| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189184462
Identifier: 189184462
GI number: 189184462
Start: 1583064
End: 1584155
Strand: Direct
Name: 189184462
Synonym: OTT_1555
Alternate gene names: NA
Gene position: 1583064-1584155 (Clockwise)
Preceding gene: 189184459
Following gene: 189184463
Centisome position: 78.8
GC content: 29.85
Gene sequence:
>1092_bases ATGCGCCCTGTAGTATTCGATTTTTTAACCAATGGTTGTAATTTTGTTAAAAATAATAGTAACAATAATGACACAATATT TTATAACTTTATTGGAAATATCATTCCACCAGAATGGAGAAAGCTAAGTGGAGATAATGGAAAAGCATTAAGTAAAACAT CTAAACAGCTTTTATCATTCATAGTATTTAGACTACATATCTATTACAACAAAGATATAGATGAATTACAGGAAAGTTAT CAGCTTTATGAAGATAAGCTGAATGTTGGTCAAAGAAGAGTTAGGCAATGCTTAGTAGAATTAAGAGATGCAGGTTTTAT TGAAATTGAAAATAGGACAATCATTAAAGACAATCTTAAGTTACGTAATGTCCCTTGCATAAAAATTCTGAAAAATTTTC AGCACTATAGTGAAAAAGGAAAAGAAGAAAATATAGCCTTACCAGAAAAAAAATTTCGTCCCAACCTGAAAGAAATTTCA GGTCAACCTGAAACTTTTTTCAGGGACATATATAGATATATAAAAAAATCTAAAAGATCTAGATCTACTGAAGGTGAGTT AGTAGAGAATAAAAAAAATGAAAATGAAGAACAAAATTTTCAAAATGTTGATGATTTTGAAAATGATATACAGACTTCAA CCAAAAATTGCAATCAAGACATTGAATCACTAATAACAAATATTCTCAAGTCTTCGAATTGTAAAAAAGAATGGTTCAAA AGGTACAGGCTAGAAGACTTTTACCCACTAACACCAGAAGATGTAGTTACGCTGCAACATAAGTCCGATAGAGGTTTTAA TAATAACATTGCCGAGCAAGTTCTAGCTCTTACAAGAAACAGAGGTGGTAAGAAAACCAGTTCCATGAAAATGATTCAAA CATTAGTGAATCAAGATAAAGTAGAGCTATTACTAATCAAACTATTGGACCGATTGGATAATATTAAAACTGTATTCATA AAGCCAGACAAAAGAAGACAAGAAATCATACTAGAAACGCAGCAAGAATTTATACCTCTTGCTGAATATCTTAAATTACA AGAAATTGCTATAGAGCTAAATAAATACTGTGAGCTTTATACTACCAAATAA
Upstream 100 bases:
>100_bases GTCAACCTTTTGTCAACCTTTTGAACAAAAATTTGATGGTAATTTGTAAAAAAATTATTTTCTAAAACACCTACTATAGC TGTATTTTCGGAGATGAAAA
Downstream 100 bases:
>100_bases GCTAAAGTTTAATAGGTGGTTAATGTAGTGAATTGCAGAAATTAAAATTCAATAAGAGAATGTTCATGTAAGTTATTTTG TTGTATAATTTAAAAAGAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 363; Mature: 363
Protein sequence:
>363_residues MRPVVFDFLTNGCNFVKNNSNNNDTIFYNFIGNIIPPEWRKLSGDNGKALSKTSKQLLSFIVFRLHIYYNKDIDELQESY QLYEDKLNVGQRRVRQCLVELRDAGFIEIENRTIIKDNLKLRNVPCIKILKNFQHYSEKGKEENIALPEKKFRPNLKEIS GQPETFFRDIYRYIKKSKRSRSTEGELVENKKNENEEQNFQNVDDFENDIQTSTKNCNQDIESLITNILKSSNCKKEWFK RYRLEDFYPLTPEDVVTLQHKSDRGFNNNIAEQVLALTRNRGGKKTSSMKMIQTLVNQDKVELLLIKLLDRLDNIKTVFI KPDKRRQEIILETQQEFIPLAEYLKLQEIAIELNKYCELYTTK
Sequences:
>Translated_363_residues MRPVVFDFLTNGCNFVKNNSNNNDTIFYNFIGNIIPPEWRKLSGDNGKALSKTSKQLLSFIVFRLHIYYNKDIDELQESY QLYEDKLNVGQRRVRQCLVELRDAGFIEIENRTIIKDNLKLRNVPCIKILKNFQHYSEKGKEENIALPEKKFRPNLKEIS GQPETFFRDIYRYIKKSKRSRSTEGELVENKKNENEEQNFQNVDDFENDIQTSTKNCNQDIESLITNILKSSNCKKEWFK RYRLEDFYPLTPEDVVTLQHKSDRGFNNNIAEQVLALTRNRGGKKTSSMKMIQTLVNQDKVELLLIKLLDRLDNIKTVFI KPDKRRQEIILETQQEFIPLAEYLKLQEIAIELNKYCELYTTK >Mature_363_residues MRPVVFDFLTNGCNFVKNNSNNNDTIFYNFIGNIIPPEWRKLSGDNGKALSKTSKQLLSFIVFRLHIYYNKDIDELQESY QLYEDKLNVGQRRVRQCLVELRDAGFIEIENRTIIKDNLKLRNVPCIKILKNFQHYSEKGKEENIALPEKKFRPNLKEIS GQPETFFRDIYRYIKKSKRSRSTEGELVENKKNENEEQNFQNVDDFENDIQTSTKNCNQDIESLITNILKSSNCKKEWFK RYRLEDFYPLTPEDVVTLQHKSDRGFNNNIAEQVLALTRNRGGKKTSSMKMIQTLVNQDKVELLLIKLLDRLDNIKTVFI KPDKRRQEIILETQQEFIPLAEYLKLQEIAIELNKYCELYTTK
Specific function: Unknown
COG id: COG0317
COG function: function code TK; Guanosine polyphosphate pyrophosphohydrolases/synthetases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42949; Mature: 42949
Theoretical pI: Translated: 9.03; Mature: 9.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRPVVFDFLTNGCNFVKNNSNNNDTIFYNFIGNIIPPEWRKLSGDNGKALSKTSKQLLSF CCCCHHHHHHCCCCEEECCCCCCCEEEEEECCCCCCCHHHHCCCCCCCHHHHHHHHHHHH IVFRLHIYYNKDIDELQESYQLYEDKLNVGQRRVRQCLVELRDAGFIEIENRTIIKDNLK HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCEEEECCCE LRNVPCIKILKNFQHYSEKGKEENIALPEKKFRPNLKEISGQPETFFRDIYRYIKKSKRS ECCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHC RSTEGELVENKKNENEEQNFQNVDDFENDIQTSTKNCNQDIESLITNILKSSNCKKEWFK CCCCCHHHHCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH RYRLEDFYPLTPEDVVTLQHKSDRGFNNNIAEQVLALTRNRGGKKTSSMKMIQTLVNQDK HHCCCCCCCCCHHHHEEEECCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCH VELLLIKLLDRLDNIKTVFIKPDKRRQEIILETQQEFIPLAEYLKLQEIAIELNKYCELY HHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TTK CCC >Mature Secondary Structure MRPVVFDFLTNGCNFVKNNSNNNDTIFYNFIGNIIPPEWRKLSGDNGKALSKTSKQLLSF CCCCHHHHHHCCCCEEECCCCCCCEEEEEECCCCCCCHHHHCCCCCCCHHHHHHHHHHHH IVFRLHIYYNKDIDELQESYQLYEDKLNVGQRRVRQCLVELRDAGFIEIENRTIIKDNLK HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCEEEECCCE LRNVPCIKILKNFQHYSEKGKEENIALPEKKFRPNLKEISGQPETFFRDIYRYIKKSKRS ECCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHC RSTEGELVENKKNENEEQNFQNVDDFENDIQTSTKNCNQDIESLITNILKSSNCKKEWFK CCCCCHHHHCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH RYRLEDFYPLTPEDVVTLQHKSDRGFNNNIAEQVLALTRNRGGKKTSSMKMIQTLVNQDK HHCCCCCCCCCHHHHEEEECCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCH VELLLIKLLDRLDNIKTVFIKPDKRRQEIILETQQEFIPLAEYLKLQEIAIELNKYCELY HHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TTK CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA