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The map label for this gene is traH [H]

Identifier: 189184182

GI number: 189184182

Start: 1299891

End: 1300784

Strand: Direct

Name: traH [H]

Synonym: OTT_1275

Alternate gene names: 189184182

Gene position: 1299891-1300784 (Clockwise)

Preceding gene: 189184181

Following gene: 189184183

Centisome position: 64.7

GC content: 37.02

Gene sequence:

>894_bases
ATGAGCATCAAAATCAGAGTTTATGTTATTGCAGCATTATTTTCGCTACAAGCTCCAGTATCACTAGCTTGGAATATCGA
AAACGTATTTCAAGGAATGAGTGTTAATGTCACAAGATCTGAATCATATCAGAATCAAGCGGCTGGATATTATGCGGCTG
GCGGATTATCTGCCAGAACAAGCCAAACATCATTTCAGCCATTTGCTATAACTCTACCATCTTTAAACATGAGCTGTAGC
GGTATTGACGCCTATCTTGGTAGCTTCTCTGTTATTTCTGGAGAAGAATTAGTTCAATTAATGAAAAACATTGGTTCTCA
AGCTAAAGTTTATGCATTTTCATTAGGATTAAAAACATTTGCTCCACAGATCGAAAATGCTCTTAAGGACTTACGTAATC
TAGCAATGGAGATGAATCAATTTGCCAAAGGAGATTGCGAATTAACAAAAGCATTATTTGCTACAGCTTTACCAAAGAAC
TGGGCTATGAGAGAAGCTGTTTGCCGTGATATACAGTCACAAAGTGGATTTGATTATTTTGCAGCTGGTAAAAAATGTCG
TAATTATTTAGATCAAAAACAAGCTCTGCGACAAGCACAAAATAAGGATTCAGAGTTAATGCTTGATGATTATAACATCT
TCACTAAAGCAGCAGCAAAGGTTGGAATACCATCAGATATGCGTGATTCAATCATGTCTATGACTGGCACTATCGTGGTT
ACAAACAATAATGTACACTTTTATGACTCCTTAGCTCAGGACGAAAAAAGTTGGATTAGTCATTTAAAAGGCGGAGAATC
AGCCTCGATTTACAGCTGTGATAGTGTCAGTTGCTTGCATTCAACGCTTGCAACAAAATATCACAATATTACCAGAGCAG
TCTTATGCAGGTAA

Upstream 100 bases:

>100_bases
GTAAGAAAATATATTCAGTAGCTAGAGGCATAATCTCTGAGAATAAAATTATCGACAATATTCTAGCAATCGATAGATAT
TATCATAAATTGGAGACTAG

Downstream 100 bases:

>100_bases
AGCTAAACAACAATTGACTAATCTAAAAAATAAGTTTGATCATAATACTGAATTTAGTAACCATGAAATAGCCTTTTTAT
CTTCGATTGGAGATATATTT

Product: putative conjugative transfer protein TraH

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 297; Mature: 296

Protein sequence:

>297_residues
MSIKIRVYVIAALFSLQAPVSLAWNIENVFQGMSVNVTRSESYQNQAAGYYAAGGLSARTSQTSFQPFAITLPSLNMSCS
GIDAYLGSFSVISGEELVQLMKNIGSQAKVYAFSLGLKTFAPQIENALKDLRNLAMEMNQFAKGDCELTKALFATALPKN
WAMREAVCRDIQSQSGFDYFAAGKKCRNYLDQKQALRQAQNKDSELMLDDYNIFTKAAAKVGIPSDMRDSIMSMTGTIVV
TNNNVHFYDSLAQDEKSWISHLKGGESASIYSCDSVSCLHSTLATKYHNITRAVLCR

Sequences:

>Translated_297_residues
MSIKIRVYVIAALFSLQAPVSLAWNIENVFQGMSVNVTRSESYQNQAAGYYAAGGLSARTSQTSFQPFAITLPSLNMSCS
GIDAYLGSFSVISGEELVQLMKNIGSQAKVYAFSLGLKTFAPQIENALKDLRNLAMEMNQFAKGDCELTKALFATALPKN
WAMREAVCRDIQSQSGFDYFAAGKKCRNYLDQKQALRQAQNKDSELMLDDYNIFTKAAAKVGIPSDMRDSIMSMTGTIVV
TNNNVHFYDSLAQDEKSWISHLKGGESASIYSCDSVSCLHSTLATKYHNITRAVLCR
>Mature_296_residues
SIKIRVYVIAALFSLQAPVSLAWNIENVFQGMSVNVTRSESYQNQAAGYYAAGGLSARTSQTSFQPFAITLPSLNMSCSG
IDAYLGSFSVISGEELVQLMKNIGSQAKVYAFSLGLKTFAPQIENALKDLRNLAMEMNQFAKGDCELTKALFATALPKNW
AMREAVCRDIQSQSGFDYFAAGKKCRNYLDQKQALRQAQNKDSELMLDDYNIFTKAAAKVGIPSDMRDSIMSMTGTIVVT
NNNVHFYDSLAQDEKSWISHLKGGESASIYSCDSVSCLHSTLATKYHNITRAVLCR

Specific function: Involved in pilus assembly [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010927 [H]

Pfam domain/function: PF06122 TraH [H]

EC number: NA

Molecular weight: Translated: 32704; Mature: 32572

Theoretical pI: Translated: 8.26; Mature: 8.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIKIRVYVIAALFSLQAPVSLAWNIENVFQGMSVNVTRSESYQNQAAGYYAAGGLSART
CCEEEEHHHHHHHHHHCCCCCEEECHHHHHCCCEEEEECCCCHHHHCCCEEECCCCCCCC
SQTSFQPFAITLPSLNMSCSGIDAYLGSFSVISGEELVQLMKNIGSQAKVYAFSLGLKTF
CCCCCCCEEEEECCCCCCCCHHHHHHCCCCEECHHHHHHHHHHCCCCCEEEEEEHHHHHH
APQIENALKDLRNLAMEMNQFAKGDCELTKALFATALPKNWAMREAVCRDIQSQSGFDYF
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHH
AAGKKCRNYLDQKQALRQAQNKDSELMLDDYNIFTKAAAKVGIPSDMRDSIMSMTGTIVV
HCCHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHCCCCHHHHHHHHHHCCEEEE
TNNNVHFYDSLAQDEKSWISHLKGGESASIYSCDSVSCLHSTLATKYHNITRAVLCR
ECCCEEEEHHHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SIKIRVYVIAALFSLQAPVSLAWNIENVFQGMSVNVTRSESYQNQAAGYYAAGGLSART
CEEEEHHHHHHHHHHCCCCCEEECHHHHHCCCEEEEECCCCHHHHCCCEEECCCCCCCC
SQTSFQPFAITLPSLNMSCSGIDAYLGSFSVISGEELVQLMKNIGSQAKVYAFSLGLKTF
CCCCCCCEEEEECCCCCCCCHHHHHHCCCCEECHHHHHHHHHHCCCCCEEEEEEHHHHHH
APQIENALKDLRNLAMEMNQFAKGDCELTKALFATALPKNWAMREAVCRDIQSQSGFDYF
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHH
AAGKKCRNYLDQKQALRQAQNKDSELMLDDYNIFTKAAAKVGIPSDMRDSIMSMTGTIVV
HCCHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHCCCCHHHHHHHHHHCCEEEE
TNNNVHFYDSLAQDEKSWISHLKGGESASIYSCDSVSCLHSTLATKYHNITRAVLCR
ECCCEEEEHHHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1348105; 7915817; 2656408 [H]