Definition Orientia tsutsugamushi str. Ikeda, complete genome.
Accession NC_010793
Length 2,008,987

Click here to switch to the map view.

The map label for this gene is 189184306

Identifier: 189184306

GI number: 189184306

Start: 1432694

End: 1433068

Strand: Reverse

Name: 189184306

Synonym: OTT_1399

Alternate gene names: NA

Gene position: 1433068-1432694 (Counterclockwise)

Preceding gene: 189184307

Following gene: 189184305

Centisome position: 71.33

GC content: 27.2

Gene sequence:

>375_bases
GTGGTAGACAAGAAAACGCACCAAGTAATATGCACAGATTTTTCTAACGGTAAAAAACATGACTTTAGATTATTTAAGAA
ATCCAAAATTCTTATCAATCCTAAGGTTAAAGTGATTACTGATACAGGATATCAAGGTATACAAAAAATTCACAATAATT
CTGAATTACCAAATAAAAAAAACAAGAAAAATCCTTTAACTAAAAATGATAAAAAGAATAATCGTAGATTAGAAGAAGAA
AGAGTTGTCAATGAAAAAGTTATTGGTATGCTAAAACGGTTCAAAATTATTGCTGACAAATATCGAAATAGACGTAAAAG
ATTCGATCATAGATTTAATTTGATCTCTGGCATTTATAATTTTGGTCTACCTTAA

Upstream 100 bases:

>100_bases
GTCTTGATTGATGCTACTGAGAGGCCTATAGAAAGACCTAAAAAAACAAAAATTCTATTATTCAGGAAAGAAGAAAAGGC
ATACACTAAAAACTCAAATA

Downstream 100 bases:

>100_bases
CCAGTTTCGAAAGAGATCTAATAGAAAAATTAAAACAGTATCCATATTCATCAGAAAGTGATTGTGTACTTTCTGGCAAA
AGAGGAAATAGTAGATTTAA

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 124; Mature: 124

Protein sequence:

>124_residues
MVDKKTHQVICTDFSNGKKHDFRLFKKSKILINPKVKVITDTGYQGIQKIHNNSELPNKKNKKNPLTKNDKKNNRRLEEE
RVVNEKVIGMLKRFKIIADKYRNRRKRFDHRFNLISGIYNFGLP

Sequences:

>Translated_124_residues
MVDKKTHQVICTDFSNGKKHDFRLFKKSKILINPKVKVITDTGYQGIQKIHNNSELPNKKNKKNPLTKNDKKNNRRLEEE
RVVNEKVIGMLKRFKIIADKYRNRRKRFDHRFNLISGIYNFGLP
>Mature_124_residues
MVDKKTHQVICTDFSNGKKHDFRLFKKSKILINPKVKVITDTGYQGIQKIHNNSELPNKKNKKNPLTKNDKKNNRRLEEE
RVVNEKVIGMLKRFKIIADKYRNRRKRFDHRFNLISGIYNFGLP

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: COG3293

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 11 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002559 [H]

Pfam domain/function: PF01609 Transposase_11 [H]

EC number: NA

Molecular weight: Translated: 14767; Mature: 14767

Theoretical pI: Translated: 11.12; Mature: 11.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVDKKTHQVICTDFSNGKKHDFRLFKKSKILINPKVKVITDTGYQGIQKIHNNSELPNKK
CCCCCCCEEEEECCCCCCCHHHHHHHCCEEEECCCEEEEECCCHHHHHHHHCCCCCCCCC
NKKNPLTKNDKKNNRRLEEERVVNEKVIGMLKRFKIIADKYRNRRKRFDHRFNLISGIYN
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FGLP
CCCC
>Mature Secondary Structure
MVDKKTHQVICTDFSNGKKHDFRLFKKSKILINPKVKVITDTGYQGIQKIHNNSELPNKK
CCCCCCCEEEEECCCCCCCHHHHHHHCCEEEECCCEEEEECCCHHHHHHHHCCCCCCCCC
NKKNPLTKNDKKNNRRLEEERVVNEKVIGMLKRFKIIADKYRNRRKRFDHRFNLISGIYN
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FGLP
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1662761 [H]