Definition Orientia tsutsugamushi str. Ikeda, complete genome.
Accession NC_010793
Length 2,008,987

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The map label for this gene is pgpA [C]

Identifier: 189183981

GI number: 189183981

Start: 1102587

End: 1103183

Strand: Direct

Name: pgpA [C]

Synonym: OTT_1074

Alternate gene names: 189183981

Gene position: 1102587-1103183 (Clockwise)

Preceding gene: 189183979

Following gene: 189183982

Centisome position: 54.88

GC content: 27.3

Gene sequence:

>597_bases
ATGATTAAAATTGCAGAATTAATAGTAACTTTTTTTTATTTAGGGAAGGTTAAATTTGCTCCAGGGACATTAGGTTCGAT
AGTAGCTTTTCCATTAAGTTTATTAGTATATAGATATTTACCTGTATATGAATTTTATCAATTTAATATAACATTACTTG
CTATTGCAGTTGCGTTATTTATTGTTGGTAGTTTTTTTAGTCAGATATATATGGGATACTATGGGATACATGATCCTGGG
GAAATTATTATTGATGAAGTAGCTGGGCAAATACTGACTATTATACTTGTAATGCCGTTAATAAATCATATTAATTCAGT
GCTAATGTTTTTAGTAGAGTTACTGAGATTCACTGTAGTTTCTGTAACCAATTATTGCAGTATATGTGATATAAATTATG
TTAAGGAATTTAAGAATTATAATCTAGTGGTTTTATTGATATTGTCCTTATTATTTTTTAGATTGTGTGATATAGTTAAA
CCATGGCCTGTAGGTTTTATAGATCAGAATCTTAAAAATGGAATAGGAGTAATGTTAGATGATATTATTGCTGGATTAAT
GGCAGCGATAATGATATACATTTTTATCAAATTTTAG

Upstream 100 bases:

>100_bases
TTTTGTCATATAAGATTTTTAAGGAAGGTGTTGTGAATTTTGATTTTAGAGCTAAAGCATGAATAATAAATACTTTTTTT
TGAATGAATAAAAACTATAT

Downstream 100 bases:

>100_bases
ATGATACTAGTCGATAATTAATATTTTACTTTTGTTTTGTAGAATTAAAAATAAATTTTATGCAGTTGGATGATGCAGTA
ATTGCTCAAGTTAGAGAAAT

Product: phosphatidylglycerophosphatase A

Products: phosphatidylglycerol; phosphate

Alternate protein names: Phosphatidylglycerophosphatase A; Serine Hydroxymethyltransferase

Number of amino acids: Translated: 198; Mature: 198

Protein sequence:

>198_residues
MIKIAELIVTFFYLGKVKFAPGTLGSIVAFPLSLLVYRYLPVYEFYQFNITLLAIAVALFIVGSFFSQIYMGYYGIHDPG
EIIIDEVAGQILTIILVMPLINHINSVLMFLVELLRFTVVSVTNYCSICDINYVKEFKNYNLVVLLILSLLFFRLCDIVK
PWPVGFIDQNLKNGIGVMLDDIIAGLMAAIMIYIFIKF

Sequences:

>Translated_198_residues
MIKIAELIVTFFYLGKVKFAPGTLGSIVAFPLSLLVYRYLPVYEFYQFNITLLAIAVALFIVGSFFSQIYMGYYGIHDPG
EIIIDEVAGQILTIILVMPLINHINSVLMFLVELLRFTVVSVTNYCSICDINYVKEFKNYNLVVLLILSLLFFRLCDIVK
PWPVGFIDQNLKNGIGVMLDDIIAGLMAAIMIYIFIKF
>Mature_198_residues
MIKIAELIVTFFYLGKVKFAPGTLGSIVAFPLSLLVYRYLPVYEFYQFNITLLAIAVALFIVGSFFSQIYMGYYGIHDPG
EIIIDEVAGQILTIILVMPLINHINSVLMFLVELLRFTVVSVTNYCSICDINYVKEFKNYNLVVLLILSLLFFRLCDIVK
PWPVGFIDQNLKNGIGVMLDDIIAGLMAAIMIYIFIKF

Specific function: One Of The Three Phospholipid Phosphatases, Specifically Hydrolyzes Phosphatidylglycerophosphate. [C]

COG id: COG1267

COG function: function code I; Phosphatidylglycerophosphatase A and related proteins

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.1.3.27

Molecular weight: Translated: 22479; Mature: 22479

Theoretical pI: Translated: 5.68; Mature: 5.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKIAELIVTFFYLGKVKFAPGTLGSIVAFPLSLLVYRYLPVYEFYQFNITLLAIAVALF
CHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IVGSFFSQIYMGYYGIHDPGEIIIDEVAGQILTIILVMPLINHINSVLMFLVELLRFTVV
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SVTNYCSICDINYVKEFKNYNLVVLLILSLLFFRLCDIVKPWPVGFIDQNLKNGIGVMLD
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCHHHHHH
DIIAGLMAAIMIYIFIKF
HHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIKIAELIVTFFYLGKVKFAPGTLGSIVAFPLSLLVYRYLPVYEFYQFNITLLAIAVALF
CHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IVGSFFSQIYMGYYGIHDPGEIIIDEVAGQILTIILVMPLINHINSVLMFLVELLRFTVV
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SVTNYCSICDINYVKEFKNYNLVVLLILSLLFFRLCDIVKPWPVGFIDQNLKNGIGVMLD
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCHHHHHH
DIIAGLMAAIMIYIFIKF
HHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: phosphatidylglycerophosphate; H2O

Specific reaction: phosphatidylglycerophosphate + H2O = phosphatidylglycerol + phosphate

General reaction: Phosphoric ester hydrolysis [C]

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA