Click here to switch to the map view.

The map label for this gene is 189184049

Identifier: 189184049

GI number: 189184049

Start: 1175953

End: 1176432

Strand: Reverse

Name: 189184049

Synonym: OTT_1142

Alternate gene names: NA

Gene position: 1176432-1175953 (Counterclockwise)

Preceding gene: 189184050

Following gene: 189184048

Centisome position: 58.56

GC content: 32.71

Gene sequence:

>480_bases
ATGTCAGTTGCTTGCATTCAACGCTTGCGACGAAATATCACAATATCACCAGAGCAGTCTTATGCAGGTAAAGCTAAACA
ACAATTGACTAATCTAAAAAATAAGTTTGATTATAATACTGAATTTAGTAACCATGAAATAGCCTTTTTATCTTCGATTG
GAGATATATTTCCGATTTATGATTATATCATATTAGAATATATTTCTGGAGTCACAATTTTAGATAGCTCATCAGAATTA
ATAGCTAGCTATACATTAGTTCAGCATTTGAAGGAAGTGATCACAGAAATACGTAGAGCCGTTACTTCACTAGGTGCTAA
GCAAGTTTCGAATGAACATTTAGAAAGATATTTGAAGGAATTGAATCGAGTTCAACTGTTTGCAAATGAGAAATGGACTA
GCCTACAAACAGATGCAAATCGAATAGATAAAAGGGCTAGATTAATAGAGCAGCATTTAATAGCGAAGGAGAAAAGTTAA

Upstream 100 bases:

>100_bases
AACAATAATGTACACTTTTATGACTCCTTAGCTCAGGACGAAAAAAGTTGGATTAGTCATTTAAAAGGCGGAGAATCAGC
CTCGATTTACAGTTGTGATA

Downstream 100 bases:

>100_bases
TGGATTACGTAATATACACATTTGGTGGTGGAGACTTATTGTGGCATGTGTTTAACGGCATAGGAAGAGTCTTTGCTTCA
AATAGCGAATACTTCACTCC

Product: putative conjugative transfer protein TraH

Products: NA

Alternate protein names: Conjugative Transfer Protein TraH

Number of amino acids: Translated: 159; Mature: 158

Protein sequence:

>159_residues
MSVACIQRLRRNITISPEQSYAGKAKQQLTNLKNKFDYNTEFSNHEIAFLSSIGDIFPIYDYIILEYISGVTILDSSSEL
IASYTLVQHLKEVITEIRRAVTSLGAKQVSNEHLERYLKELNRVQLFANEKWTSLQTDANRIDKRARLIEQHLIAKEKS

Sequences:

>Translated_159_residues
MSVACIQRLRRNITISPEQSYAGKAKQQLTNLKNKFDYNTEFSNHEIAFLSSIGDIFPIYDYIILEYISGVTILDSSSEL
IASYTLVQHLKEVITEIRRAVTSLGAKQVSNEHLERYLKELNRVQLFANEKWTSLQTDANRIDKRARLIEQHLIAKEKS
>Mature_158_residues
SVACIQRLRRNITISPEQSYAGKAKQQLTNLKNKFDYNTEFSNHEIAFLSSIGDIFPIYDYIILEYISGVTILDSSSELI
ASYTLVQHLKEVITEIRRAVTSLGAKQVSNEHLERYLKELNRVQLFANEKWTSLQTDANRIDKRARLIEQHLIAKEKS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18348; Mature: 18217

Theoretical pI: Translated: 8.94; Mature: 8.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVACIQRLRRNITISPEQSYAGKAKQQLTNLKNKFDYNTEFSNHEIAFLSSIGDIFPIY
CCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH
DYIILEYISGVTILDSSSELIASYTLVQHLKEVITEIRRAVTSLGAKQVSNEHLERYLKE
HHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LNRVQLFANEKWTSLQTDANRIDKRARLIEQHLIAKEKS
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SVACIQRLRRNITISPEQSYAGKAKQQLTNLKNKFDYNTEFSNHEIAFLSSIGDIFPIY
CHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH
DYIILEYISGVTILDSSSELIASYTLVQHLKEVITEIRRAVTSLGAKQVSNEHLERYLKE
HHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LNRVQLFANEKWTSLQTDANRIDKRARLIEQHLIAKEKS
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA