Definition Orientia tsutsugamushi str. Ikeda, complete genome.
Accession NC_010793
Length 2,008,987

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The map label for this gene is 189183922

Identifier: 189183922

GI number: 189183922

Start: 1059104

End: 1060426

Strand: Direct

Name: 189183922

Synonym: OTT_1015

Alternate gene names: NA

Gene position: 1059104-1060426 (Clockwise)

Preceding gene: 189183916

Following gene: 189183923

Centisome position: 52.72

GC content: 27.29

Gene sequence:

>1323_bases
ATGCATTTATGGTATCAAATTATACTTAGTGCAAATAATCAAGATTGCAGTTTGAGGTTTATGACCATACCATTTCTAAC
ATTAAAAATAGAAAACAGAGATGTAGATAAATTACATAACGTGCCATGTGACACTATAGATCTACAGTCTAGTAGCAGTA
GGCATACCGGGTACATACAATTTTCTTCAATTGATAACGTGTTTATATCTCATTTATCTAGGTTTAATGAAATTCGTTAT
CTTAATATTTCAGATATAGAGTTATATCTTGCAGGGTTTGATATTTTATCGAATTATTGTAATAATAATTTGACATCATT
AACTCTTGTTAATGATAAAATTGGATTAAAGAAAGTGCATAAGCATTGTATTGCCCCTACATCTGGTGCTGATATTCGTA
ATCCTATAAAAAAATTGTTAAATAATCTTCCTAACATATCCAAATTAAATATTGGTAATAATTCAATATCGCATGTTGCT
ATAAAACAAATCCTTGATTGTATTAATGAAAGTAATAAATTAAATATAATTTTGGATATATCATATAATATGCAAGAATC
AAGCAAATCATTTATATCTATCAAACCATTTATTTATCATCTTAAGCAAAATAGCTACAATTTATGGATGAACTCTATGA
GAAATTTTATGAAATGTGGTGGTACTTTAATAGTAGAACCTGATGCTTTAGTTTGTCATATTCATCAGGAAACATTAACG
TCAAATTTAGGACCAGGGATCTGTACTGATATGCATTTCTCTGATATGCAAATTTTGCATGAAAAAAATATAGATGGCAC
TATACCAATAAAAAGATTTATACCGCACAGTAGCCAATTAAACACTCAGGAAGATAATAATAGCGTTTCGAAAAAAGAAT
TATGCATAGATAATCAAAATTCTGATTGTACCTACACAGCTAGCACTAGTAGTATAGTGCAAAAAAGTGATGATGATTTA
ATAAGTGAATGTTTGGCTAATAATCCTAATATTAAAGAACAAATCAATAATATTCTTTCGGAAACAGAAATTAATAATAT
ACTTGCAACAACTTTTTCAACTTCAGAGCTTGATATTAATATAGCTGAAGATTATTTGAGCTATAGTGATAAACAAATTG
CCAATAATGATGCTATACAATCAAGCTTCAAGAGAAAAAGAGAAGATATTTACACTGAATTTTCTAATAAAAAAGCAAAT
TTCTCTTTAGAAGAGAGTCAAATATTGAACTTGGTAAATCAACATAGTAGTTTAAGTTCTGATTATAATATCAGTTTGTA
TGATAGTTATAATAAAAATTTGCATTATGAGTATAATTGCTAA

Upstream 100 bases:

>100_bases
TTTTTTCTTTACTGGAATTTTATCTATTTAAATCTTGATTAATATTAATATTTGTTTAATTATCTTCAAAAGTAGAGCAA
GTTAATTATGGGGGTGTTTT

Downstream 100 bases:

>100_bases
TTGAAGTATTATAATATATCTGATTTATAAACAATAGTATTGATCATGAATTGTCTTATGCAGCAAAAAATTACTCTTCA
GCAAAAAAAGGCTAAGCTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 440; Mature: 440

Protein sequence:

>440_residues
MHLWYQIILSANNQDCSLRFMTIPFLTLKIENRDVDKLHNVPCDTIDLQSSSSRHTGYIQFSSIDNVFISHLSRFNEIRY
LNISDIELYLAGFDILSNYCNNNLTSLTLVNDKIGLKKVHKHCIAPTSGADIRNPIKKLLNNLPNISKLNIGNNSISHVA
IKQILDCINESNKLNIILDISYNMQESSKSFISIKPFIYHLKQNSYNLWMNSMRNFMKCGGTLIVEPDALVCHIHQETLT
SNLGPGICTDMHFSDMQILHEKNIDGTIPIKRFIPHSSQLNTQEDNNSVSKKELCIDNQNSDCTYTASTSSIVQKSDDDL
ISECLANNPNIKEQINNILSETEINNILATTFSTSELDINIAEDYLSYSDKQIANNDAIQSSFKRKREDIYTEFSNKKAN
FSLEESQILNLVNQHSSLSSDYNISLYDSYNKNLHYEYNC

Sequences:

>Translated_440_residues
MHLWYQIILSANNQDCSLRFMTIPFLTLKIENRDVDKLHNVPCDTIDLQSSSSRHTGYIQFSSIDNVFISHLSRFNEIRY
LNISDIELYLAGFDILSNYCNNNLTSLTLVNDKIGLKKVHKHCIAPTSGADIRNPIKKLLNNLPNISKLNIGNNSISHVA
IKQILDCINESNKLNIILDISYNMQESSKSFISIKPFIYHLKQNSYNLWMNSMRNFMKCGGTLIVEPDALVCHIHQETLT
SNLGPGICTDMHFSDMQILHEKNIDGTIPIKRFIPHSSQLNTQEDNNSVSKKELCIDNQNSDCTYTASTSSIVQKSDDDL
ISECLANNPNIKEQINNILSETEINNILATTFSTSELDINIAEDYLSYSDKQIANNDAIQSSFKRKREDIYTEFSNKKAN
FSLEESQILNLVNQHSSLSSDYNISLYDSYNKNLHYEYNC
>Mature_440_residues
MHLWYQIILSANNQDCSLRFMTIPFLTLKIENRDVDKLHNVPCDTIDLQSSSSRHTGYIQFSSIDNVFISHLSRFNEIRY
LNISDIELYLAGFDILSNYCNNNLTSLTLVNDKIGLKKVHKHCIAPTSGADIRNPIKKLLNNLPNISKLNIGNNSISHVA
IKQILDCINESNKLNIILDISYNMQESSKSFISIKPFIYHLKQNSYNLWMNSMRNFMKCGGTLIVEPDALVCHIHQETLT
SNLGPGICTDMHFSDMQILHEKNIDGTIPIKRFIPHSSQLNTQEDNNSVSKKELCIDNQNSDCTYTASTSSIVQKSDDDL
ISECLANNPNIKEQINNILSETEINNILATTFSTSELDINIAEDYLSYSDKQIANNDAIQSSFKRKREDIYTEFSNKKAN
FSLEESQILNLVNQHSSLSSDYNISLYDSYNKNLHYEYNC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50170; Mature: 50170

Theoretical pI: Translated: 5.84; Mature: 5.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHLWYQIILSANNQDCSLRFMTIPFLTLKIENRDVDKLHNVPCDTIDLQSSSSRHTGYIQ
CCEEEEEEEECCCCCCEEEEEEEEEEEEEECCCCHHHHHCCCCCEEECCCCCCCCEEEEE
FSSIDNVFISHLSRFNEIRYLNISDIELYLAGFDILSNYCNNNLTSLTLVNDKIGLKKVH
ECCHHHHHHHHHHHHCCEEEEEECCEEEEEHHHHHHHHHHCCCCEEEEEECCCCCHHHHH
KHCIAPTSGADIRNPIKKLLNNLPNISKLNIGNNSISHVAIKQILDCINESNKLNIILDI
HHHCCCCCCCHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEEEE
SYNMQESSKSFISIKPFIYHLKQNSYNLWMNSMRNFMKCGGTLIVEPDALVCHIHQETLT
ECCCCCCCCCEEEECCEEEEECCCCHHHHHHHHHHHHHCCCEEEECCCEEEEEEEHHHHH
SNLGPGICTDMHFSDMQILHEKNIDGTIPIKRFIPHSSQLNTQEDNNSVSKKELCIDNQN
CCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCCCCCHHHHEECCCC
SDCTYTASTSSIVQKSDDDLISECLANNPNIKEQINNILSETEINNILATTFSTSELDIN
CCEEEEECCHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCEEEEEECCCEEEEE
IAEDYLSYSDKQIANNDAIQSSFKRKREDIYTEFSNKKANFSLEESQILNLVNQHSSLSS
EHHHHHCCCCCHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCC
DYNISLYDSYNKNLHYEYNC
CCEEEEEECCCCCEEEEECC
>Mature Secondary Structure
MHLWYQIILSANNQDCSLRFMTIPFLTLKIENRDVDKLHNVPCDTIDLQSSSSRHTGYIQ
CCEEEEEEEECCCCCCEEEEEEEEEEEEEECCCCHHHHHCCCCCEEECCCCCCCCEEEEE
FSSIDNVFISHLSRFNEIRYLNISDIELYLAGFDILSNYCNNNLTSLTLVNDKIGLKKVH
ECCHHHHHHHHHHHHCCEEEEEECCEEEEEHHHHHHHHHHCCCCEEEEEECCCCCHHHHH
KHCIAPTSGADIRNPIKKLLNNLPNISKLNIGNNSISHVAIKQILDCINESNKLNIILDI
HHHCCCCCCCHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEEEE
SYNMQESSKSFISIKPFIYHLKQNSYNLWMNSMRNFMKCGGTLIVEPDALVCHIHQETLT
ECCCCCCCCCEEEECCEEEEECCCCHHHHHHHHHHHHHCCCEEEECCCEEEEEEEHHHHH
SNLGPGICTDMHFSDMQILHEKNIDGTIPIKRFIPHSSQLNTQEDNNSVSKKELCIDNQN
CCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCCCCCHHHHEECCCC
SDCTYTASTSSIVQKSDDDLISECLANNPNIKEQINNILSETEINNILATTFSTSELDIN
CCEEEEECCHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCEEEEEECCCEEEEE
IAEDYLSYSDKQIANNDAIQSSFKRKREDIYTEFSNKKANFSLEESQILNLVNQHSSLSS
EHHHHHCCCCCHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCC
DYNISLYDSYNKNLHYEYNC
CCEEEEEECCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA