Definition Orientia tsutsugamushi str. Ikeda, complete genome.
Accession NC_010793
Length 2,008,987

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The map label for this gene is 189184201

Identifier: 189184201

GI number: 189184201

Start: 1312145

End: 1312684

Strand: Direct

Name: 189184201

Synonym: OTT_1294

Alternate gene names: NA

Gene position: 1312145-1312684 (Clockwise)

Preceding gene: 189184200

Following gene: 189184202

Centisome position: 65.31

GC content: 27.96

Gene sequence:

>540_bases
ATGAAAAAATGTATTATAACAGTTTGTCATAATAAACGTACCTCTAGCAATAGAGTTTTTAACAAAATTTCTAAAATTGC
TAAAAGTAGTTATGGCTGGTTCTTAGTCTTTAAGCTTCATCCTATAATCAATAATAAAGGCGAAATAATGTCAGTTAAAA
TTACTAAATGCAATAAAAGCGATCTATCTATAGCTTCAGTTATTTCTGAAGGCCTATCTGGTAAATTGTTTGGTGATAAA
GCTTACATATCTAAAGAGTTATTTCATCAACTGCTGACTAATGGTCTACGTTTATTTACTAATCTTCATAAAGATATGAA
AACATATTTATTAGACATAGATGATAAGCGTTTATTAAATAAACGTTCTTTAATTGAGTCTGTCTTTAATGTACTAAAAA
AACATATGCATTTAGATCATACTATGTACAGTTCTCTTATTAATTTCTTTGTTCATATAATTGCTTCTCTTGCTAGTTAT
TCTATCTCTAAACTTAATCCCCATCTTATCTCTTCTTCTTCTCCTGACTCCTTATCCTAA

Upstream 100 bases:

>100_bases
ATTAGGATAAGTGGAAATATGAAATGTAGAGAATAAGAGGTATACAAAGAGAGAATGTTGAGTTATAAAAAAAATTTAAA
TAAACAAGGAATAACACAAC

Downstream 100 bases:

>100_bases
ATTGACGTTTGAAAGCAATAACTTCAGATAGGCCATAGGCAATAATATGAAATTATCAGAAAAATGTAATACGTGAAACC
CATACGTTACGTTTGATGTA

Product: transposase

Products: NA

Alternate protein names: Transposase IS4 Family Protein; ISPg3 Transposase; Transposase IS4 Family; Transposase And Inactivated Derivative; IS4 Family Transposase; Membrane-Associated Metal-Dependent Hydrolase; Transposase IS

Number of amino acids: Translated: 179; Mature: 179

Protein sequence:

>179_residues
MKKCIITVCHNKRTSSNRVFNKISKIAKSSYGWFLVFKLHPIINNKGEIMSVKITKCNKSDLSIASVISEGLSGKLFGDK
AYISKELFHQLLTNGLRLFTNLHKDMKTYLLDIDDKRLLNKRSLIESVFNVLKKHMHLDHTMYSSLINFFVHIIASLASY
SISKLNPHLISSSSPDSLS

Sequences:

>Translated_179_residues
MKKCIITVCHNKRTSSNRVFNKISKIAKSSYGWFLVFKLHPIINNKGEIMSVKITKCNKSDLSIASVISEGLSGKLFGDK
AYISKELFHQLLTNGLRLFTNLHKDMKTYLLDIDDKRLLNKRSLIESVFNVLKKHMHLDHTMYSSLINFFVHIIASLASY
SISKLNPHLISSSSPDSLS
>Mature_179_residues
MKKCIITVCHNKRTSSNRVFNKISKIAKSSYGWFLVFKLHPIINNKGEIMSVKITKCNKSDLSIASVISEGLSGKLFGDK
AYISKELFHQLLTNGLRLFTNLHKDMKTYLLDIDDKRLLNKRSLIESVFNVLKKHMHLDHTMYSSLINFFVHIIASLASY
SISKLNPHLISSSSPDSLS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20345; Mature: 20345

Theoretical pI: Translated: 10.46; Mature: 10.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKCIITVCHNKRTSSNRVFNKISKIAKSSYGWFLVFKLHPIINNKGEIMSVKITKCNKS
CCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCCEEEEEEEECCCC
DLSIASVISEGLSGKLFGDKAYISKELFHQLLTNGLRLFTNLHKDMKTYLLDIDDKRLLN
CHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
KRSLIESVFNVLKKHMHLDHTMYSSLINFFVHIIASLASYSISKLNPHLISSSSPDSLS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCC
>Mature Secondary Structure
MKKCIITVCHNKRTSSNRVFNKISKIAKSSYGWFLVFKLHPIINNKGEIMSVKITKCNKS
CCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCCEEEEEEEECCCC
DLSIASVISEGLSGKLFGDKAYISKELFHQLLTNGLRLFTNLHKDMKTYLLDIDDKRLLN
CHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
KRSLIESVFNVLKKHMHLDHTMYSSLINFFVHIIASLASYSISKLNPHLISSSSPDSLS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA