRQYQSASKAELQKLRDAIAYRADTIACDLL HHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHCCCEEEECC GDPNKRLSKQ CCCHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA