Click here to switch to the map view.

The map label for this gene is 189184135

Identifier: 189184135

GI number: 189184135

Start: 1261999

End: 1262265

Strand: Direct

Name: 189184135

Synonym: OTT_1228

Alternate gene names: NA

Gene position: 1261999-1262265 (Clockwise)

Preceding gene: 189184132

Following gene: 189184137

Centisome position: 62.82

GC content: 36.33

Gene sequence:

>267_bases
TTGAACCAGCTATCTTTACATCCAAATGTTCAGGATCATTGTACTACAATCGGTAAAGATATTTTTGATAAAGAACAGCA
AAATAAAGCTGCTGTGATTTTAAAATTTGCTTCTGAACCAAACGAAAACACTAAGCGCTACATTCGCCTTCATGGCTTAA
AATGGAATAGCTTTCGTCAAGAATGGGGCGGCCATGTTAAGGACATTGAGGCCTTATTAAAGAATTGCCTTCTCAATGTT
CAGTATAGTATAGAACTTGTAGTGTGA

Upstream 100 bases:

>100_bases
AGATAATAAAACATTATTTTTTACTGCTATCTATTAACTCACTTTTTGTAAAAAGTGTTAGTCATAGAACTTAGAGTTCA
AAAAATAATGCTACTTTTTT

Downstream 100 bases:

>100_bases
TATAAAGCATCTAATAGAAGTAGCATACAACACATCAAAGGTAAGATTTTGTGTTGTATATTCATTAGACTTCTTTTGAA
ACTAGAGAATGATATAGAAT

Product: putative conjugative transfer protein TraD

Products: NA

Alternate protein names: Conjugative Transfer Protein

Number of amino acids: Translated: 88; Mature: 88

Protein sequence:

>88_residues
MNQLSLHPNVQDHCTTIGKDIFDKEQQNKAAVILKFASEPNENTKRYIRLHGLKWNSFRQEWGGHVKDIEALLKNCLLNV
QYSIELVV

Sequences:

>Translated_88_residues
MNQLSLHPNVQDHCTTIGKDIFDKEQQNKAAVILKFASEPNENTKRYIRLHGLKWNSFRQEWGGHVKDIEALLKNCLLNV
QYSIELVV
>Mature_88_residues
MNQLSLHPNVQDHCTTIGKDIFDKEQQNKAAVILKFASEPNENTKRYIRLHGLKWNSFRQEWGGHVKDIEALLKNCLLNV
QYSIELVV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10219; Mature: 10219

Theoretical pI: Translated: 8.25; Mature: 8.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQLSLHPNVQDHCTTIGKDIFDKEQQNKAAVILKFASEPNENTKRYIRLHGLKWNSFRQ
CCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCEEEEEEECCCCHHHHH
EWGGHVKDIEALLKNCLLNVQYSIELVV
HHCCCHHHHHHHHHHHHCCCEEEEEEEC
>Mature Secondary Structure
MNQLSLHPNVQDHCTTIGKDIFDKEQQNKAAVILKFASEPNENTKRYIRLHGLKWNSFRQ
CCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCEEEEEEECCCCHHHHH
EWGGHVKDIEALLKNCLLNVQYSIELVV
HHCCCHHHHHHHHHHHHCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA