| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
Click here to switch to the map view.
The map label for this gene is fusA [H]
Identifier: 189184093
GI number: 189184093
Start: 1208862
End: 1210982
Strand: Direct
Name: fusA [H]
Synonym: OTT_1186
Alternate gene names: 189184093
Gene position: 1208862-1210982 (Clockwise)
Preceding gene: 189184092
Following gene: 189184094
Centisome position: 60.17
GC content: 34.98
Gene sequence:
>2121_bases ATGTCAGAAAATCATAAGTTATCTTACGTAAGAAATATTGGAATTGGCGCACACATCGATGCTGGAAAAACAACAACTAC TGAGCGAATTTTATATTATACTGGGGTTTCATATAGCATAGGAGAAGTTCATGATGGTACTACTGTCATGGACTATATGA AGCAAGAAAGGGATAGAGGAATTACGATACAATCTGCTGCAACAACTTGTCATTGGATAAAAAAAGATGATTGTGCAGAA CAAGCAAGTCAAAAAGAACAAGAATATAAAATTAATATTATTGATACTCCTGGACACGTAGATTTTACTATTGAAGTAGG GCGTGCGTTGCGTGTGCTAGATGGCATGATTGCTGTGTTTGATGGTGTAGCAGGAGTAGAACCTCAATCTGAGACTGTAT GGCGTCAAGCAGATAAATATGCTGTTCCTAGAATCTGCTTTGTAAATAAGATGGATAGAATGGGAGCAGATTTTTTTCGA TGCGTTCAGATGATGAAGGATCGTCTAGGTACTAAGCCATTAGTGATACAGTTACCTATTGGAATTGAAGACACTTTTAA GGGTGTAATTGATTTAGTAAAAATGAAAGCTATAGTTTGGAGTAATGAGGATCTAGGAGCAAAATATGAGTACCATAGTA TTCCTAATAATATGCAGGCTATGGTAGAAGATTATAGACATCAATTGTTAGAAACAGTAGTGGAAGTTGATGAAGAAATA TTTAATTCTTATGTTTCAAATGAAGATTTGTCTGAAGAAGATATTAGAAAATGTATTAGAAAAGGTGCAATCTCTGGATT GTTTGTTCCTGTACTTTGTGGTAGCGCGTTTAAGAATAAGGGTGTTCAGACTTTACTAGATGCAGTAGTAGATTATCTAC CTTCTCCTAACGATGTGAATAGTATTAAAGCTGTTGATGTTAAAACAGAACAAGAAATTAGTAGAAAAGTAAGTGTCGAT GAACAATTTTCTGCATTAGCTTTTAAGGTCATTAATGATCCTTTTGTAGGATCATTAACGTTTATTCGAATATATTCAGG AAAGTTGCAAACAGGAAGCACTGTTATTAATACTACTAAAAATCAGAAAGAGCGTATCAGCCGTATGCTATTGATGCATG CCAATAATCGCAAAGATATTAAGGAAGCTGTAGCAGGAGATATAGTTGCACTAACTGGTCTAAAAAGCACAACCACTGGA GATACTATTTGTTCTTTAGATAGTCAAATTATTTTAGAAAAAATAGAATTTCCTAAGCCTGTTATTGAGCTTGCTGTTGA ACCAAAAACTCCAGCAGATCAAGAAAAAATATCAGCCGCTTTAGTAAAATTAGCAGCTGAAGATCCTTCATTAGTTTTTA CTGTAGATTCTGAAACGAATCAAATGGTAATTAAAGGTATGGGGGAGCTACATCTTGAGATTATTATTGATCGTATGAAG GAGGAGTTTAAAGTTGAGGCTAATGTTGGAGCACCAAGAGTAGCATATAGAGAAACTATTACTCAATCTTATACAGTGGA TTACACACATAAAAAGCAAACTGGAGGCGCTGGCCAATTTGCGCGTGTCAAGATTATTTTTGAGCCTTTAGAGGCAGGGG CAGGATTTCAATTTGAAAGTAAGATTGTTGGAGGAGCTATTCCTAAGGAATTTATTCCTGGTGTAGAAAAAGGATTAGAA GAAATCAAAGAATCTGGTGTTGTAGCTGGTTATCCTACAATAGATTTTAAGGCTACATTAATTGATGGTAGTTTTCATGA GGTTGATTCTAGTGTATTAGCATTTGAAATTGCTGCAAAAAATGCATTTAAGGAAGGAATAACAAAAGCTGGCCCTAAGC TACTTGGCCCTATTATGAAAGTAGAAGTGATTTCTCCAAATGAATATATGGGAGACATTATTGGTGATCTTAATAGTAGA TCAGGCGTAATTCAAAGCATGGAGCCTAGAGGTAATACTCAAATTATTAATGCTTATGTACCGCTTGGACAGATGTTTGG ATATGTTAGTACTTTGAGATCTTTATCTCAAGGAAGAGCTCAATATAGCATGGTATTTTCTCACTATGAGCAAGTGTCTC GAAGTATAGCAGAAAAAATTCAGGCTAAAGATAAAAAATAA
Upstream 100 bases:
>100_bases TGGAGCAGTTAAGAAAAAGGATGATAATCATAAAATGGCAGAAGCTAACCAAGCATTTTCTCATTTAATCACTAAGAGGA GGTCAAGGGGTAATTAATTT
Downstream 100 bases:
>100_bases GATTGCTGAATAGCTCAATAGCTTTATTTTTTGAATTTTTTTAATTGGATGTAGTAGTTAACATGAAATTGCAATTATTC TATAAATGTCTTAGTGTTAT
Product: elongation factor G
Products: GDP; phosphate
Alternate protein names: EF-G [H]
Number of amino acids: Translated: 706; Mature: 705
Protein sequence:
>706_residues MSENHKLSYVRNIGIGAHIDAGKTTTTERILYYTGVSYSIGEVHDGTTVMDYMKQERDRGITIQSAATTCHWIKKDDCAE QASQKEQEYKINIIDTPGHVDFTIEVGRALRVLDGMIAVFDGVAGVEPQSETVWRQADKYAVPRICFVNKMDRMGADFFR CVQMMKDRLGTKPLVIQLPIGIEDTFKGVIDLVKMKAIVWSNEDLGAKYEYHSIPNNMQAMVEDYRHQLLETVVEVDEEI FNSYVSNEDLSEEDIRKCIRKGAISGLFVPVLCGSAFKNKGVQTLLDAVVDYLPSPNDVNSIKAVDVKTEQEISRKVSVD EQFSALAFKVINDPFVGSLTFIRIYSGKLQTGSTVINTTKNQKERISRMLLMHANNRKDIKEAVAGDIVALTGLKSTTTG DTICSLDSQIILEKIEFPKPVIELAVEPKTPADQEKISAALVKLAAEDPSLVFTVDSETNQMVIKGMGELHLEIIIDRMK EEFKVEANVGAPRVAYRETITQSYTVDYTHKKQTGGAGQFARVKIIFEPLEAGAGFQFESKIVGGAIPKEFIPGVEKGLE EIKESGVVAGYPTIDFKATLIDGSFHEVDSSVLAFEIAAKNAFKEGITKAGPKLLGPIMKVEVISPNEYMGDIIGDLNSR SGVIQSMEPRGNTQIINAYVPLGQMFGYVSTLRSLSQGRAQYSMVFSHYEQVSRSIAEKIQAKDKK
Sequences:
>Translated_706_residues MSENHKLSYVRNIGIGAHIDAGKTTTTERILYYTGVSYSIGEVHDGTTVMDYMKQERDRGITIQSAATTCHWIKKDDCAE QASQKEQEYKINIIDTPGHVDFTIEVGRALRVLDGMIAVFDGVAGVEPQSETVWRQADKYAVPRICFVNKMDRMGADFFR CVQMMKDRLGTKPLVIQLPIGIEDTFKGVIDLVKMKAIVWSNEDLGAKYEYHSIPNNMQAMVEDYRHQLLETVVEVDEEI FNSYVSNEDLSEEDIRKCIRKGAISGLFVPVLCGSAFKNKGVQTLLDAVVDYLPSPNDVNSIKAVDVKTEQEISRKVSVD EQFSALAFKVINDPFVGSLTFIRIYSGKLQTGSTVINTTKNQKERISRMLLMHANNRKDIKEAVAGDIVALTGLKSTTTG DTICSLDSQIILEKIEFPKPVIELAVEPKTPADQEKISAALVKLAAEDPSLVFTVDSETNQMVIKGMGELHLEIIIDRMK EEFKVEANVGAPRVAYRETITQSYTVDYTHKKQTGGAGQFARVKIIFEPLEAGAGFQFESKIVGGAIPKEFIPGVEKGLE EIKESGVVAGYPTIDFKATLIDGSFHEVDSSVLAFEIAAKNAFKEGITKAGPKLLGPIMKVEVISPNEYMGDIIGDLNSR SGVIQSMEPRGNTQIINAYVPLGQMFGYVSTLRSLSQGRAQYSMVFSHYEQVSRSIAEKIQAKDKK >Mature_705_residues SENHKLSYVRNIGIGAHIDAGKTTTTERILYYTGVSYSIGEVHDGTTVMDYMKQERDRGITIQSAATTCHWIKKDDCAEQ ASQKEQEYKINIIDTPGHVDFTIEVGRALRVLDGMIAVFDGVAGVEPQSETVWRQADKYAVPRICFVNKMDRMGADFFRC VQMMKDRLGTKPLVIQLPIGIEDTFKGVIDLVKMKAIVWSNEDLGAKYEYHSIPNNMQAMVEDYRHQLLETVVEVDEEIF NSYVSNEDLSEEDIRKCIRKGAISGLFVPVLCGSAFKNKGVQTLLDAVVDYLPSPNDVNSIKAVDVKTEQEISRKVSVDE QFSALAFKVINDPFVGSLTFIRIYSGKLQTGSTVINTTKNQKERISRMLLMHANNRKDIKEAVAGDIVALTGLKSTTTGD TICSLDSQIILEKIEFPKPVIELAVEPKTPADQEKISAALVKLAAEDPSLVFTVDSETNQMVIKGMGELHLEIIIDRMKE EFKVEANVGAPRVAYRETITQSYTVDYTHKKQTGGAGQFARVKIIFEPLEAGAGFQFESKIVGGAIPKEFIPGVEKGLEE IKESGVVAGYPTIDFKATLIDGSFHEVDSSVLAFEIAAKNAFKEGITKAGPKLLGPIMKVEVISPNEYMGDIIGDLNSRS GVIQSMEPRGNTQIINAYVPLGQMFGYVSTLRSLSQGRAQYSMVFSHYEQVSRSIAEKIQAKDKK
Specific function: Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and
COG id: COG0480
COG function: function code J; Translation elongation factors (GTPases)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP-binding elongation factor family. EF-G/EF-2 subfamily [H]
Homologues:
Organism=Homo sapiens, GI18390331, Length=703, Percent_Identity=42.2475106685633, Blast_Score=539, Evalue=1e-153, Organism=Homo sapiens, GI19923640, Length=729, Percent_Identity=38.957475994513, Blast_Score=473, Evalue=1e-133, Organism=Homo sapiens, GI25306283, Length=469, Percent_Identity=43.9232409381663, Blast_Score=341, Evalue=1e-93, Organism=Homo sapiens, GI25306287, Length=307, Percent_Identity=50.4885993485342, Blast_Score=285, Evalue=1e-76, Organism=Homo sapiens, GI4503483, Length=410, Percent_Identity=27.3170731707317, Blast_Score=112, Evalue=9e-25, Organism=Homo sapiens, GI94966754, Length=145, Percent_Identity=38.6206896551724, Blast_Score=102, Evalue=9e-22, Organism=Homo sapiens, GI157426893, Length=148, Percent_Identity=33.7837837837838, Blast_Score=92, Evalue=2e-18, Organism=Homo sapiens, GI310132016, Length=128, Percent_Identity=38.28125, Blast_Score=86, Evalue=2e-16, Organism=Homo sapiens, GI310110807, Length=128, Percent_Identity=38.28125, Blast_Score=86, Evalue=2e-16, Organism=Homo sapiens, GI310123363, Length=128, Percent_Identity=38.28125, Blast_Score=86, Evalue=2e-16, Organism=Homo sapiens, GI94966752, Length=68, Percent_Identity=50, Blast_Score=74, Evalue=4e-13, Organism=Escherichia coli, GI1789738, Length=711, Percent_Identity=54.2897327707454, Blast_Score=780, Evalue=0.0, Organism=Escherichia coli, GI1790835, Length=496, Percent_Identity=26.4112903225806, Blast_Score=148, Evalue=1e-36, Organism=Escherichia coli, GI48994988, Length=147, Percent_Identity=38.0952380952381, Blast_Score=99, Evalue=1e-21, Organism=Escherichia coli, GI1788922, Length=161, Percent_Identity=36.0248447204969, Blast_Score=91, Evalue=2e-19, Organism=Caenorhabditis elegans, GI17533571, Length=708, Percent_Identity=39.5480225988701, Blast_Score=499, Evalue=1e-141, Organism=Caenorhabditis elegans, GI17556745, Length=729, Percent_Identity=27.4348422496571, Blast_Score=295, Evalue=5e-80, Organism=Caenorhabditis elegans, GI17506493, Length=409, Percent_Identity=28.6063569682152, Blast_Score=112, Evalue=5e-25, Organism=Caenorhabditis elegans, GI17557151, Length=149, Percent_Identity=36.241610738255, Blast_Score=88, Evalue=2e-17, Organism=Caenorhabditis elegans, GI71988819, Length=150, Percent_Identity=30, Blast_Score=72, Evalue=1e-12, Organism=Caenorhabditis elegans, GI71988811, Length=150, Percent_Identity=30, Blast_Score=72, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6323098, Length=710, Percent_Identity=40.2816901408451, Blast_Score=541, Evalue=1e-154, Organism=Saccharomyces cerevisiae, GI6322359, Length=811, Percent_Identity=33.4155363748459, Blast_Score=388, Evalue=1e-108, Organism=Saccharomyces cerevisiae, GI6324707, Length=412, Percent_Identity=25, Blast_Score=103, Evalue=1e-22, Organism=Saccharomyces cerevisiae, GI6320593, Length=412, Percent_Identity=25, Blast_Score=103, Evalue=1e-22, Organism=Saccharomyces cerevisiae, GI6323320, Length=163, Percent_Identity=34.3558282208589, Blast_Score=80, Evalue=8e-16, Organism=Saccharomyces cerevisiae, GI6324166, Length=150, Percent_Identity=35.3333333333333, Blast_Score=77, Evalue=9e-15, Organism=Drosophila melanogaster, GI24582462, Length=712, Percent_Identity=40.5898876404494, Blast_Score=541, Evalue=1e-154, Organism=Drosophila melanogaster, GI221458488, Length=738, Percent_Identity=34.2818428184282, Blast_Score=399, Evalue=1e-111, Organism=Drosophila melanogaster, GI21357743, Length=816, Percent_Identity=21.6911764705882, Blast_Score=119, Evalue=7e-27, Organism=Drosophila melanogaster, GI24585711, Length=413, Percent_Identity=26.634382566586, Blast_Score=108, Evalue=2e-23, Organism=Drosophila melanogaster, GI24585713, Length=413, Percent_Identity=26.634382566586, Blast_Score=108, Evalue=2e-23, Organism=Drosophila melanogaster, GI24585709, Length=413, Percent_Identity=26.634382566586, Blast_Score=108, Evalue=2e-23, Organism=Drosophila melanogaster, GI78706572, Length=190, Percent_Identity=32.6315789473684, Blast_Score=95, Evalue=2e-19, Organism=Drosophila melanogaster, GI28574573, Length=146, Percent_Identity=36.986301369863, Blast_Score=86, Evalue=8e-17,
Paralogues:
None
Copy number: 1080 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2520 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 7984 Molecules/Cell In: Growth Phase, Gl
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009022 - InterPro: IPR000795 - InterPro: IPR020568 - InterPro: IPR014721 - InterPro: IPR005225 - InterPro: IPR004540 - InterPro: IPR000640 - InterPro: IPR005517 - InterPro: IPR004161 - InterPro: IPR009000 [H]
Pfam domain/function: PF00679 EFG_C; PF03764 EFG_IV; PF00009 GTP_EFTU; PF03144 GTP_EFTU_D2 [H]
EC number: 3.6.5.3
Molecular weight: Translated: 78204; Mature: 78072
Theoretical pI: Translated: 5.40; Mature: 5.40
Prosite motif: PS00301 EFACTOR_GTP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSENHKLSYVRNIGIGAHIDAGKTTTTERILYYTGVSYSIGEVHDGTTVMDYMKQERDRG CCCCCCCHHEEECCCCCEECCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCC ITIQSAATTCHWIKKDDCAEQASQKEQEYKINIIDTPGHVDFTIEVGRALRVLDGMIAVF EEEEECCCHHHCCCCHHHHHHHHCCCCCEEEEEEECCCCEEEEEEHHHHHHHHHHHHHHH DGVAGVEPQSETVWRQADKYAVPRICFVNKMDRMGADFFRCVQMMKDRLGTKPLVIQLPI CCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCEEEEECC GIEDTFKGVIDLVKMKAIVWSNEDLGAKYEYHSIPNNMQAMVEDYRHQLLETVVEVDEEI CCCHHHHHHHHHHHHHHHEECCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH FNSYVSNEDLSEEDIRKCIRKGAISGLFVPVLCGSAFKNKGVQTLLDAVVDYLPSPNDVN HHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHHHCCHHHCCCHHHHHHHHHHHCCCCCCCC SIKAVDVKTEQEISRKVSVDEQFSALAFKVINDPFVGSLTFIRIYSGKLQTGSTVINTTK CEEEEECCCHHHHHHHCCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCEEEECCC NQKERISRMLLMHANNRKDIKEAVAGDIVALTGLKSTTTGDTICSLDSQIILEKIEFPKP CHHHHHHHHHHHHCCCHHHHHHHHCCCEEEEECCCCCCCCCHHHHCCHHHHHHHHCCCCC VIELAVEPKTPADQEKISAALVKLAAEDPSLVFTVDSETNQMVIKGMGELHLEIIIDRMK HHHEEECCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCEEEECCCCHHHHHHHHHHHH EEFKVEANVGAPRVAYRETITQSYTVDYTHKKQTGGAGQFARVKIIFEPLEAGAGFQFES HHHEEECCCCCCCHHHHHHHCCCEEEEECCCCCCCCCCCEEEEEEEEEECCCCCCCEECC KIVGGAIPKEFIPGVEKGLEEIKESGVVAGYPTIDFKATLIDGSFHEVDSSVLAFEIAAK CCCCCCCCHHHCCHHHHHHHHHHHCCCEECCCCCCEEEEEECCCHHHHCCHHHEEHHHHH NAFKEGITKAGPKLLGPIMKVEVISPNEYMGDIIGDLNSRSGVIQSMEPRGNTQIINAYV HHHHHHHHHCCHHHHCCCEEEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEC PLGQMFGYVSTLRSLSQGRAQYSMVFSHYEQVSRSIAEKIQAKDKK CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SENHKLSYVRNIGIGAHIDAGKTTTTERILYYTGVSYSIGEVHDGTTVMDYMKQERDRG CCCCCCHHEEECCCCCEECCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCC ITIQSAATTCHWIKKDDCAEQASQKEQEYKINIIDTPGHVDFTIEVGRALRVLDGMIAVF EEEEECCCHHHCCCCHHHHHHHHCCCCCEEEEEEECCCCEEEEEEHHHHHHHHHHHHHHH DGVAGVEPQSETVWRQADKYAVPRICFVNKMDRMGADFFRCVQMMKDRLGTKPLVIQLPI CCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCEEEEECC GIEDTFKGVIDLVKMKAIVWSNEDLGAKYEYHSIPNNMQAMVEDYRHQLLETVVEVDEEI CCCHHHHHHHHHHHHHHHEECCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH FNSYVSNEDLSEEDIRKCIRKGAISGLFVPVLCGSAFKNKGVQTLLDAVVDYLPSPNDVN HHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHHHCCHHHCCCHHHHHHHHHHHCCCCCCCC SIKAVDVKTEQEISRKVSVDEQFSALAFKVINDPFVGSLTFIRIYSGKLQTGSTVINTTK CEEEEECCCHHHHHHHCCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCEEEECCC NQKERISRMLLMHANNRKDIKEAVAGDIVALTGLKSTTTGDTICSLDSQIILEKIEFPKP CHHHHHHHHHHHHCCCHHHHHHHHCCCEEEEECCCCCCCCCHHHHCCHHHHHHHHCCCCC VIELAVEPKTPADQEKISAALVKLAAEDPSLVFTVDSETNQMVIKGMGELHLEIIIDRMK HHHEEECCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCEEEECCCCHHHHHHHHHHHH EEFKVEANVGAPRVAYRETITQSYTVDYTHKKQTGGAGQFARVKIIFEPLEAGAGFQFES HHHEEECCCCCCCHHHHHHHCCCEEEEECCCCCCCCCCCEEEEEEEEEECCCCCCCEECC KIVGGAIPKEFIPGVEKGLEEIKESGVVAGYPTIDFKATLIDGSFHEVDSSVLAFEIAAK CCCCCCCCHHHCCHHHHHHHHHHHCCCEECCCCCCEEEEEECCCHHHHCCHHHEEHHHHH NAFKEGITKAGPKLLGPIMKVEVISPNEYMGDIIGDLNSRSGVIQSMEPRGNTQIINAYV HHHHHHHHHCCHHHHCCCEEEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEC PLGQMFGYVSTLRSLSQGRAQYSMVFSHYEQVSRSIAEKIQAKDKK CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: GTP; H2O
Specific reaction: GTP + H2O = GDP + phosphate
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA