| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189184123
Identifier: 189184123
GI number: 189184123
Start: 1248560
End: 1248736
Strand: Reverse
Name: 189184123
Synonym: OTT_1216
Alternate gene names: NA
Gene position: 1248736-1248560 (Counterclockwise)
Preceding gene: 189184124
Following gene: 189184113
Centisome position: 62.16
GC content: 32.2
Gene sequence:
>177_bases ATGCATGCTAAATTAGGCCTAGTATTTATGGTTAGAGGAATTGCTCTATGTTATTGCTTTAAGAAATTTAAGAATGTATC GGAGAATTTTTTGCTAAAAAGTTTTTTAGTAGCTAAAGTGGTATTGCCAGCTTCATTAGGATATCCAAGGCTTTTAGGCA AAAAAGTCGGCAAATAA
Upstream 100 bases:
>100_bases TTATCGAGGTCATTGAAGTATATGGGTTTTAGCATTGATGAGATGAATGGGGAGTAGTGCTAGCTGGAGTAGCTCCAGGA ATTGTACTACTAAACACAGC
Downstream 100 bases:
>100_bases TGAATCATCTCTTTAAGTAAAATGCTATACAAGAGCTGGTTAAATATAATAAATGCTTACTTTCAGTAACTATATTGCTA GCTGCAGCTAATGTAATTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 58; Mature: 58
Protein sequence:
>58_residues MHAKLGLVFMVRGIALCYCFKKFKNVSENFLLKSFLVAKVVLPASLGYPRLLGKKVGK
Sequences:
>Translated_58_residues MHAKLGLVFMVRGIALCYCFKKFKNVSENFLLKSFLVAKVVLPASLGYPRLLGKKVGK >Mature_58_residues MHAKLGLVFMVRGIALCYCFKKFKNVSENFLLKSFLVAKVVLPASLGYPRLLGKKVGK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6473; Mature: 6473
Theoretical pI: Translated: 10.94; Mature: 10.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 6.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHAKLGLVFMVRGIALCYCFKKFKNVSENFLLKSFLVAKVVLPASLGYPRLLGKKVGK CCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCC >Mature Secondary Structure MHAKLGLVFMVRGIALCYCFKKFKNVSENFLLKSFLVAKVVLPASLGYPRLLGKKVGK CCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA