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The map label for this gene is yebC [C]

Identifier: 189184285

GI number: 189184285

Start: 1402877

End: 1403626

Strand: Direct

Name: yebC [C]

Synonym: OTT_1378

Alternate gene names: 189184285

Gene position: 1402877-1403626 (Clockwise)

Preceding gene: 189184284

Following gene: 189184286

Centisome position: 69.83

GC content: 32.13

Gene sequence:

>750_bases
ATGGCAGGTCACTCAAAGTTTAAAAATATTCAGCATCGTAAGGGTGCACAGGATAAAAAGAAAGCTAAGCTATTTGCCAG
CTTAGTAAGAGAAATATCTCTTAGTGCTAAATCTGGAGCAGATATTCAATATAATCCTAGATTAAGAGCTGCTATTTCAG
CAGCTAAATTTAATAACTTGCCTAAAGATAGAATTGAAAAAGCTATTGCACATGCTAACAACAAAGATAATTATGAAAAT
TATTTTGAAATAACCTACGAAGGCATTATATTCGATGGAATTGCAATTATAGTTGAAGCTTTAACAGATAATACTAACCG
TACTGCAGCAAATGTTAGGGCTATTTTTAGTAAATACGGCGGTAATTTAGTCGGAACTGGTAATGCTAGCTTTTTATTTG
ATCGTTTAGGAATTATAAAGTTTGAATCAAAAGTTAGTACTAGCGAAGAGTTATTTGATGCTGCTATTGAACTTGGAGCA
GAAGATATTGAATTAGATGAAGAATATCATGTTGTATACACTCCAATTAAACTTTTTACTAATATCATAGAGGAACTAGC
GCAGCTATTTGGTTATCCAGTTGAATCATATATAGGCTGGAGACCTCGTAATACAGTTTTAATATCAGATACAGAAAAGG
CTCAAAAACTAATTAAGTTAGTTAATGCTTTAGATGACAATGATGATGTGCAGCGTTTTTTTGGCAACTATGAATTTTCT
GAGCAAATCTACAACAATTTACTTACCTAA

Upstream 100 bases:

>100_bases
TTTTAATGTACGATACATAATAAATTGTTATAGTTACAAGCATATTCTCAAGTTGGTTAAATAATATATTTTTAATGAGT
TTACTATTGTATTAATAATA

Downstream 100 bases:

>100_bases
AATGTTTTATTATGAAATAATAGAGTATGCTTTATAACAATAATAATTTATAGTAGTTTAAGTTACTATCAATATTTTTT
CAATAAACAAATGGAATTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 249; Mature: 248

Protein sequence:

>249_residues
MAGHSKFKNIQHRKGAQDKKKAKLFASLVREISLSAKSGADIQYNPRLRAAISAAKFNNLPKDRIEKAIAHANNKDNYEN
YFEITYEGIIFDGIAIIVEALTDNTNRTAANVRAIFSKYGGNLVGTGNASFLFDRLGIIKFESKVSTSEELFDAAIELGA
EDIELDEEYHVVYTPIKLFTNIIEELAQLFGYPVESYIGWRPRNTVLISDTEKAQKLIKLVNALDDNDDVQRFFGNYEFS
EQIYNNLLT

Sequences:

>Translated_249_residues
MAGHSKFKNIQHRKGAQDKKKAKLFASLVREISLSAKSGADIQYNPRLRAAISAAKFNNLPKDRIEKAIAHANNKDNYEN
YFEITYEGIIFDGIAIIVEALTDNTNRTAANVRAIFSKYGGNLVGTGNASFLFDRLGIIKFESKVSTSEELFDAAIELGA
EDIELDEEYHVVYTPIKLFTNIIEELAQLFGYPVESYIGWRPRNTVLISDTEKAQKLIKLVNALDDNDDVQRFFGNYEFS
EQIYNNLLT
>Mature_248_residues
AGHSKFKNIQHRKGAQDKKKAKLFASLVREISLSAKSGADIQYNPRLRAAISAAKFNNLPKDRIEKAIAHANNKDNYENY
FEITYEGIIFDGIAIIVEALTDNTNRTAANVRAIFSKYGGNLVGTGNASFLFDRLGIIKFESKVSTSEELFDAAIELGAE
DIELDEEYHVVYTPIKLFTNIIEELAQLFGYPVESYIGWRPRNTVLISDTEKAQKLIKLVNALDDNDDVQRFFGNYEFSE
QIYNNLLT

Specific function: Unknown

COG id: COG0217

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TACO1 family

Homologues:

Organism=Homo sapiens, GI27545315, Length=250, Percent_Identity=29.6, Blast_Score=94, Evalue=1e-19,
Organism=Escherichia coli, GI1788171, Length=249, Percent_Identity=40.1606425702811, Blast_Score=171, Evalue=3e-44,
Organism=Escherichia coli, GI1788294, Length=235, Percent_Identity=34.8936170212766, Blast_Score=105, Evalue=3e-24,
Organism=Caenorhabditis elegans, GI17556100, Length=244, Percent_Identity=26.2295081967213, Blast_Score=65, Evalue=3e-11,
Organism=Saccharomyces cerevisiae, GI6321458, Length=266, Percent_Identity=31.203007518797, Blast_Score=102, Evalue=4e-23,
Organism=Drosophila melanogaster, GI24583305, Length=229, Percent_Identity=30.1310043668122, Blast_Score=76, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1378_ORITI (B3CTY9)

Other databases:

- EMBL:   AP008981
- RefSeq:   YP_001938070.1
- GeneID:   6337890
- GenomeReviews:   AP008981_GR
- KEGG:   ott:OTT_1378
- HOGENOM:   HBG715231
- OMA:   VYANFDI
- ProtClustDB:   PRK00110
- HAMAP:   MF_00693
- InterPro:   IPR002876
- InterPro:   IPR017856
- Gene3D:   G3DSA:1.10.10.200
- PANTHER:   PTHR12532
- TIGRFAMs:   TIGR01033

Pfam domain/function: PF01709 DUF28; SSF75625 DUF28

EC number: NA

Molecular weight: Translated: 28103; Mature: 27972

Theoretical pI: Translated: 5.44; Mature: 5.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGHSKFKNIQHRKGAQDKKKAKLFASLVREISLSAKSGADIQYNPRLRAAISAAKFNNL
CCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEECCHHHHHHHHHHHCCC
PKDRIEKAIAHANNKDNYENYFEITYEGIIFDGIAIIVEALTDNTNRTAANVRAIFSKYG
CHHHHHHHHHHCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHC
GNLVGTGNASFLFDRLGIIKFESKVSTSEELFDAAIELGAEDIELDEEYHVVYTPIKLFT
CCEEECCCHHHHHHHHCCEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEHHHHHH
NIIEELAQLFGYPVESYIGWRPRNTVLISDTEKAQKLIKLVNALDDNDDVQRFFGNYEFS
HHHHHHHHHHCCCHHHHCCCCCCCEEEEECHHHHHHHHHHHHHCCCCHHHHHHHCCCCHH
EQIYNNLLT
HHHHHHHCC
>Mature Secondary Structure 
AGHSKFKNIQHRKGAQDKKKAKLFASLVREISLSAKSGADIQYNPRLRAAISAAKFNNL
CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEECCHHHHHHHHHHHCCC
PKDRIEKAIAHANNKDNYENYFEITYEGIIFDGIAIIVEALTDNTNRTAANVRAIFSKYG
CHHHHHHHHHHCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHC
GNLVGTGNASFLFDRLGIIKFESKVSTSEELFDAAIELGAEDIELDEEYHVVYTPIKLFT
CCEEECCCHHHHHHHHCCEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEHHHHHH
NIIEELAQLFGYPVESYIGWRPRNTVLISDTEKAQKLIKLVNALDDNDDVQRFFGNYEFS
HHHHHHHHHHCCCHHHHCCCCCCCEEEEECHHHHHHHHHHHHHCCCCHHHHHHHCCCCHH
EQIYNNLLT
HHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA