| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189184376
Identifier: 189184376
GI number: 189184376
Start: 1500406
End: 1500900
Strand: Direct
Name: 189184376
Synonym: OTT_1469
Alternate gene names: NA
Gene position: 1500406-1500900 (Clockwise)
Preceding gene: 189184375
Following gene: 189184377
Centisome position: 74.68
GC content: 27.88
Gene sequence:
>495_bases ATGGAAAATAACAATATATATTTGATTCAATATATTAGGCATATAGTAAATAACTGCAATAAAACAAAGCGGAATATAGT AGAACTAGTAGGATATAAGCAAGATGCAATAGCAAAAATAACAGATACGTTAGGCTCACTTGATGAACTAATAAATCATC TAAATGATAAAATTTGTGTATTTAGAAAAGACATAGAATCAAAGAATGTAGAACTAGAAAATTTTAGCCTACAAACGTTT GTAAAGGATACTGTCGCTAAACTAAAAGCAATTGTTGAAGATGATAGAATAGATCTAAAAAGCAATTTTCAGGCTAATAT AAAAGACAGTATTATTGGAGATAGTTTACGAATAAGAGCTGTACTAAGCCAGTTAGCTGAAAGTGCCATTATATATGGTA CTAAAGGTACAACGATTAATATTTGTGTTCATTTGTTACCTTCTCAAGATGGAAAAACAGATTCAAAAGATAAAATATTA CAATTTGTAGTATAA
Upstream 100 bases:
>100_bases ATATGTCATATACCAATCAGCTTAGCTAACTGTTAGCTAAGCTTGCTATTTTAAATTTCTAAAAAAACAAAGTTAATAAA CTTAACCATAGGAGAATAAT
Downstream 100 bases:
>100_bases AACATAGGCCCTAGCATTCAGAAAGAAAAATTGCAAAAGATGAATTCTGAATTAAGCAATTCGAATTTAACAGAACATCA AGAGCTAGGACAAGGGTTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 164; Mature: 164
Protein sequence:
>164_residues MENNNIYLIQYIRHIVNNCNKTKRNIVELVGYKQDAIAKITDTLGSLDELINHLNDKICVFRKDIESKNVELENFSLQTF VKDTVAKLKAIVEDDRIDLKSNFQANIKDSIIGDSLRIRAVLSQLAESAIIYGTKGTTINICVHLLPSQDGKTDSKDKIL QFVV
Sequences:
>Translated_164_residues MENNNIYLIQYIRHIVNNCNKTKRNIVELVGYKQDAIAKITDTLGSLDELINHLNDKICVFRKDIESKNVELENFSLQTF VKDTVAKLKAIVEDDRIDLKSNFQANIKDSIIGDSLRIRAVLSQLAESAIIYGTKGTTINICVHLLPSQDGKTDSKDKIL QFVV >Mature_164_residues MENNNIYLIQYIRHIVNNCNKTKRNIVELVGYKQDAIAKITDTLGSLDELINHLNDKICVFRKDIESKNVELENFSLQTF VKDTVAKLKAIVEDDRIDLKSNFQANIKDSIIGDSLRIRAVLSQLAESAIIYGTKGTTINICVHLLPSQDGKTDSKDKIL QFVV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18551; Mature: 18551
Theoretical pI: Translated: 7.44; Mature: 7.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENNNIYLIQYIRHIVNNCNKTKRNIVELVGYKQDAIAKITDTLGSLDELINHLNDKICV CCCCCEEHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCEEE FRKDIESKNVELENFSLQTFVKDTVAKLKAIVEDDRIDLKSNFQANIKDSIIGDSLRIRA EECCCCCCCCEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCHHHHHH VLSQLAESAIIYGTKGTTINICVHLLPSQDGKTDSKDKILQFVV HHHHHHHHHEEECCCCCEEEEEEEEECCCCCCCCCHHHHHHHCC >Mature Secondary Structure MENNNIYLIQYIRHIVNNCNKTKRNIVELVGYKQDAIAKITDTLGSLDELINHLNDKICV CCCCCEEHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCEEE FRKDIESKNVELENFSLQTFVKDTVAKLKAIVEDDRIDLKSNFQANIKDSIIGDSLRIRA EECCCCCCCCEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCHHHHHH VLSQLAESAIIYGTKGTTINICVHLLPSQDGKTDSKDKILQFVV HHHHHHHHHEEECCCCCEEEEEEEEECCCCCCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA