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The map label for this gene is traN [H]

Identifier: 189184514

GI number: 189184514

Start: 1637780

End: 1639471

Strand: Direct

Name: traN [H]

Synonym: OTT_1607

Alternate gene names: 189184514

Gene position: 1637780-1639471 (Clockwise)

Preceding gene: 189184513

Following gene: 189184515

Centisome position: 81.52

GC content: 33.81

Gene sequence:

>1692_bases
ATGAGATTATTATCTATATTAACTTTAATAACGCTCAATATTAGCTGTTGTTTAGCTTCAATGCAGAACGACTATAATGA
AGCTAAAAACTATAATGTAAATCTTGGAAATTCTTCAAATACACAAGAATTATTTCATCAAGGTAGTAATGTCAATTATC
CTAATAATGATGAGGATTTAACCTATCATGGCCGTAATCAGCTTGGTACAGAAAGTGGGGCAATGTTATTTCAAGCTGAA
AACAGTAAAAACAATGCCTTAACTCAACATAATATCAACGATCAAAATTATATGATAGCTAATTCAATGAGAATTGAATC
TGATCCTTTAAGTGCCCTTGATAGCAGTAATTTCGTAACTCAGACAAGTACAACTAATACTGAAATCATTCAAAGCTGTA
CTGAAGGCAGTAAGTTCAATATTGAACTTATTCGAGAATTAAATGTTGAGTGCAGATTAGAGAATGTATGGCTTCCATGG
CAAAGCCGGCAAATGGAATTTGCAAAAAAAGAAATAGTGAAGAATCATAGCAATTGGCTTAAGAGTCGTAGCGATGTCTA
TGATAAATCAGGGGCGCAAATATACTGCCTAGTAGATGATCCCGAAGCAATTGAAAGACAAATGAAAATGGCTATTGCTA
ATAGGCTCGGTGTATCTACACAGCATATTGGTAGAAATTTTTTATTACATGAAATGAAAAAAATATGTATACTTGAATAT
GACTACAGAGATAAGACTCAAGAACTAAGGGAAGTAGCAGAATATTGGAAAGTTTTAAACCCTGAACTTGAGCAATTAAC
TGAGAGTAATGAATGCTATGAGGTCAATAGAATCAACTATGATGGTGGTGATAGAGTATTTTTTGACAAATTTAAAGTCA
ATCGTCCATACTGGAAACAAAAGATTGTTTTTTCTTGTACTAGCGATCCAAAAGATGGTTGCAAACACCTTAAAATTCAA
AATTGCGAATTAAAAAATAGCACTTGCCAAAAATCAGTAGCAAATATTTGTTTACTATGGCAGCATGATTATAGCTGTTC
AACTGAGAAGCAAACGATGCTACACTCATCGTTGCGTAATAACTCGATCTTCTGTTTAGGAGGCAATTGCAATACTCCGA
CTATTATACCAAACAGAGATATAGCTAAAGTAGCTCATCTAGCAATGCTAAATCAGATGAGCAAGGACATTAAAACAAAT
CCTGTTTCTGTATTTTCAGGCAAACCTCGCAAATGCAAAAAAGATGTATTTAGTTTTTTGAATTGCTGCTCTTCAATGAC
TGGCTGGGGGCGTGATATAGGCTTATCGCAATGCAAATCTAAGGAACAAGAATTAGCTCTATATAGAAAAAAAGGTTACT
GCTATTACATTGGAACCTATTGTTCTTCAAGAATTCCGATATTAGGTATTTGCTTAGCTAGAAAGTCTACTTATTGCTGC
TTTCAGTCGAAACTGGCAAGAATTTTTCAGGAAGAAGCAAGAAAACAGCTAAAAATAGACTTTGGAACACCTGAATGTCC
AAATTGTAGAGGCCTTACTGTTAAGGAATTACAAAAAGTTGATTTCACTAAAATCAATATGGATGAACTATTTGGCGATA
TACTCACTAAGGCTCAAAACAGCATGAACAAAGACATTATTGCAGGAATCAAAGATAAAGTTCATCGTATGCAACAAAGT
CAGTCTAAATGA

Upstream 100 bases:

>100_bases
CAGTAATAGTAATAGATGATAAAAAAAGAGGATTAACCAAGAAATTAACTGGGCACATTCCTTTAGCAAGTGCATTAGAA
ATTATGAATGAGAATACTCC

Downstream 100 bases:

>100_bases
GCAGATTACTAATGTTTATGATATTAATTAGTCATTTATCCACTGTTGATGCTTCACCAACAGGATTTCTATGGTATAAT
GATAAACATGATCATGAGCT

Product: putative conjugative transfer protein TraN

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 563; Mature: 563

Protein sequence:

>563_residues
MRLLSILTLITLNISCCLASMQNDYNEAKNYNVNLGNSSNTQELFHQGSNVNYPNNDEDLTYHGRNQLGTESGAMLFQAE
NSKNNALTQHNINDQNYMIANSMRIESDPLSALDSSNFVTQTSTTNTEIIQSCTEGSKFNIELIRELNVECRLENVWLPW
QSRQMEFAKKEIVKNHSNWLKSRSDVYDKSGAQIYCLVDDPEAIERQMKMAIANRLGVSTQHIGRNFLLHEMKKICILEY
DYRDKTQELREVAEYWKVLNPELEQLTESNECYEVNRINYDGGDRVFFDKFKVNRPYWKQKIVFSCTSDPKDGCKHLKIQ
NCELKNSTCQKSVANICLLWQHDYSCSTEKQTMLHSSLRNNSIFCLGGNCNTPTIIPNRDIAKVAHLAMLNQMSKDIKTN
PVSVFSGKPRKCKKDVFSFLNCCSSMTGWGRDIGLSQCKSKEQELALYRKKGYCYYIGTYCSSRIPILGICLARKSTYCC
FQSKLARIFQEEARKQLKIDFGTPECPNCRGLTVKELQKVDFTKINMDELFGDILTKAQNSMNKDIIAGIKDKVHRMQQS
QSK

Sequences:

>Translated_563_residues
MRLLSILTLITLNISCCLASMQNDYNEAKNYNVNLGNSSNTQELFHQGSNVNYPNNDEDLTYHGRNQLGTESGAMLFQAE
NSKNNALTQHNINDQNYMIANSMRIESDPLSALDSSNFVTQTSTTNTEIIQSCTEGSKFNIELIRELNVECRLENVWLPW
QSRQMEFAKKEIVKNHSNWLKSRSDVYDKSGAQIYCLVDDPEAIERQMKMAIANRLGVSTQHIGRNFLLHEMKKICILEY
DYRDKTQELREVAEYWKVLNPELEQLTESNECYEVNRINYDGGDRVFFDKFKVNRPYWKQKIVFSCTSDPKDGCKHLKIQ
NCELKNSTCQKSVANICLLWQHDYSCSTEKQTMLHSSLRNNSIFCLGGNCNTPTIIPNRDIAKVAHLAMLNQMSKDIKTN
PVSVFSGKPRKCKKDVFSFLNCCSSMTGWGRDIGLSQCKSKEQELALYRKKGYCYYIGTYCSSRIPILGICLARKSTYCC
FQSKLARIFQEEARKQLKIDFGTPECPNCRGLTVKELQKVDFTKINMDELFGDILTKAQNSMNKDIIAGIKDKVHRMQQS
QSK
>Mature_563_residues
MRLLSILTLITLNISCCLASMQNDYNEAKNYNVNLGNSSNTQELFHQGSNVNYPNNDEDLTYHGRNQLGTESGAMLFQAE
NSKNNALTQHNINDQNYMIANSMRIESDPLSALDSSNFVTQTSTTNTEIIQSCTEGSKFNIELIRELNVECRLENVWLPW
QSRQMEFAKKEIVKNHSNWLKSRSDVYDKSGAQIYCLVDDPEAIERQMKMAIANRLGVSTQHIGRNFLLHEMKKICILEY
DYRDKTQELREVAEYWKVLNPELEQLTESNECYEVNRINYDGGDRVFFDKFKVNRPYWKQKIVFSCTSDPKDGCKHLKIQ
NCELKNSTCQKSVANICLLWQHDYSCSTEKQTMLHSSLRNNSIFCLGGNCNTPTIIPNRDIAKVAHLAMLNQMSKDIKTN
PVSVFSGKPRKCKKDVFSFLNCCSSMTGWGRDIGLSQCKSKEQELALYRKKGYCYYIGTYCSSRIPILGICLARKSTYCC
FQSKLARIFQEEARKQLKIDFGTPECPNCRGLTVKELQKVDFTKINMDELFGDILTKAQNSMNKDIIAGIKDKVHRMQQS
QSK

Specific function: Essential for F plasmid conjugative transfer. May interact with the recipient cell surface to stabilize mating pairs initiated by F-pili. May interact with traG [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009726
- InterPro:   IPR014121 [H]

Pfam domain/function: PF06986 TraN [H]

EC number: NA

Molecular weight: Translated: 64631; Mature: 64631

Theoretical pI: Translated: 8.19; Mature: 8.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
7.5 %Cys+Met (Translated Protein)
4.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
7.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLLSILTLITLNISCCLASMQNDYNEAKNYNVNLGNSSNTQELFHQGSNVNYPNNDEDL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHCCCCCCCCCCCCCE
TYHGRNQLGTESGAMLFQAENSKNNALTQHNINDQNYMIANSMRIESDPLSALDSSNFVT
EECCCCCCCCCCCEEEEEECCCCCCCCEECCCCCCCEEEECCEEECCCCHHHCCCCCCEE
QTSTTNTEIIQSCTEGSKFNIELIRELNVECRLENVWLPWQSRQMEFAKKEIVKNHSNWL
ECCCCCHHHHHHHCCCCCEEEHHHHHCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHH
KSRSDVYDKSGAQIYCLVDDPEAIERQMKMAIANRLGVSTQHIGRNFLLHEMKKICILEY
HHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHEEEEE
DYRDKTQELREVAEYWKVLNPELEQLTESNECYEVNRINYDGGDRVFFDKFKVNRPYWKQ
CCCCHHHHHHHHHHHHHHCCHHHHHHCCCCCCEEEEEECCCCCCEEEEEEEECCCCHHHC
KIVFSCTSDPKDGCKHLKIQNCELKNSTCQKSVANICLLWQHDYSCSTEKQTMLHSSLRN
EEEEEECCCCHHHHHCCEEECCCCCCHHHHHHHHHEEEEEECCCCCCCHHHHHHHHHHCC
NSIFCLGGNCNTPTIIPNRDIAKVAHLAMLNQMSKDIKTNPVSVFSGKPRKCKKDVFSFL
CCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHH
NCCSSMTGWGRDIGLSQCKSKEQELALYRKKGYCYYIGTYCSSRIPILGICLARKSTYCC
HHHHHCCCCCCCCCHHHHHCHHHHHHHHHHCCCEEEEECCCCCCCCEEEEEHHCCCHHHH
FQSKLARIFQEEARKQLKIDFGTPECPNCRGLTVKELQKVDFTKINMDELFGDILTKAQN
HHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHH
SMNKDIIAGIKDKVHRMQQSQSK
HCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRLLSILTLITLNISCCLASMQNDYNEAKNYNVNLGNSSNTQELFHQGSNVNYPNNDEDL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHCCCCCCCCCCCCCE
TYHGRNQLGTESGAMLFQAENSKNNALTQHNINDQNYMIANSMRIESDPLSALDSSNFVT
EECCCCCCCCCCCEEEEEECCCCCCCCEECCCCCCCEEEECCEEECCCCHHHCCCCCCEE
QTSTTNTEIIQSCTEGSKFNIELIRELNVECRLENVWLPWQSRQMEFAKKEIVKNHSNWL
ECCCCCHHHHHHHCCCCCEEEHHHHHCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHH
KSRSDVYDKSGAQIYCLVDDPEAIERQMKMAIANRLGVSTQHIGRNFLLHEMKKICILEY
HHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHEEEEE
DYRDKTQELREVAEYWKVLNPELEQLTESNECYEVNRINYDGGDRVFFDKFKVNRPYWKQ
CCCCHHHHHHHHHHHHHHCCHHHHHHCCCCCCEEEEEECCCCCCEEEEEEEECCCCHHHC
KIVFSCTSDPKDGCKHLKIQNCELKNSTCQKSVANICLLWQHDYSCSTEKQTMLHSSLRN
EEEEEECCCCHHHHHCCEEECCCCCCHHHHHHHHHEEEEEECCCCCCCHHHHHHHHHHCC
NSIFCLGGNCNTPTIIPNRDIAKVAHLAMLNQMSKDIKTNPVSVFSGKPRKCKKDVFSFL
CCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHH
NCCSSMTGWGRDIGLSQCKSKEQELALYRKKGYCYYIGTYCSSRIPILGICLARKSTYCC
HHHHHCCCCCCCCCHHHHHCHHHHHHHHHHCCCEEEEECCCCCCCCEEEEEHHCCCHHHH
FQSKLARIFQEEARKQLKIDFGTPECPNCRGLTVKELQKVDFTKINMDELFGDILTKAQN
HHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHH
SMNKDIIAGIKDKVHRMQQSQSK
HCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1593622; 7915817; 2050638 [H]