Definition Orientia tsutsugamushi str. Ikeda, complete genome.
Accession NC_010793
Length 2,008,987

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The map label for this gene is 189184332

Identifier: 189184332

GI number: 189184332

Start: 1459823

End: 1460737

Strand: Direct

Name: 189184332

Synonym: OTT_1425

Alternate gene names: NA

Gene position: 1459823-1460737 (Clockwise)

Preceding gene: 189184331

Following gene: 189184333

Centisome position: 72.66

GC content: 25.25

Gene sequence:

>915_bases
ATGATAGATTTTGGCATTAAGCTGTATTTAATAAACTATTGTCTTATGATAACTAACTTTATTAGTAATATAATAAATCC
AATAAAACTCATTATATATAACCTTTATATGGCAGTTTGGAGCCTGGATTTTTATAATGATATTAGAAAAAGATATATTG
GTTATGGATTTCGTTACATTACAGCAATAGTATGTTTAGGAGCAATAGCTTGGTTATTTGCTAAATTAAGCATGTTTAAG
GATGTTAATGATTATTTAACCAGAAATAAATTAGAGTCACAAACAGGTTTAATAATTGATAATATACTTAGCAAGTGGCC
AGAAATATACTATGATAATCAACAAATTTCATTACTTGAACCTACACCATATTTGATTACAGATGATAATCATACAATAT
TGATTGCTATTGATCCTGAGTCAAAGATAACAGGAGCTGAAATATCTAATATCTTGATTGTTATGGCTAAAGATAATATT
CAAATAGTAGATCATGCAACTGGTCGTACTACTAAGATTTTTTATAATTCAATCTTAGGCAATAAAAAATTGCTAATAGA
TAGCTCATATATTAAAAACTTATTAACTGAAGTTTTACAAAAAAAATATAATATAATCTTATTATGTATTTTAATGCTAT
ATCCATTAGTTGTACTATGGTTTTTAATATTTATAGCATTTAAAAAAATTATAATCATAGTAACTATTGGCACTTTAATT
AATTTTTTCACAAAATGTTGTTCTCTTAAAGATATCTGTAGGCTTGGAGCATTTTCTTCAGCTCCAGCAATATTAATTGC
TATTATGATAATTGCTTTTAATCCAAAATATTTATGGATTAGTGATTATGTACAACTTTGGTGTAATTTTATTGCAATCT
CAAGTCTAGTAAAATCAGAGAAAACAACTGTATGA

Upstream 100 bases:

>100_bases
AAAACTATTTATAGCTGATGATTTGTTAGCAAAACATGATGAGAGATATATGCCCCCTGAAAGCTAGTAAATATTAATCT
GATTAATATTTACTTTTTAA

Downstream 100 bases:

>100_bases
TTATTAATAGCATAATTGAGTTTCTTCAAGCTGCTGATATTAAAAAGCAAATTTTAGGTATAGATTTTGGTGAAAAAAAA
GTTGGAGTTGCTATTTCTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 304; Mature: 304

Protein sequence:

>304_residues
MIDFGIKLYLINYCLMITNFISNIINPIKLIIYNLYMAVWSLDFYNDIRKRYIGYGFRYITAIVCLGAIAWLFAKLSMFK
DVNDYLTRNKLESQTGLIIDNILSKWPEIYYDNQQISLLEPTPYLITDDNHTILIAIDPESKITGAEISNILIVMAKDNI
QIVDHATGRTTKIFYNSILGNKKLLIDSSYIKNLLTEVLQKKYNIILLCILMLYPLVVLWFLIFIAFKKIIIIVTIGTLI
NFFTKCCSLKDICRLGAFSSAPAILIAIMIIAFNPKYLWISDYVQLWCNFIAISSLVKSEKTTV

Sequences:

>Translated_304_residues
MIDFGIKLYLINYCLMITNFISNIINPIKLIIYNLYMAVWSLDFYNDIRKRYIGYGFRYITAIVCLGAIAWLFAKLSMFK
DVNDYLTRNKLESQTGLIIDNILSKWPEIYYDNQQISLLEPTPYLITDDNHTILIAIDPESKITGAEISNILIVMAKDNI
QIVDHATGRTTKIFYNSILGNKKLLIDSSYIKNLLTEVLQKKYNIILLCILMLYPLVVLWFLIFIAFKKIIIIVTIGTLI
NFFTKCCSLKDICRLGAFSSAPAILIAIMIIAFNPKYLWISDYVQLWCNFIAISSLVKSEKTTV
>Mature_304_residues
MIDFGIKLYLINYCLMITNFISNIINPIKLIIYNLYMAVWSLDFYNDIRKRYIGYGFRYITAIVCLGAIAWLFAKLSMFK
DVNDYLTRNKLESQTGLIIDNILSKWPEIYYDNQQISLLEPTPYLITDDNHTILIAIDPESKITGAEISNILIVMAKDNI
QIVDHATGRTTKIFYNSILGNKKLLIDSSYIKNLLTEVLQKKYNIILLCILMLYPLVVLWFLIFIAFKKIIIIVTIGTLI
NFFTKCCSLKDICRLGAFSSAPAILIAIMIIAFNPKYLWISDYVQLWCNFIAISSLVKSEKTTV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35004; Mature: 35004

Theoretical pI: Translated: 8.75; Mature: 8.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDFGIKLYLINYCLMITNFISNIINPIKLIIYNLYMAVWSLDFYNDIRKRYIGYGFRYI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TAIVCLGAIAWLFAKLSMFKDVNDYLTRNKLESQTGLIIDNILSKWPEIYYDNQQISLLE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHEECCCEEEEEC
PTPYLITDDNHTILIAIDPESKITGAEISNILIVMAKDNIQIVDHATGRTTKIFYNSILG
CCCEEEECCCCEEEEEECCCCCCCCCCCCCEEEEEECCCEEEEECCCCCCHHHHHHHHCC
NKKLLIDSSYIKNLLTEVLQKKYNIILLCILMLYPLVVLWFLIFIAFKKIIIIVTIGTLI
CCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NFFTKCCSLKDICRLGAFSSAPAILIAIMIIAFNPKYLWISDYVQLWCNFIAISSLVKSE
HHHHHHHCHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHC
KTTV
CCCC
>Mature Secondary Structure
MIDFGIKLYLINYCLMITNFISNIINPIKLIIYNLYMAVWSLDFYNDIRKRYIGYGFRYI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TAIVCLGAIAWLFAKLSMFKDVNDYLTRNKLESQTGLIIDNILSKWPEIYYDNQQISLLE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHEECCCEEEEEC
PTPYLITDDNHTILIAIDPESKITGAEISNILIVMAKDNIQIVDHATGRTTKIFYNSILG
CCCEEEECCCCEEEEEECCCCCCCCCCCCCEEEEEECCCEEEEECCCCCCHHHHHHHHCC
NKKLLIDSSYIKNLLTEVLQKKYNIILLCILMLYPLVVLWFLIFIAFKKIIIIVTIGTLI
CCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NFFTKCCSLKDICRLGAFSSAPAILIAIMIIAFNPKYLWISDYVQLWCNFIAISSLVKSE
HHHHHHHCHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHC
KTTV
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]