| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189183910
Identifier: 189183910
GI number: 189183910
Start: 1050531
End: 1050842
Strand: Direct
Name: 189183910
Synonym: OTT_1003
Alternate gene names: NA
Gene position: 1050531-1050842 (Clockwise)
Preceding gene: 189183907
Following gene: 189183911
Centisome position: 52.29
GC content: 28.21
Gene sequence:
>312_bases ATGAAAAAATGTATTATAACAGTATACTATTTAATAGACAATTTTTACAAGATATATCAAGAGTGGGAGAGAAAGAGATT AATACCAAGTAGTAATCAAACGAACAGAGATGGGAAGTTGTCCTTAGCTGAGTTATTAACAATAGCGATATATTTTTATG TATCTCAATGCAAGGATTGTAAAAATTATTATCTATATTACTTGAGTTATAAGTATAAAGGATACTTTTGCTTACCAAGC TATAGTAGAATAATACAACTGTTGCCTAGAATGTTGCTACCATTAGTCGTATTAATGCATTATCTGAAATGA
Upstream 100 bases:
>100_bases TTAGGATCAGTGGAAATATGAAATGTAGAGAATAAGAGGTATACAAAGAGAGAATGTTGAGTTATAAAAAAAAATTTAAA TAAACAAGGAATAACACAAC
Downstream 100 bases:
>100_bases GAAGAGACTGGTATATATTACATCGATTCTACAGAGTTAGCAATTTGTCATAATAAACGTACCTCCAGCAATAGAGTTTT TAACAAAATTTCTAAAATTG
Product: transposase
Products: NA
Alternate protein names: Transposase And Inactivated Derivative
Number of amino acids: Translated: 103; Mature: 103
Protein sequence:
>103_residues MKKCIITVYYLIDNFYKIYQEWERKRLIPSSNQTNRDGKLSLAELLTIAIYFYVSQCKDCKNYYLYYLSYKYKGYFCLPS YSRIIQLLPRMLLPLVVLMHYLK
Sequences:
>Translated_103_residues MKKCIITVYYLIDNFYKIYQEWERKRLIPSSNQTNRDGKLSLAELLTIAIYFYVSQCKDCKNYYLYYLSYKYKGYFCLPS YSRIIQLLPRMLLPLVVLMHYLK >Mature_103_residues MKKCIITVYYLIDNFYKIYQEWERKRLIPSSNQTNRDGKLSLAELLTIAIYFYVSQCKDCKNYYLYYLSYKYKGYFCLPS YSRIIQLLPRMLLPLVVLMHYLK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12584; Mature: 12584
Theoretical pI: Translated: 9.62; Mature: 9.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.9 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 3.9 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 6.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKCIITVYYLIDNFYKIYQEWERKRLIPSSNQTNRDGKLSLAELLTIAIYFYVSQCKDC CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH KNYYLYYLSYKYKGYFCLPSYSRIIQLLPRMLLPLVVLMHYLK HHHEEEEEEEEECEEEECCCHHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure MKKCIITVYYLIDNFYKIYQEWERKRLIPSSNQTNRDGKLSLAELLTIAIYFYVSQCKDC CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH KNYYLYYLSYKYKGYFCLPSYSRIIQLLPRMLLPLVVLMHYLK HHHEEEEEEEEECEEEECCCHHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA