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The map label for this gene is traA [H]

Identifier: 189183867

GI number: 189183867

Start: 1002399

End: 1004615

Strand: Direct

Name: traA [H]

Synonym: OTT_0960

Alternate gene names: 189183867

Gene position: 1002399-1004615 (Clockwise)

Preceding gene: 189183866

Following gene: 189183869

Centisome position: 49.9

GC content: 31.48

Gene sequence:

>2217_bases
ATGAAAAAGCTTAAAGAAGTAATTAATTCATATTTTGCTAAGTTAAGCTTATTAAATAGAGTTGATCAGATAGGTAGAGT
ACAGCAAGCTCAGATTAGGCCACCTATAATTAGAGGTTTAATTAATGAAATACTTAGAGAGGATTATTTAAAAATTGTTA
AAGATGTTGATGTAATAACTGATTCTATAACACATTATCAATCTATTTTTACTAAGCGGCATGTTGAAAAGGAAGTCAAA
GATATAAAAAACCAAACAGAAAGAGAAATGTTAGTTCAACAAGTGCTTAGTTCAAATAGGGTACTAGAATTATATCATGA
TGATGGTAAGATTAGCAAATATTTTACGACAGTTGAGGTTAGAAATGAGGAAGCAAGAATAATCAGAATGGCTAATAAAA
TCAATGATCAAGTTTATTACAAAGATATTTACAACCTTAAAAATGATATAGAAAGCCTGACCAATGTCAGTGAAGAGCAA
AAACAAGCTCTAAAACATATTCTGCTGAGTACTAGTGGAGTTAGAGTGCTAAGAGGAAGAGCTGGTACAGGTAAGTCTCA
TGTTTTAGCGGCAGTATACAAGCTTGCTATAAATTGTGGTCAGAATATCATTGGACTTGCTCCTACTCATAAGTCAGTGT
CAGAGCTGAAGAGTAAAGGTTATAAGGAGTGCAATACAATAAAAGGATTTTTATATAATCAAAGAAATACCGTTACTAAA
GACATCTTAATAGTAGTAGATAAAGCAGGAATGGTAGGTACTAGGGAGTATGCAGAGCTATTTAAGGTAGTTAGAAACAA
TAATTGTCAACTAATACTTGTTGGAGATGAAAGGCAGCTAGCTTCAGTAGAAAGAGGGGGAATGTTTGAGATACTAGCTA
ATACCTATGATTCACATGTTTTAACAGATGTTAGAAAGCAAAGTGAAAATTGGAGCAGGGAAGTAGCTGAAAAGTTTGCT
GAAGGTAATATTTTAAGCGGCATAACATTACTGAAACAAAACAACTGTATAGAGTTTGCTGATACATTGCAGGACTCAAT
GAATAAGTTAATATATGACTCGAGTCATGGCAAGTGTAAGCTACAAGAAAAATTAATAATTACAGTACGCAACAAGGACG
TTGATAAACTTAATTTGAATATCAGAAGCTTGTTAAAAGCTAATAGTACATTAAAAGGTCATGAATATAGCAGTTCAATT
GCTAAAAAACAAGAGTCTTATATGACTGGAGATAGAATTGTATTTCAAACAAGCAATAAAGACTTACAAATTGAAAACAG
TGAATTTGCAACTCTAGTATCAGTTAATAAAAATAAGTTTGTAGCTAAGACAGATACAGGAAAAGATGTTAGCTTTGATC
CAAGTAAAATCAATTTTAAACATGGTTATGCAAGTACTGTTTATAAGGCACACGGAGCTTCCATAAAAGATGTATATATT
CTTCATAATGGTGTAAGTAACATAAGTAGCTCATATACAGCTATGACAAGGCATGTAGAGAAATTACGTTTATATTGCAA
TAGGCAAGCTACTGAAAGTTTTAACAGTTTAATATATCAGATCAGCAACCCAAATGATAAATCAGCGAGCATAACCTTGA
AAACTGCTGAAGATTTGAAACAAGAGCAGAAACAGAAAAAAACGAATTATTTTAGTAAAATCTGTAATTGGGTTAAGTCT
GTAGTAACTGATATTAATGATAAATTTCATGTTAATGAAAAATATTACCAATTTACTTCTAAACCAGAGCAATTAGCTAC
AGTAAAAAGAGTACAGCAAGAGAATAGCATAAAACTACAGGCTGACAAAGATATTGCTACTCCATCATTTACGCAAATAA
AAGAACAAAGATGGTACGATTACGATGTAACGATTCTATCAGAAGAAGCAGCAATATTAAGTCTGCAGAAGGTAGGCATC
GATAGTAGAATGGTATATGTCTCAACTGTAAGTGATTTGAAGTACTATCAACCATTTCAAGGAGAAAAGATTCTTATAGC
TGCAAATAATGATAAACAAAATAAAGAATATGTAAGCACTATAAATGAGGTAGCTCAGATATTAGAAAAAAAAGGAGCAA
TCACTAGTATTGTAATGCCTTTAGAAGATAAAAATTTTAACGAAATGCTGAAAAATAAAGGTATGATAGCTGTTAAGGAG
CTTGTGATACCTGAAGTCATTAAATTAGTAAAAGTAGAATATCAAAACATACACTAA

Upstream 100 bases:

>100_bases
TGAGAATGGCGAAGGATTAGTTGATAAATCAGTAAATTTAAACACTCAAGGAGAGATGTAGCTAGCAAAATTTTTTTTGT
TCCAAAATTGGAGATGGTTC

Downstream 100 bases:

>100_bases
ACAGTGTAGTAGATGCAAAATGGAGTGGCATTTGCGCTACTAGTAGTTAGACTAAACAAGAACTACAAGCAGCTTTTGAT
CAAAATGCTGAACAATTAAA

Product: putative conjugative transfer protein TraA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 738; Mature: 738

Protein sequence:

>738_residues
MKKLKEVINSYFAKLSLLNRVDQIGRVQQAQIRPPIIRGLINEILREDYLKIVKDVDVITDSITHYQSIFTKRHVEKEVK
DIKNQTEREMLVQQVLSSNRVLELYHDDGKISKYFTTVEVRNEEARIIRMANKINDQVYYKDIYNLKNDIESLTNVSEEQ
KQALKHILLSTSGVRVLRGRAGTGKSHVLAAVYKLAINCGQNIIGLAPTHKSVSELKSKGYKECNTIKGFLYNQRNTVTK
DILIVVDKAGMVGTREYAELFKVVRNNNCQLILVGDERQLASVERGGMFEILANTYDSHVLTDVRKQSENWSREVAEKFA
EGNILSGITLLKQNNCIEFADTLQDSMNKLIYDSSHGKCKLQEKLIITVRNKDVDKLNLNIRSLLKANSTLKGHEYSSSI
AKKQESYMTGDRIVFQTSNKDLQIENSEFATLVSVNKNKFVAKTDTGKDVSFDPSKINFKHGYASTVYKAHGASIKDVYI
LHNGVSNISSSYTAMTRHVEKLRLYCNRQATESFNSLIYQISNPNDKSASITLKTAEDLKQEQKQKKTNYFSKICNWVKS
VVTDINDKFHVNEKYYQFTSKPEQLATVKRVQQENSIKLQADKDIATPSFTQIKEQRWYDYDVTILSEEAAILSLQKVGI
DSRMVYVSTVSDLKYYQPFQGEKILIAANNDKQNKEYVSTINEVAQILEKKGAITSIVMPLEDKNFNEMLKNKGMIAVKE
LVIPEVIKLVKVEYQNIH

Sequences:

>Translated_738_residues
MKKLKEVINSYFAKLSLLNRVDQIGRVQQAQIRPPIIRGLINEILREDYLKIVKDVDVITDSITHYQSIFTKRHVEKEVK
DIKNQTEREMLVQQVLSSNRVLELYHDDGKISKYFTTVEVRNEEARIIRMANKINDQVYYKDIYNLKNDIESLTNVSEEQ
KQALKHILLSTSGVRVLRGRAGTGKSHVLAAVYKLAINCGQNIIGLAPTHKSVSELKSKGYKECNTIKGFLYNQRNTVTK
DILIVVDKAGMVGTREYAELFKVVRNNNCQLILVGDERQLASVERGGMFEILANTYDSHVLTDVRKQSENWSREVAEKFA
EGNILSGITLLKQNNCIEFADTLQDSMNKLIYDSSHGKCKLQEKLIITVRNKDVDKLNLNIRSLLKANSTLKGHEYSSSI
AKKQESYMTGDRIVFQTSNKDLQIENSEFATLVSVNKNKFVAKTDTGKDVSFDPSKINFKHGYASTVYKAHGASIKDVYI
LHNGVSNISSSYTAMTRHVEKLRLYCNRQATESFNSLIYQISNPNDKSASITLKTAEDLKQEQKQKKTNYFSKICNWVKS
VVTDINDKFHVNEKYYQFTSKPEQLATVKRVQQENSIKLQADKDIATPSFTQIKEQRWYDYDVTILSEEAAILSLQKVGI
DSRMVYVSTVSDLKYYQPFQGEKILIAANNDKQNKEYVSTINEVAQILEKKGAITSIVMPLEDKNFNEMLKNKGMIAVKE
LVIPEVIKLVKVEYQNIH
>Mature_738_residues
MKKLKEVINSYFAKLSLLNRVDQIGRVQQAQIRPPIIRGLINEILREDYLKIVKDVDVITDSITHYQSIFTKRHVEKEVK
DIKNQTEREMLVQQVLSSNRVLELYHDDGKISKYFTTVEVRNEEARIIRMANKINDQVYYKDIYNLKNDIESLTNVSEEQ
KQALKHILLSTSGVRVLRGRAGTGKSHVLAAVYKLAINCGQNIIGLAPTHKSVSELKSKGYKECNTIKGFLYNQRNTVTK
DILIVVDKAGMVGTREYAELFKVVRNNNCQLILVGDERQLASVERGGMFEILANTYDSHVLTDVRKQSENWSREVAEKFA
EGNILSGITLLKQNNCIEFADTLQDSMNKLIYDSSHGKCKLQEKLIITVRNKDVDKLNLNIRSLLKANSTLKGHEYSSSI
AKKQESYMTGDRIVFQTSNKDLQIENSEFATLVSVNKNKFVAKTDTGKDVSFDPSKINFKHGYASTVYKAHGASIKDVYI
LHNGVSNISSSYTAMTRHVEKLRLYCNRQATESFNSLIYQISNPNDKSASITLKTAEDLKQEQKQKKTNYFSKICNWVKS
VVTDINDKFHVNEKYYQFTSKPEQLATVKRVQQENSIKLQADKDIATPSFTQIKEQRWYDYDVTILSEEAAILSLQKVGI
DSRMVYVSTVSDLKYYQPFQGEKILIAANNDKQNKEYVSTINEVAQILEKKGAITSIVMPLEDKNFNEMLKNKGMIAVKE
LVIPEVIKLVKVEYQNIH

Specific function: traI Has Been Identified As DNA Helicase I And It Also Has An Additional Activity Of Site-Specific Nicking At Orit. DNA Helicase I Is A Potent DNA-Dependent ATPase. [C]

COG id: COG0507

COG function: function code L; ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mobA/mobL family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000606
- InterPro:   IPR005053
- InterPro:   IPR014136 [H]

Pfam domain/function: PF03389 MobA_MobL; PF01443 Viral_helicase1 [H]

EC number: 3.6.1.- [C]

Molecular weight: Translated: 84298; Mature: 84298

Theoretical pI: Translated: 9.57; Mature: 9.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLKEVINSYFAKLSLLNRVDQIGRVQQAQIRPPIIRGLINEILREDYLKIVKDVDVIT
CHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
DSITHYQSIFTKRHVEKEVKDIKNQTEREMLVQQVLSSNRVLELYHDDGKISKYFTTVEV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEEEEEEE
RNEEARIIRMANKINDQVYYKDIYNLKNDIESLTNVSEEQKQALKHILLSTSGVRVLRGR
CCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEECC
AGTGKSHVLAAVYKLAINCGQNIIGLAPTHKSVSELKSKGYKECNTIKGFLYNQRNTVTK
CCCCHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCE
DILIVVDKAGMVGTREYAELFKVVRNNNCQLILVGDERQLASVERGGMFEILANTYDSHV
EEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEECCCHHHHHHHCCCHHHHHHHCCCHHH
LTDVRKQSENWSREVAEKFAEGNILSGITLLKQNNCIEFADTLQDSMNKLIYDSSHGKCK
HHHHHHHHHHHHHHHHHHHHCCCHHHCEEEEECCCCHHHHHHHHHHHHHHEECCCCCCEE
LQEKLIITVRNKDVDKLNLNIRSLLKANSTLKGHEYSSSIAKKQESYMTGDRIVFQTSNK
EEEEEEEEEECCCCCEECHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCC
DLQIENSEFATLVSVNKNKFVAKTDTGKDVSFDPSKINFKHGYASTVYKAHGASIKDVYI
CEEEECCCEEEEEEECCCEEEEECCCCCCCCCCCCCEEECCCCHHHHHHHCCCCCEEEEE
LHNGVSNISSSYTAMTRHVEKLRLYCNRQATESFNSLIYQISNPNDKSASITLKTAEDLK
EECCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHEEEECCCCCCCCEEEEECHHHHH
QEQKQKKTNYFSKICNWVKSVVTDINDKFHVNEKYYQFTSKPEQLATVKRVQQENSIKLQ
HHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCHHHHHHCCCHHHHHHHHHHHCCCCEEEE
ADKDIATPSFTQIKEQRWYDYDVTILSEEAAILSLQKVGIDSRMVYVSTVSDLKYYQPFQ
ECCCCCCCCHHHHHHHCCCEEEEEEEECCHHHHHHHHCCCCCEEEEEEEHHHHHHCCCCC
GEKILIAANNDKQNKEYVSTINEVAQILEKKGAITSIVMPLEDKNFNEMLKNKGMIAVKE
CCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHCCCCHHHHH
LVIPEVIKLVKVEYQNIH
HHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKKLKEVINSYFAKLSLLNRVDQIGRVQQAQIRPPIIRGLINEILREDYLKIVKDVDVIT
CHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
DSITHYQSIFTKRHVEKEVKDIKNQTEREMLVQQVLSSNRVLELYHDDGKISKYFTTVEV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEEEEEEE
RNEEARIIRMANKINDQVYYKDIYNLKNDIESLTNVSEEQKQALKHILLSTSGVRVLRGR
CCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEECC
AGTGKSHVLAAVYKLAINCGQNIIGLAPTHKSVSELKSKGYKECNTIKGFLYNQRNTVTK
CCCCHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCE
DILIVVDKAGMVGTREYAELFKVVRNNNCQLILVGDERQLASVERGGMFEILANTYDSHV
EEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEECCCHHHHHHHCCCHHHHHHHCCCHHH
LTDVRKQSENWSREVAEKFAEGNILSGITLLKQNNCIEFADTLQDSMNKLIYDSSHGKCK
HHHHHHHHHHHHHHHHHHHHCCCHHHCEEEEECCCCHHHHHHHHHHHHHHEECCCCCCEE
LQEKLIITVRNKDVDKLNLNIRSLLKANSTLKGHEYSSSIAKKQESYMTGDRIVFQTSNK
EEEEEEEEEECCCCCEECHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCC
DLQIENSEFATLVSVNKNKFVAKTDTGKDVSFDPSKINFKHGYASTVYKAHGASIKDVYI
CEEEECCCEEEEEEECCCEEEEECCCCCCCCCCCCCEEECCCCHHHHHHHCCCCCEEEEE
LHNGVSNISSSYTAMTRHVEKLRLYCNRQATESFNSLIYQISNPNDKSASITLKTAEDLK
EECCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHEEEECCCCCCCCEEEEECHHHHH
QEQKQKKTNYFSKICNWVKSVVTDINDKFHVNEKYYQFTSKPEQLATVKRVQQENSIKLQ
HHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCHHHHHHCCCHHHHHHHHHHHCCCCEEEE
ADKDIATPSFTQIKEQRWYDYDVTILSEEAAILSLQKVGIDSRMVYVSTVSDLKYYQPFQ
ECCCCCCCCHHHHHHHCCCEEEEEEEECCHHHHHHHHCCCCCEEEEEEEHHHHHHCCCCC
GEKILIAANNDKQNKEYVSTINEVAQILEKKGAITSIVMPLEDKNFNEMLKNKGMIAVKE
CCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHCCCCHHHHH
LVIPEVIKLVKVEYQNIH
HHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on acid anhydrides; In phosphorus-containing anhydrides [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8763954 [H]