| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189184035
Identifier: 189184035
GI number: 189184035
Start: 1159093
End: 1159950
Strand: Direct
Name: 189184035
Synonym: OTT_1128
Alternate gene names: NA
Gene position: 1159093-1159950 (Clockwise)
Preceding gene: 189184034
Following gene: 189184037
Centisome position: 57.7
GC content: 30.07
Gene sequence:
>858_bases TTGTTGTTTGAAGGAAATAGAGAAATAACAGAAGTGGAGTTTTTAGGAACTATATTAGATGCAGACATAGCGTCCAAAAA AGAATCAATAGTAGATGTTTTGTGTAAAGATAAAAACGGCGCGCAATATATAATAGAAATGCAAGTAGATCCTACACAAG GATTTGAAAAAAGAGCTCAGTATTATGCCGAAAAAGCATATGGTAGGCAACCAAATAGAGGAAAGGAAGGAAAATACTCA GACCTAAAGGAAGTTATATTTATAGCTATAGCAGATTATAAATTGTTTCCAAATAAAGAAGACTATATATCAAGGCATGT AATACTGGATAAAAAAACATATGAGCATGATTTAAAAGACTTTTCATTTACCTTTATAGAATTACCAAAATTTAAAAAAA ATAGAGTGGAAGAGTTAAATGATATAACAGAGAAGTGGTGCTATTTTTTTAAACATGCAAAAGAAACAACATTAGATGGA TATAATAAAATAATAGGTGAAGATTTAATAATAAAAAGAGCTTATGAAGCATTAGATCAGTTTAACTGGAGCGAAGATGA ACTAATAACCTATGAACAAGAGTTAAAGCGTATATGGGATAATAAAGCAGTCGAAGATTATAAACTCGAACGCGCTAAAG CTGAAGGTAAAGCTGAAGGCATAAAGCTAGGTGAGATTAAAGGTAAAGCTGAAGGCATAAAGCTAGGTGAGATTAAAGGT AAAGCTGAAGGTGAAGCTAAAGCAAAAAAAGATTTGGCAATAAAATTATTGAAATCTGAATTATCAGTTGAGACAATTGC TGAATATACGGATTTATCAATACAAGAAGTATTAAATTTAAAAAATAGTGTAAAATAA
Upstream 100 bases:
>100_bases TTTATCAAGATTTCTAGATCCAAAGAATGATGTAGCATTTAAAAAGATATTTGGATCAGAAAAAAACAAGGACATACTAA TACATTTTCTGAACGATATA
Downstream 100 bases:
>100_bases TAAGAAATATACAACATAAAATCTTACTTTTGATGTGTTGTATGCTACTTCTATTAGATGCTTTATATCACACTACAAGT TCTATACTATACTGAACATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 285; Mature: 285
Protein sequence:
>285_residues MLFEGNREITEVEFLGTILDADIASKKESIVDVLCKDKNGAQYIIEMQVDPTQGFEKRAQYYAEKAYGRQPNRGKEGKYS DLKEVIFIAIADYKLFPNKEDYISRHVILDKKTYEHDLKDFSFTFIELPKFKKNRVEELNDITEKWCYFFKHAKETTLDG YNKIIGEDLIIKRAYEALDQFNWSEDELITYEQELKRIWDNKAVEDYKLERAKAEGKAEGIKLGEIKGKAEGIKLGEIKG KAEGEAKAKKDLAIKLLKSELSVETIAEYTDLSIQEVLNLKNSVK
Sequences:
>Translated_285_residues MLFEGNREITEVEFLGTILDADIASKKESIVDVLCKDKNGAQYIIEMQVDPTQGFEKRAQYYAEKAYGRQPNRGKEGKYS DLKEVIFIAIADYKLFPNKEDYISRHVILDKKTYEHDLKDFSFTFIELPKFKKNRVEELNDITEKWCYFFKHAKETTLDG YNKIIGEDLIIKRAYEALDQFNWSEDELITYEQELKRIWDNKAVEDYKLERAKAEGKAEGIKLGEIKGKAEGIKLGEIKG KAEGEAKAKKDLAIKLLKSELSVETIAEYTDLSIQEVLNLKNSVK >Mature_285_residues MLFEGNREITEVEFLGTILDADIASKKESIVDVLCKDKNGAQYIIEMQVDPTQGFEKRAQYYAEKAYGRQPNRGKEGKYS DLKEVIFIAIADYKLFPNKEDYISRHVILDKKTYEHDLKDFSFTFIELPKFKKNRVEELNDITEKWCYFFKHAKETTLDG YNKIIGEDLIIKRAYEALDQFNWSEDELITYEQELKRIWDNKAVEDYKLERAKAEGKAEGIKLGEIKGKAEGIKLGEIKG KAEGEAKAKKDLAIKLLKSELSVETIAEYTDLSIQEVLNLKNSVK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32966; Mature: 32966
Theoretical pI: Translated: 5.14; Mature: 5.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLFEGNREITEVEFLGTILDADIASKKESIVDVLCKDKNGAQYIIEMQVDPTQGFEKRAQ CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHH YYAEKAYGRQPNRGKEGKYSDLKEVIFIAIADYKLFPNKEDYISRHVILDKKTYEHDLKD HHHHHHCCCCCCCCCCCCHHHHHHHHHHHEECCEECCCCHHHHHHHEEECCHHHHHHHHH FSFTFIELPKFKKNRVEELNDITEKWCYFFKHAKETTLDGYNKIIGEDLIIKRAYEALDQ CEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FNWSEDELITYEQELKRIWDNKAVEDYKLERAKAEGKAEGIKLGEIKGKAEGIKLGEIKG CCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEECCCCCCCCEEEECCCC KAEGEAKAKKDLAIKLLKSELSVETIAEYTDLSIQEVLNLKNSVK CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCC >Mature Secondary Structure MLFEGNREITEVEFLGTILDADIASKKESIVDVLCKDKNGAQYIIEMQVDPTQGFEKRAQ CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHH YYAEKAYGRQPNRGKEGKYSDLKEVIFIAIADYKLFPNKEDYISRHVILDKKTYEHDLKD HHHHHHCCCCCCCCCCCCHHHHHHHHHHHEECCEECCCCHHHHHHHEEECCHHHHHHHHH FSFTFIELPKFKKNRVEELNDITEKWCYFFKHAKETTLDGYNKIIGEDLIIKRAYEALDQ CEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FNWSEDELITYEQELKRIWDNKAVEDYKLERAKAEGKAEGIKLGEIKGKAEGIKLGEIKG CCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEECCCCCCCCEEEECCCC KAEGEAKAKKDLAIKLLKSELSVETIAEYTDLSIQEVLNLKNSVK CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA