| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189184306
Identifier: 189184306
GI number: 189184306
Start: 1432694
End: 1433068
Strand: Reverse
Name: 189184306
Synonym: OTT_1399
Alternate gene names: NA
Gene position: 1433068-1432694 (Counterclockwise)
Preceding gene: 189184307
Following gene: 189184305
Centisome position: 71.33
GC content: 27.2
Gene sequence:
>375_bases GTGGTAGACAAGAAAACGCACCAAGTAATATGCACAGATTTTTCTAACGGTAAAAAACATGACTTTAGATTATTTAAGAA ATCCAAAATTCTTATCAATCCTAAGGTTAAAGTGATTACTGATACAGGATATCAAGGTATACAAAAAATTCACAATAATT CTGAATTACCAAATAAAAAAAACAAGAAAAATCCTTTAACTAAAAATGATAAAAAGAATAATCGTAGATTAGAAGAAGAA AGAGTTGTCAATGAAAAAGTTATTGGTATGCTAAAACGGTTCAAAATTATTGCTGACAAATATCGAAATAGACGTAAAAG ATTCGATCATAGATTTAATTTGATCTCTGGCATTTATAATTTTGGTCTACCTTAA
Upstream 100 bases:
>100_bases GTCTTGATTGATGCTACTGAGAGGCCTATAGAAAGACCTAAAAAAACAAAAATTCTATTATTCAGGAAAGAAGAAAAGGC ATACACTAAAAACTCAAATA
Downstream 100 bases:
>100_bases CCAGTTTCGAAAGAGATCTAATAGAAAAATTAAAACAGTATCCATATTCATCAGAAAGTGATTGTGTACTTTCTGGCAAA AGAGGAAATAGTAGATTTAA
Product: transposase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 124; Mature: 124
Protein sequence:
>124_residues MVDKKTHQVICTDFSNGKKHDFRLFKKSKILINPKVKVITDTGYQGIQKIHNNSELPNKKNKKNPLTKNDKKNNRRLEEE RVVNEKVIGMLKRFKIIADKYRNRRKRFDHRFNLISGIYNFGLP
Sequences:
>Translated_124_residues MVDKKTHQVICTDFSNGKKHDFRLFKKSKILINPKVKVITDTGYQGIQKIHNNSELPNKKNKKNPLTKNDKKNNRRLEEE RVVNEKVIGMLKRFKIIADKYRNRRKRFDHRFNLISGIYNFGLP >Mature_124_residues MVDKKTHQVICTDFSNGKKHDFRLFKKSKILINPKVKVITDTGYQGIQKIHNNSELPNKKNKKNPLTKNDKKNNRRLEEE RVVNEKVIGMLKRFKIIADKYRNRRKRFDHRFNLISGIYNFGLP
Specific function: Involved in the transposition of the insertion sequence [H]
COG id: COG3293
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase 11 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002559 [H]
Pfam domain/function: PF01609 Transposase_11 [H]
EC number: NA
Molecular weight: Translated: 14767; Mature: 14767
Theoretical pI: Translated: 11.12; Mature: 11.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVDKKTHQVICTDFSNGKKHDFRLFKKSKILINPKVKVITDTGYQGIQKIHNNSELPNKK CCCCCCCEEEEECCCCCCCHHHHHHHCCEEEECCCEEEEECCCHHHHHHHHCCCCCCCCC NKKNPLTKNDKKNNRRLEEERVVNEKVIGMLKRFKIIADKYRNRRKRFDHRFNLISGIYN CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FGLP CCCC >Mature Secondary Structure MVDKKTHQVICTDFSNGKKHDFRLFKKSKILINPKVKVITDTGYQGIQKIHNNSELPNKK CCCCCCCEEEEECCCCCCCHHHHHHHCCEEEECCCEEEEECCCHHHHHHHHCCCCCCCCC NKKNPLTKNDKKNNRRLEEERVVNEKVIGMLKRFKIIADKYRNRRKRFDHRFNLISGIYN CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FGLP CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1662761 [H]