| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189184198
Identifier: 189184198
GI number: 189184198
Start: 1309151
End: 1309633
Strand: Reverse
Name: 189184198
Synonym: OTT_1291
Alternate gene names: NA
Gene position: 1309633-1309151 (Counterclockwise)
Preceding gene: 189184199
Following gene: 189184197
Centisome position: 65.19
GC content: 31.68
Gene sequence:
>483_bases ATGGCTTATCAAATTTTGACTTCTTGTAGTTTTGGGCCAGCGGTTCGAACTAGGTTTTTTGTTAAGTTGCTTAAAAATAT CACACTAACAGAATGTGATAGATCAAAGATATTACAAGCTGTACAAGATGTATATGGATACGAAATTCAAGAATTACAAG TTACACCATTTGAGCAACTCAAAACTGTTTCACAGAAACAAATCAATGAAGAAGAGTATCTCTTGAATCTCAGTAAACAA CTGGGCTCTAACTCAACTTGGTACAAAGTACGAGAATCTTTGATTAAAAGTTACGGTCAAGCTATCGATAAATCATGGTT TAGTCCATTGAAAGTTGTAAATGAAGATAGTGTTAATAAAAAAATATTCATTAAAGCAAAAACAAAATTTGCAGATAGCT ATATCAAATCAAATTTTAAGCACATTCTAGAGCTTGCTTTTGAAGCTCAAGGGTTTTCGTTTGAATTAGTTCAGTGTAAG TAA
Upstream 100 bases:
>100_bases TTCTAAGGCAGATAGTATCAGTATGAAGATTTATATAGGTTTGGCATAACAATTTTTTTCAACCTATTTTCAACCTTTTG AACAAAAATTTGAAGCAGCT
Downstream 100 bases:
>100_bases ACTTAATGGTAATATGGAAGTTGCTGAATCTCATGAAATAATTGTTGCTAAACACCGTAATGGTCCGGTTGGTACAGTGA AGTTGCACTATAATAGTAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 160; Mature: 159
Protein sequence:
>160_residues MAYQILTSCSFGPAVRTRFFVKLLKNITLTECDRSKILQAVQDVYGYEIQELQVTPFEQLKTVSQKQINEEEYLLNLSKQ LGSNSTWYKVRESLIKSYGQAIDKSWFSPLKVVNEDSVNKKIFIKAKTKFADSYIKSNFKHILELAFEAQGFSFELVQCK
Sequences:
>Translated_160_residues MAYQILTSCSFGPAVRTRFFVKLLKNITLTECDRSKILQAVQDVYGYEIQELQVTPFEQLKTVSQKQINEEEYLLNLSKQ LGSNSTWYKVRESLIKSYGQAIDKSWFSPLKVVNEDSVNKKIFIKAKTKFADSYIKSNFKHILELAFEAQGFSFELVQCK >Mature_159_residues AYQILTSCSFGPAVRTRFFVKLLKNITLTECDRSKILQAVQDVYGYEIQELQVTPFEQLKTVSQKQINEEEYLLNLSKQL GSNSTWYKVRESLIKSYGQAIDKSWFSPLKVVNEDSVNKKIFIKAKTKFADSYIKSNFKHILELAFEAQGFSFELVQCK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18529; Mature: 18397
Theoretical pI: Translated: 9.31; Mature: 9.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAYQILTSCSFGPAVRTRFFVKLLKNITLTECDRSKILQAVQDVYGYEIQELQVTPFEQL CCCEEECCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCEEEEEECCCHHHH KTVSQKQINEEEYLLNLSKQLGSNSTWYKVRESLIKSYGQAIDKSWFSPLKVVNEDSVNK HHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC KIFIKAKTKFADSYIKSNFKHILELAFEAQGFSFELVQCK EEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEC >Mature Secondary Structure AYQILTSCSFGPAVRTRFFVKLLKNITLTECDRSKILQAVQDVYGYEIQELQVTPFEQL CCEEECCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCEEEEEECCCHHHH KTVSQKQINEEEYLLNLSKQLGSNSTWYKVRESLIKSYGQAIDKSWFSPLKVVNEDSVNK HHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC KIFIKAKTKFADSYIKSNFKHILELAFEAQGFSFELVQCK EEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA