Definition Orientia tsutsugamushi str. Ikeda, complete genome.
Accession NC_010793
Length 2,008,987

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The map label for this gene is 189184063

Identifier: 189184063

GI number: 189184063

Start: 1184778

End: 1185104

Strand: Reverse

Name: 189184063

Synonym: OTT_1156

Alternate gene names: NA

Gene position: 1185104-1184778 (Counterclockwise)

Preceding gene: 189184064

Following gene: 189184062

Centisome position: 58.99

GC content: 31.19

Gene sequence:

>327_bases
GTGATGAAAGTCTTATTTACTACTTCTCCAAATGAGGTAGAAAGGCAAATAGCAGACATGAAAGTGGCATCTAGTAATAC
TGAATCTTTAAATAAATTTTTTCATGATCATTTGCAATTTGTTAAAGGTTCAAATGTATCTTCAGTCTTTTTTCCGAAGA
ATATTGAAGTAATAAAGGATGGAGTATTAATTAGTGGAACGCTTCGTTATTGGTTTAGCGATAGTAAACATATAGCTGTC
GATAAGACTTACTTTCTGACTTACAAACGAACTCCTAATTGCCTTTTATTGTTGACTGGTGTTAAAGAGAATGGAATAAA
AAAATGA

Upstream 100 bases:

>100_bases
AGAAAAGTGGTTATTAATTCCAGCAATAGAGCCTGATCGCAAAATGACGATATCGTCCAAAAATTATCATGAAACCTATT
TAAAGGAATAGGCAATTTTT

Downstream 100 bases:

>100_bases
GTATTAGAATTTTGAGATTTATCATAGGGTTTATTGCTTTGGTAAACGTTAATAATATATATGCAGTAGAATATGAGTTA
GAAGCTGACAATTTACTAAA

Product: putative conjugative transfer protein TraE

Products: NA

Alternate protein names: Conjugative Transfer Protein

Number of amino acids: Translated: 108; Mature: 108

Protein sequence:

>108_residues
MMKVLFTTSPNEVERQIADMKVASSNTESLNKFFHDHLQFVKGSNVSSVFFPKNIEVIKDGVLISGTLRYWFSDSKHIAV
DKTYFLTYKRTPNCLLLLTGVKENGIKK

Sequences:

>Translated_108_residues
MMKVLFTTSPNEVERQIADMKVASSNTESLNKFFHDHLQFVKGSNVSSVFFPKNIEVIKDGVLISGTLRYWFSDSKHIAV
DKTYFLTYKRTPNCLLLLTGVKENGIKK
>Mature_108_residues
MMKVLFTTSPNEVERQIADMKVASSNTESLNKFFHDHLQFVKGSNVSSVFFPKNIEVIKDGVLISGTLRYWFSDSKHIAV
DKTYFLTYKRTPNCLLLLTGVKENGIKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12333; Mature: 12333

Theoretical pI: Translated: 10.02; Mature: 10.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKVLFTTSPNEVERQIADMKVASSNTESLNKFFHDHLQFVKGSNVSSVFFPKNIEVIKD
CEEEEEECCCHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCEEEEC
GVLISGTLRYWFSDSKHIAVDKTYFLTYKRTPNCLLLLTGVKENGIKK
CEEEEEEEEEEECCCCEEEEEEEEEEEEECCCCEEEEEECCCCCCCCC
>Mature Secondary Structure
MMKVLFTTSPNEVERQIADMKVASSNTESLNKFFHDHLQFVKGSNVSSVFFPKNIEVIKD
CEEEEEECCCHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCEEEEC
GVLISGTLRYWFSDSKHIAVDKTYFLTYKRTPNCLLLLTGVKENGIKK
CEEEEEEEEEEECCCCEEEEEEEEEEEEECCCCEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA