Definition Orientia tsutsugamushi str. Ikeda, complete genome.
Accession NC_010793
Length 2,008,987

Click here to switch to the map view.

The map label for this gene is 189184195

Identifier: 189184195

GI number: 189184195

Start: 1307235

End: 1307513

Strand: Reverse

Name: 189184195

Synonym: OTT_1288

Alternate gene names: NA

Gene position: 1307513-1307235 (Counterclockwise)

Preceding gene: 189184196

Following gene: 189184194

Centisome position: 65.08

GC content: 30.47

Gene sequence:

>279_bases
ATGTCTATTGGAAACGAAGGTCAACAGAAAAATAAAAGTATATTTAATAAAAATATACAGTCAAAACTGTTACTAAGACA
TCTAGCTGCTGGTGATAAAGAGCTTTTAAAACTTACACATCAACTTAAAACACTAAACTTAAACATAATAGATGTATTCA
AACAGCTCAAAAGTGAGTCAGAAGATGTTAGAACACTTCAGTCCGAAATAATAGAAAATAAAAAATCAACATTAAGGGAA
GCCATATGTCATATGCCAATCAGCTTAGCTGACAGTTAG

Upstream 100 bases:

>100_bases
TTGATGATAATGAGCTGAAGATTAAACGAAATAAAGAGTTGAACTTTTTACTTTAATCTTCAGAAAGCATTTTTTTTTAA
AAAAATAGCAGGGGAATTCT

Downstream 100 bases:

>100_bases
CTAAGCTTGCTATTTTAAATTTCTAAAAAAACAAAGTTAATAAACTTAACCGTAGGAGAATAATGTGGAAAATAACCATA
TAGATTTGATTCAATATATT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 92; Mature: 91

Protein sequence:

>92_residues
MSIGNEGQQKNKSIFNKNIQSKLLLRHLAAGDKELLKLTHQLKTLNLNIIDVFKQLKSESEDVRTLQSEIIENKKSTLRE
AICHMPISLADS

Sequences:

>Translated_92_residues
MSIGNEGQQKNKSIFNKNIQSKLLLRHLAAGDKELLKLTHQLKTLNLNIIDVFKQLKSESEDVRTLQSEIIENKKSTLRE
AICHMPISLADS
>Mature_91_residues
SIGNEGQQKNKSIFNKNIQSKLLLRHLAAGDKELLKLTHQLKTLNLNIIDVFKQLKSESEDVRTLQSEIIENKKSTLREA
ICHMPISLADS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10441; Mature: 10310

Theoretical pI: Translated: 9.84; Mature: 9.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIGNEGQQKNKSIFNKNIQSKLLLRHLAAGDKELLKLTHQLKTLNLNIIDVFKQLKSES
CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCHHHHHHHHHHHCCH
EDVRTLQSEIIENKKSTLREAICHMPISLADS
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
SIGNEGQQKNKSIFNKNIQSKLLLRHLAAGDKELLKLTHQLKTLNLNIIDVFKQLKSES
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCHHHHHHHHHHHCCH
EDVRTLQSEIIENKKSTLREAICHMPISLADS
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA